Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:35:39 (1107432): wrapper (7.7.26015): starting
12:35:39 (1107432): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 12:35:39] Arguments: --nthreads 4
[2026-04-21 12:35:39] Threads: 4
[2026-04-21 12:35:39] Checking for CVMFS
[2026-04-21 12:35:39] No cvmfs_config command found, will try listing directly
[2026-04-21 12:35:39] CVMFS is ok
[2026-04-21 12:35:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 12:35:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 12:35:39] Further information can be found at the LHC@home message board.
[2026-04-21 12:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 12:35:39] Checking for apptainer binary...
[2026-04-21 12:35:39] which: no apptainer in ((null))
[2026-04-21 12:35:39] apptainer is not installed, using version from CVMFS
[2026-04-21 12:35:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 12:35:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-04-21 12:35:39] apptainer works
[2026-04-21 12:35:39] Set ATHENA_PROC_NUMBER=4
[2026-04-21 12:35:39] Set ATHENA_CORE_NUMBER=4
[2026-04-21 12:35:39] Starting ATLAS job with PandaID=7104802135
[2026-04-21 12:35:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 17:16:10]  *** The last 200 lines of the pilot log: ***
[2026-04-21 17:16:10] 2026-04-21 15:14:35,909 | INFO     |  -- lfn=log.49820244._011873.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 17:16:10] 2026-04-21 15:14:35,909 | INFO     | stage-out finished correctly
[2026-04-21 17:16:10] 2026-04-21 15:14:36,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 17:16:10] 2026-04-21 15:14:36,806 | INFO     | job 7104802135 has state=finished
[2026-04-21 17:16:10] 2026-04-21 15:14:36,807 | INFO     | preparing for final server update for job 7104802135 in state='finished'
[2026-04-21 17:16:10] 2026-04-21 15:14:36,807 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7104802135/jobReport.json
[2026-04-21 17:16:10] 2026-04-21 15:14:36,809 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/1/workernode_map.json
[2026-04-21 17:16:10] 2026-04-21 15:14:36,810 | INFO     | this job has now completed (state=finished)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,810 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,810 | INFO     | log transfer has been attempted: DONE
[2026-04-21 17:16:10] 2026-04-21 15:14:36,810 | INFO     | job 7104802135 has finished - writing final server update
[2026-04-21 17:16:10] 2026-04-21 15:14:36,811 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4189/.job.ad'
[2026-04-21 17:16:10] 2026-04-21 15:14:36,811 | INFO     | total number of processed events: 400 (read)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,823 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7104802135/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,824 | INFO     | extracted standard info from prmon json
[2026-04-21 17:16:10] 2026-04-21 15:14:36,824 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 17:16:10] 2026-04-21 15:14:36,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 17:16:10] 2026-04-21 15:14:36,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 17:16:10] 2026-04-21 15:14:36,829 | INFO     | fitting pss+swap vs Time
[2026-04-21 17:16:10] 2026-04-21 15:14:36,830 | INFO     | sum of square deviations: 6378584712.5
[2026-04-21 17:16:10] 2026-04-21 15:14:36,832 | INFO     | sum of deviations: 19929315002.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,832 | INFO     | mean x (centered): 0.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,832 | INFO     | mean y: 2367439.7518248176
[2026-04-21 17:16:10] 2026-04-21 15:14:36,833 | INFO     | intersect: 2367439.7518248176
[2026-04-21 17:16:10] 2026-04-21 15:14:36,833 | INFO     | chi2: 1.17789255652151
[2026-04-21 17:16:10] 2026-04-21 15:14:36,834 | INFO     | sum of square deviations: 6035722470.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,835 | INFO     | sum of deviations: 19149857978.000015
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | mean x (centered): 0.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | mean y: 2367094.215613383
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | intersect: 2367094.215613383
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | chi2: 1.178036506763272
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | current chi2=1.178036506763272 (change=-0.012220999357299268 %)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,836 | INFO     | right removable region: 268
[2026-04-21 17:16:10] 2026-04-21 15:14:36,837 | INFO     | sum of square deviations: 6035722470.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,839 | INFO     | sum of deviations: -10796380057.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,839 | INFO     | mean x (centered): 0.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,839 | INFO     | mean y: 2380965.8847583644
[2026-04-21 17:16:10] 2026-04-21 15:14:36,839 | INFO     | intersect: 2380965.8847583644
[2026-04-21 17:16:10] 2026-04-21 15:14:36,840 | INFO     | chi2: 0.027111669327987607
[2026-04-21 17:16:10] 2026-04-21 15:14:36,840 | INFO     | current chi2=0.027111669327987607 (change=97.69829012180429 %)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,840 | INFO     | sum of square deviations: 5705372090.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,842 | INFO     | sum of deviations: -8849243922.500002
[2026-04-21 17:16:10] 2026-04-21 15:14:36,842 | INFO     | mean x (centered): 0.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,842 | INFO     | mean y: 2380063.768939394
[2026-04-21 17:16:10] 2026-04-21 15:14:36,842 | INFO     | intersect: 2380063.768939394
[2026-04-21 17:16:10] 2026-04-21 15:14:36,843 | INFO     | chi2: 0.025877360707886075
[2026-04-21 17:16:10] 2026-04-21 15:14:36,843 | INFO     | current chi2=0.025877360707886075 (change=4.552683957484482 %)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,843 | INFO     | left removable region: 10
[2026-04-21 17:16:10] 2026-04-21 15:14:36,843 | INFO     | sum of square deviations: 5325139844.5
[2026-04-21 17:16:10] 2026-04-21 15:14:36,845 | INFO     | sum of deviations: -9105422328.5
[2026-04-21 17:16:10] 2026-04-21 15:14:36,845 | INFO     | mean x (centered): 0.0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,846 | INFO     | mean y: 2379942.065891473
[2026-04-21 17:16:10] 2026-04-21 15:14:36,846 | INFO     | intersect: 2379942.065891473
[2026-04-21 17:16:10] 2026-04-21 15:14:36,846 | INFO     | chi2: 0.025438212740572484
[2026-04-21 17:16:10] 2026-04-21 15:14:36,846 | INFO     | current memory leak: -1.71 B/s (using 258 data points, chi2=0.03)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | could have reported an average CPU frequency of 2980 MHz (13 samples)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | ..............................
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | . Timing measurements:
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | . get job = 0 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | . initial setup = 5 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,847 | INFO     | . payload setup = 8 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,848 | INFO     | . stage-in = 0 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,848 | INFO     | . payload execution = 16696 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,848 | INFO     | . stage-out = 1 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,848 | INFO     | . log creation = 0 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,848 | INFO     | ..............................
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | 
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | job summary report
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | --------------------------------------------------
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | PanDA job id: 7104802135
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | task id: 49820244
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | errors: (none)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,945 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | pilot state: finished 
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | transexitcode: 0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | exeerrorcode: 0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | exeerrordiag: 
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | exitcode: 0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | exitmsg: OK
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | cpuconsumptiontime: 65208 s
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | nevents: 400
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | neventsw: 0
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | pid: 1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | pgrp: 1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:36,946 | INFO     | corecount: 4
[2026-04-21 17:16:10] 2026-04-21 15:14:36,947 | INFO     | event service: False
[2026-04-21 17:16:10] 2026-04-21 15:14:36,947 | INFO     | sizes: {0: 2281567, 1: 2283396, 12: 2283396, 16708: 2315148, 16711: 2317246, 16712: 2317384}
[2026-04-21 17:16:10] 2026-04-21 15:14:36,947 | INFO     | --------------------------------------------------
[2026-04-21 17:16:10] 2026-04-21 15:14:36,947 | INFO     | 
[2026-04-21 17:16:10] 2026-04-21 15:14:36,947 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-04-21 17:16:10] 2026-04-21 15:14:36,968 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,970 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 17:16:10] 2026-04-21 15:14:36,971 | INFO     | job 7104802135 has completed (purged errors)
[2026-04-21 17:16:10] 2026-04-21 15:14:36,971 | INFO     | overall cleanup function is called
[2026-04-21 17:16:10] 2026-04-21 15:14:37,980 | INFO     | --- collectZombieJob: --- 10, [1116146]
[2026-04-21 17:16:10] 2026-04-21 15:14:37,981 | INFO     | zombie collector waiting for pid 1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:37,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 17:16:10] 2026-04-21 15:14:37,981 | INFO     | collected zombie processes
[2026-04-21 17:16:10] 2026-04-21 15:14:37,981 | INFO     | will attempt to kill all subprocesses of pid=1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:38,338 | INFO     | process IDs to be killed: [1116146] (in reverse order)
[2026-04-21 17:16:10] 2026-04-21 15:14:38,458 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 17:16:10] 2026-04-21 15:14:38,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 17:16:10] 2026-04-21 15:14:38,472 | INFO     | did not find any defunct processes belonging to 1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:38,485 | INFO     | did not find any defunct processes belonging to 1116146
[2026-04-21 17:16:10] 2026-04-21 15:14:38,485 | INFO     | Ready for new job
[2026-04-21 17:16:10] 2026-04-21 15:14:38,488 | INFO     | **************************************
[2026-04-21 17:16:10] 2026-04-21 15:14:38,488 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 17:16:10] 2026-04-21 15:14:38,488 | INFO     | **************************************
[2026-04-21 17:16:10] 2026-04-21 15:14:38,488 | INFO     | 
[2026-04-21 17:16:10] 2026-04-21 15:14:38,492 | INFO     | architecture information:
[2026-04-21 17:16:10] 2026-04-21 15:14:38,493 | INFO     | executing command: cat /etc/os-release
[2026-04-21 17:16:10] 2026-04-21 15:14:38,509 | INFO     | cat /etc/os-release:
[2026-04-21 17:16:10] NAME="CentOS Linux"
[2026-04-21 17:16:10] VERSION="7 (Core)"
[2026-04-21 17:16:10] ID="centos"
[2026-04-21 17:16:10] ID_LIKE="rhel fedora"
[2026-04-21 17:16:10] VERSION_ID="7"
[2026-04-21 17:16:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 17:16:10] ANSI_COLOR="0;31"
[2026-04-21 17:16:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 17:16:10] HOME_URL="https://www.centos.org/"
[2026-04-21 17:16:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 17:16:10] 
[2026-04-21 17:16:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 17:16:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 17:16:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 17:16:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 17:16:10] 
[2026-04-21 17:16:10] 2026-04-21 15:14:38,510 | INFO     | **************************************
[2026-04-21 17:16:10] 2026-04-21 15:14:39,013 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-04-21 17:16:10] 2026-04-21 15:14:39,029 | INFO     | sufficient remaining disk space (14881390592 B)
[2026-04-21 17:16:10] 2026-04-21 15:14:39,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 17:16:10] 2026-04-21 15:14:39,029 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 17:16:10] 2026-04-21 15:14:39,030 | INFO     | update_server=False
[2026-04-21 17:16:10] 2026-04-21 15:14:39,030 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 17:16:10] 2026-04-21 15:14:39,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 17:16:10] 2026-04-21 15:14:39,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 17:16:10] 2026-04-21 15:14:39,031 | INFO     | aborting loop
[2026-04-21 17:16:10] 2026-04-21 15:14:39,683 | INFO     | all data control threads have been joined
[2026-04-21 17:16:10] 2026-04-21 15:14:39,993 | INFO     | all payload control threads have been joined
[2026-04-21 17:16:10] 2026-04-21 15:14:40,035 | INFO     | [job] retrieve thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,036 | INFO     | [job] job monitor thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,087 | INFO     | [payload] failed_post thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,190 | INFO     | [job] validate thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,631 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,689 | INFO     | [data] control thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,700 | INFO     | all job control threads have been joined
[2026-04-21 17:16:10] 2026-04-21 15:14:40,756 | INFO     | [payload] validate_post thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,840 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:40,996 | INFO     | [payload] control thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:41,012 | INFO     | [data] copytool_in thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:41,036 | INFO     | [data] copytool_out thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:41,318 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:41,705 | INFO     | [job] control thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:41,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 17:16:10] 2026-04-21 15:14:42,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 17:16:10] 2026-04-21 15:14:42,959 | INFO     | [job] queue monitor thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:14:46,101 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 17:16:10] 2026-04-21 15:15:08,706 | INFO     | PID=1111268 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 17:16:10] 2026-04-21 15:15:08,706 | INFO     | .. there are 8 such processes running
[2026-04-21 17:16:10] 2026-04-21 15:15:08,707 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 17:16:10] 2026-04-21 15:15:08,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 17:16:10] 2026-04-21 15:15:08,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 17:16:10] 2026-04-21 15:15:17,019 | INFO     | [monitor] cgroup control has ended
[2026-04-21 17:16:10] 2026-04-21 15:15:18,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22624296421184)>', '<ExcThread(monitor, started 22624043517696)>']
[2026-04-21 17:16:10] 2026-04-21 15:15:18,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 17:16:10] 2026-04-21 15:15:18,756 | INFO     | [monitor] control thread has ended
[2026-04-21 17:16:10] 2026-04-21 15:15:23,034 | INFO     | all workflow threads have been joined
[2026-04-21 17:16:10] 2026-04-21 15:15:23,034 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 17:16:10] 2026-04-21 15:15:23,034 | INFO     | traces error code: 0
[2026-04-21 17:16:10] 2026-04-21 15:15:23,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 17:16:10] 2026-04-21 15:15:23,182 [wrapper] ==== pilot stdout END ====
[2026-04-21 17:16:10] 2026-04-21 15:15:23,185 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 17:16:10] 2026-04-21 15:15:23,187 [wrapper] pilotpid: 1111268
[2026-04-21 17:16:10] 2026-04-21 15:15:23,190 [wrapper] Pilot exit status: 0
[2026-04-21 17:16:10] 2026-04-21 15:15:23,199 [wrapper] pandaids: 7104802135
[2026-04-21 17:16:10] 2026-04-21 15:15:23,270 [wrapper] cleanup supervisor_pilot 1334787 1111269
[2026-04-21 17:16:10] 2026-04-21 15:15:23,273 [wrapper] Test setup, not cleaning
[2026-04-21 17:16:10] 2026-04-21 15:15:23,276 [wrapper] apfmon messages muted
[2026-04-21 17:16:10] 2026-04-21 15:15:23,278 [wrapper] ==== wrapper stdout END ====
[2026-04-21 17:16:10] 2026-04-21 15:15:23,281 [wrapper] ==== wrapper stderr END ====
[2026-04-21 17:16:10]  *** Error codes and diagnostics ***
[2026-04-21 17:16:10]     "exeErrorCode": 0,
[2026-04-21 17:16:10]     "pilotErrorCode": 0,
[2026-04-21 17:16:10]  *** Listing of results directory ***
[2026-04-21 17:16:10] total 2472916
[2026-04-21 17:16:10] -rwx------. 1 boinc boinc      36322 Apr 21 09:44 runpilot2-wrapper.sh
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:07 queuedata.json
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc        100 Apr 21 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 17:16:10] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 12:03 run_atlas
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc        105 Apr 21 12:03 job.xml
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc       6480 Apr 21 12:35 init_data.xml
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc 2247923933 Apr 21 12:35 EVNT.49820242._000016.pool.root.1
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:35 start_atlas.sh
[2026-04-21 17:16:10] drwxrwx--x. 2 boinc boinc       4096 Apr 21 12:35 shared
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:35 input.tar.gz
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc          0 Apr 21 12:35 boinc_lockfile
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc       2551 Apr 21 12:35 pandaJob.out
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc     995858 Apr 21 12:35 agis_schedconf.cvmfs.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc        452 Apr 21 12:35 workernode_map.json
[2026-04-21 17:16:10] drwx------. 5 boinc boinc       4096 Apr 21 12:35 pilot3
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc  276189048 Apr 21 17:13 HITS.49820244._011873.pool.root.1
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc        488 Apr 21 17:14 boinc_task_state.xml
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc         95 Apr 21 17:14 pilot_heartbeat.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc       1035 Apr 21 17:14 memory_monitor_summary.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc    1509089 Apr 21 17:14 agis_ddmendpoints.agis.ALL.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc     502717 Apr 21 17:14 log.49820244._011873.job.log.tgz.1
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc       6421 Apr 21 17:14 heartbeat_new.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc       6312 Apr 21 17:14 heartbeat.json
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc       4827 Apr 21 17:15 pilotlog.txt
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc    1545033 Apr 21 17:15 log.49820244._011873.job.log.1
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc        357 Apr 21 17:15 output.list
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc        410 Apr 21 17:15 runtime_log
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc    2068480 Apr 21 17:15 result.tar.gz
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc       8827 Apr 21 17:15 runtime_log.err
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc        664 Apr 21 17:15 2ae0372c9e97.diag
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc         27 Apr 21 17:15 wrapper_checkpoint.txt
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc       8192 Apr 21 17:16 boinc_mmap_file
[2026-04-21 17:16:10] -rw-r--r--. 1 boinc boinc      21044 Apr 21 17:16 stderr.txt
[2026-04-21 17:16:10] HITS file was successfully produced:
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc 276189048 Apr 21 17:13 shared/HITS.pool.root.1
[2026-04-21 17:16:10]  *** Contents of shared directory: ***
[2026-04-21 17:16:10] total 2467644
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc 2247923933 Apr 21 12:35 ATLAS.root_0
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:35 start_atlas.sh
[2026-04-21 17:16:10] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:35 input.tar.gz
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc  276189048 Apr 21 17:13 HITS.pool.root.1
[2026-04-21 17:16:10] -rw-------. 1 boinc boinc    2068480 Apr 21 17:15 result.tar.gz
17:16:12 (1107432): run_atlas exited; CPU time 65979.042605
17:16:12 (1107432): called boinc_finish(0)

</stderr_txt>
]]>

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