Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:43:45 (508156): wrapper (7.7.26015): starting
18:43:45 (508156): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 18:43:45] Arguments: --nthreads 4
[2026-04-21 18:43:45] Threads: 4
[2026-04-21 18:43:45] Checking for CVMFS
[2026-04-21 18:43:45] No cvmfs_config command found, will try listing directly
[2026-04-21 18:43:45] CVMFS is ok
[2026-04-21 18:43:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 18:43:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 18:43:45] Further information can be found at the LHC@home message board.
[2026-04-21 18:43:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 18:43:45] Checking for apptainer binary...
[2026-04-21 18:43:45] which: no apptainer in ((null))
[2026-04-21 18:43:45] apptainer is not installed, using version from CVMFS
[2026-04-21 18:43:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 18:43:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-21 18:43:45] apptainer works
[2026-04-21 18:43:45] Set ATHENA_PROC_NUMBER=4
[2026-04-21 18:43:45] Set ATHENA_CORE_NUMBER=4
[2026-04-21 18:43:45] Starting ATLAS job with PandaID=7105158209
[2026-04-21 18:43:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 22:21:02]  *** The last 200 lines of the pilot log: ***
[2026-04-21 22:21:02] 2026-04-21 20:17:46,417 | INFO     | maximum number of monitored processes: 6
[2026-04-21 22:21:02] 2026-04-21 20:17:47,540 | INFO     | job 7105158209 has state=finished
[2026-04-21 22:21:02] 2026-04-21 20:17:47,541 | INFO     | preparing for final server update for job 7105158209 in state='finished'
[2026-04-21 22:21:02] 2026-04-21 20:17:48,193 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,194 | INFO     | reading metadata from: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7105158209/jobReport.json
[2026-04-21 22:21:02] 2026-04-21 20:17:48,196 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot124/slots/0/workernode_map.json
[2026-04-21 22:21:02] 2026-04-21 20:17:48,196 | INFO     | this job has now completed (state=finished)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,196 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,196 | INFO     | log transfer has been attempted: DONE
[2026-04-21 22:21:02] 2026-04-21 20:17:48,197 | INFO     | job 7105158209 has finished - writing final server update
[2026-04-21 22:21:02] 2026-04-21 20:17:48,197 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_10246/.job.ad'
[2026-04-21 22:21:02] 2026-04-21 20:17:48,197 | INFO     | total number of processed events: 400 (read)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,220 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7105158209/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,220 | INFO     | extracted standard info from prmon json
[2026-04-21 22:21:02] 2026-04-21 20:17:48,221 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 22:21:02] 2026-04-21 20:17:48,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 22:21:02] 2026-04-21 20:17:48,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 22:21:02] 2026-04-21 20:17:48,224 | INFO     | fitting pss+swap vs Time
[2026-04-21 22:21:02] 2026-04-21 20:17:48,225 | INFO     | sum of square deviations: 2871616632.5
[2026-04-21 22:21:02] 2026-04-21 20:17:48,226 | INFO     | sum of deviations: 10753753470.500002
[2026-04-21 22:21:02] 2026-04-21 20:17:48,226 | INFO     | mean x (centered): 0.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,226 | INFO     | mean y: 2376434.480952381
[2026-04-21 22:21:02] 2026-04-21 20:17:48,226 | INFO     | intersect: 2376434.480952381
[2026-04-21 22:21:02] 2026-04-21 20:17:48,227 | INFO     | chi2: 1.326122767436647
[2026-04-21 22:21:02] 2026-04-21 20:17:48,227 | INFO     | sum of square deviations: 2671343110.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,228 | INFO     | sum of deviations: 9989100262.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,228 | INFO     | mean x (centered): 0.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | mean y: 2375856.8292682925
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | intersect: 2375856.8292682925
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | chi2: 1.3256906607003807
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | current chi2=1.3256906607003807 (change=0.03258421820941257 %)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | right removable region: 204
[2026-04-21 22:21:02] 2026-04-21 20:17:48,229 | INFO     | sum of square deviations: 2671343110.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | sum of deviations: -13489766554.000006
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | mean x (centered): 0.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | mean y: 2394632.1414634148
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | intersect: 2394632.1414634148
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | chi2: 0.07526924138664762
[2026-04-21 22:21:02] 2026-04-21 20:17:48,231 | INFO     | current chi2=0.07526924138664762 (change=94.32411212333375 %)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,232 | INFO     | sum of square deviations: 2480604650.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,233 | INFO     | sum of deviations: -10964116423.5
[2026-04-21 22:21:02] 2026-04-21 20:17:48,233 | INFO     | mean x (centered): 0.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,233 | INFO     | mean y: 2392595.875
[2026-04-21 22:21:02] 2026-04-21 20:17:48,233 | INFO     | intersect: 2392595.875
[2026-04-21 22:21:02] 2026-04-21 20:17:48,233 | INFO     | chi2: 0.07004181911680722
[2026-04-21 22:21:02] 2026-04-21 20:17:48,234 | INFO     | current chi2=0.07004181911680722 (change=6.94496473398457 %)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,234 | INFO     | left removable region: 10
[2026-04-21 22:21:02] 2026-04-21 20:17:48,234 | INFO     | sum of square deviations: 2263977332.5
[2026-04-21 22:21:02] 2026-04-21 20:17:48,235 | INFO     | sum of deviations: -11191373235.000002
[2026-04-21 22:21:02] 2026-04-21 20:17:48,235 | INFO     | mean x (centered): 0.0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,235 | INFO     | mean y: 2392410.237113402
[2026-04-21 22:21:02] 2026-04-21 20:17:48,235 | INFO     | intersect: 2392410.237113402
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | chi2: 0.06831198494875707
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | current memory leak: -4.94 B/s (using 194 data points, chi2=0.07)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | could have reported an average CPU frequency of 2744 MHz (11 samples)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | ..............................
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | . Timing measurements:
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | . get job = 0 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,236 | INFO     | . initial setup = 7 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | . payload setup = 13 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | . stage-in = 0 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | . payload execution = 12788 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | . stage-out = 1 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | . log creation = 0 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,237 | INFO     | ..............................
[2026-04-21 22:21:02] 2026-04-21 20:17:48,327 | INFO     | 
[2026-04-21 22:21:02] 2026-04-21 20:17:48,327 | INFO     | job summary report
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | --------------------------------------------------
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | PanDA job id: 7105158209
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | task id: 49820375
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | errors: (none)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | pilot state: finished 
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | transexitcode: 0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | exeerrorcode: 0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | exeerrordiag: 
[2026-04-21 22:21:02] 2026-04-21 20:17:48,328 | INFO     | exitcode: 0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | exitmsg: OK
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | cpuconsumptiontime: 49269 s
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | nevents: 400
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | neventsw: 0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | pid: 526551
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | pgrp: 526551
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | corecount: 4
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | event service: False
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | sizes: {0: 2274625, 1: 2276454, 11: 2276454, 12806: 2307251, 12807: 2316273, 12808: 2316329, 12810: 2316651}
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | --------------------------------------------------
[2026-04-21 22:21:02] 2026-04-21 20:17:48,329 | INFO     | 
[2026-04-21 22:21:02] 2026-04-21 20:17:48,330 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-04-21 22:21:02] 2026-04-21 20:17:48,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 22:21:02] 2026-04-21 20:17:48,360 | INFO     | job 7105158209 has completed (purged errors)
[2026-04-21 22:21:02] 2026-04-21 20:17:48,360 | INFO     | overall cleanup function is called
[2026-04-21 22:21:02] 2026-04-21 20:17:49,370 | INFO     | --- collectZombieJob: --- 10, [526551]
[2026-04-21 22:21:02] 2026-04-21 20:17:49,370 | INFO     | zombie collector waiting for pid 526551
[2026-04-21 22:21:02] 2026-04-21 20:17:49,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 22:21:02] 2026-04-21 20:17:49,370 | INFO     | collected zombie processes
[2026-04-21 22:21:02] 2026-04-21 20:17:49,370 | INFO     | will attempt to kill all subprocesses of pid=526551
[2026-04-21 22:21:02] 2026-04-21 20:17:49,891 | INFO     | process IDs to be killed: [526551] (in reverse order)
[2026-04-21 22:21:02] 2026-04-21 20:17:50,106 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 22:21:02] 2026-04-21 20:17:50,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 22:21:02] 2026-04-21 20:17:50,133 | INFO     | did not find any defunct processes belonging to 526551
[2026-04-21 22:21:02] 2026-04-21 20:17:50,154 | INFO     | did not find any defunct processes belonging to 526551
[2026-04-21 22:21:02] 2026-04-21 20:17:50,154 | INFO     | Ready for new job
[2026-04-21 22:21:02] 2026-04-21 20:17:50,156 | INFO     | **************************************
[2026-04-21 22:21:02] 2026-04-21 20:17:50,156 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 22:21:02] 2026-04-21 20:17:50,156 | INFO     | **************************************
[2026-04-21 22:21:02] 2026-04-21 20:17:50,157 | INFO     | 
[2026-04-21 22:21:02] 2026-04-21 20:17:50,164 | INFO     | architecture information:
[2026-04-21 22:21:02] 2026-04-21 20:17:50,165 | INFO     | executing command: cat /etc/os-release
[2026-04-21 22:21:02] 2026-04-21 20:17:50,187 | INFO     | cat /etc/os-release:
[2026-04-21 22:21:02] NAME="CentOS Linux"
[2026-04-21 22:21:02] VERSION="7 (Core)"
[2026-04-21 22:21:02] ID="centos"
[2026-04-21 22:21:02] ID_LIKE="rhel fedora"
[2026-04-21 22:21:02] VERSION_ID="7"
[2026-04-21 22:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 22:21:02] ANSI_COLOR="0;31"
[2026-04-21 22:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 22:21:02] HOME_URL="https://www.centos.org/"
[2026-04-21 22:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 22:21:02] 
[2026-04-21 22:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 22:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 22:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 22:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 22:21:02] 
[2026-04-21 22:21:02] 2026-04-21 20:17:50,188 | INFO     | **************************************
[2026-04-21 22:21:02] 2026-04-21 20:17:50,694 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-04-21 22:21:02] 2026-04-21 20:17:50,713 | INFO     | sufficient remaining disk space (149434662912 B)
[2026-04-21 22:21:02] 2026-04-21 20:17:50,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 22:21:02] 2026-04-21 20:17:50,713 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 22:21:02] 2026-04-21 20:17:50,713 | INFO     | update_server=False
[2026-04-21 22:21:02] 2026-04-21 20:17:50,714 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 22:21:02] 2026-04-21 20:17:50,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 22:21:02] 2026-04-21 20:17:50,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 22:21:02] 2026-04-21 20:17:50,715 | INFO     | aborting loop
[2026-04-21 22:21:02] 2026-04-21 20:17:50,739 | INFO     | all job control threads have been joined
[2026-04-21 22:21:02] 2026-04-21 20:17:51,528 | INFO     | all payload control threads have been joined
[2026-04-21 22:21:02] 2026-04-21 20:17:51,711 | INFO     | all data control threads have been joined
[2026-04-21 22:21:02] 2026-04-21 20:17:51,719 | INFO     | [job] retrieve thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:51,720 | INFO     | [job] job monitor thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:51,744 | INFO     | [job] control thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:51,898 | INFO     | [payload] failed_post thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,006 | INFO     | [job] validate thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,070 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 22:21:02] 2026-04-21 20:17:52,307 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,531 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,533 | INFO     | [payload] control thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,706 | INFO     | [data] copytool_in thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,716 | INFO     | [data] control thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,720 | INFO     | [data] copytool_out thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:52,897 | INFO     | [payload] validate_post thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:53,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 22:21:02] 2026-04-21 20:17:54,343 | INFO     | [job] queue monitor thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:17:56,118 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:18:01,525 | INFO     | job.realtimelogging is not enabled
[2026-04-21 22:21:02] 2026-04-21 20:18:02,530 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 22:21:02] 2026-04-21 20:18:20,850 | INFO     | PID=514454 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 22:21:02] 2026-04-21 20:18:20,850 | INFO     | .. there are 10 such processes running
[2026-04-21 22:21:02] 2026-04-21 20:18:20,851 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 22:21:02] 2026-04-21 20:18:20,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 22:21:02] 2026-04-21 20:18:20,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 22:21:02] 2026-04-21 20:18:25,834 | INFO     | [monitor] cgroup control has ended
[2026-04-21 22:21:02] 2026-04-21 20:18:27,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423149807424)>', '<ExcThread(monitor, started 22422911989504)>']
[2026-04-21 22:21:02] 2026-04-21 20:18:27,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 22:21:02] 2026-04-21 20:18:27,885 | INFO     | [monitor] control thread has ended
[2026-04-21 22:21:02] 2026-04-21 20:18:32,789 | INFO     | all workflow threads have been joined
[2026-04-21 22:21:02] 2026-04-21 20:18:32,789 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 22:21:02] 2026-04-21 20:18:32,790 | INFO     | traces error code: 0
[2026-04-21 22:21:02] 2026-04-21 20:18:32,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 22:21:02] 2026-04-21 20:18:32,980 [wrapper] ==== pilot stdout END ====
[2026-04-21 22:21:02] 2026-04-21 20:18:32,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 22:21:02] 2026-04-21 20:18:32,989 [wrapper] pilotpid: 514454
[2026-04-21 22:21:02] 2026-04-21 20:18:32,992 [wrapper] Pilot exit status: 0
[2026-04-21 22:21:02] 2026-04-21 20:18:33,008 [wrapper] pandaids: 7105158209
[2026-04-21 22:21:02] 2026-04-21 20:18:33,188 [wrapper] cleanup supervisor_pilot  839073 514455
[2026-04-21 22:21:02] 2026-04-21 20:18:33,193 [wrapper] Test setup, not cleaning
[2026-04-21 22:21:02] 2026-04-21 20:18:33,197 [wrapper] apfmon messages muted
[2026-04-21 22:21:02] 2026-04-21 20:18:33,201 [wrapper] ==== wrapper stdout END ====
[2026-04-21 22:21:02] 2026-04-21 20:18:33,204 [wrapper] ==== wrapper stderr END ====
[2026-04-21 22:21:02]  *** Error codes and diagnostics ***
[2026-04-21 22:21:02]     "exeErrorCode": 0,
[2026-04-21 22:21:02]     "pilotErrorCode": 0,
[2026-04-21 22:21:02]  *** Listing of results directory ***
[2026-04-21 22:21:02] total 2455644
[2026-04-21 22:21:02] -rwx------. 1 boinc boinc      36322 Apr 21 09:44 runpilot2-wrapper.sh
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:07 queuedata.json
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc        100 Apr 21 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 22:21:02] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 18:43 run_atlas
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc        105 Apr 21 18:43 job.xml
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc       6541 Apr 21 18:43 init_data.xml
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc 2228939427 Apr 21 18:43 EVNT.49820373._000040.pool.root.1
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc     656940 Apr 21 18:43 input.tar.gz
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc      15665 Apr 21 18:43 start_atlas.sh
[2026-04-21 22:21:02] drwxrwx--x. 2 boinc boinc       4096 Apr 21 18:43 shared
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc          0 Apr 21 18:43 boinc_lockfile
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc       2586 Apr 21 18:43 pandaJob.out
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc     994990 Apr 21 18:43 agis_schedconf.cvmfs.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc        444 Apr 21 18:44 workernode_map.json
[2026-04-21 22:21:02] drwx------. 5 boinc boinc       4096 Apr 21 18:44 pilot3
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc  278444702 Apr 21 22:17 HITS.49820375._010228.pool.root.1
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc        487 Apr 21 22:17 boinc_task_state.xml
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc       1028 Apr 21 22:17 memory_monitor_summary.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc    1509089 Apr 21 22:17 agis_ddmendpoints.agis.ALL.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc     383401 Apr 21 22:17 log.49820375._010228.job.log.tgz.1
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc       6377 Apr 21 22:17 heartbeat_new.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc       6268 Apr 21 22:17 heartbeat.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc         95 Apr 21 22:18 pilot_heartbeat.json
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc       4902 Apr 21 22:18 pilotlog.txt
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc    1188346 Apr 21 22:18 log.49820375._010228.job.log.1
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc        357 Apr 21 22:18 output.list
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc        410 Apr 21 22:18 runtime_log
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc    1587200 Apr 21 22:18 result.tar.gz
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc       8844 Apr 21 22:18 runtime_log.err
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc        666 Apr 21 22:18 2aec3501467e.diag
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc         26 Apr 21 22:20 wrapper_checkpoint.txt
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc       8192 Apr 21 22:21 boinc_mmap_file
[2026-04-21 22:21:02] -rw-r--r--. 1 boinc boinc      21004 Apr 21 22:21 stderr.txt
[2026-04-21 22:21:02] HITS file was successfully produced:
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc 278444702 Apr 21 22:17 shared/HITS.pool.root.1
[2026-04-21 22:21:02]  *** Contents of shared directory: ***
[2026-04-21 22:21:02] total 2450840
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc 2228939427 Apr 21 18:43 ATLAS.root_0
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc     656940 Apr 21 18:43 input.tar.gz
[2026-04-21 22:21:02] -rw-r--r--. 2 boinc boinc      15665 Apr 21 18:43 start_atlas.sh
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc  278444702 Apr 21 22:17 HITS.pool.root.1
[2026-04-21 22:21:02] -rw-------. 1 boinc boinc    1587200 Apr 21 22:18 result.tar.gz
22:21:03 (508156): run_atlas exited; CPU time 50049.425914
22:21:03 (508156): called boinc_finish(0)

</stderr_txt>
]]>

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