Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:33:00 (363009): wrapper (7.7.26015): starting
05:33:00 (363009): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 05:33:00] Arguments: --nthreads 8
[2026-04-21 05:33:00] Threads: 8
[2026-04-21 05:33:00] Checking for CVMFS
[2026-04-21 05:33:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:33:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:33:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:33:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:33:00] 2.13.3.0 1513861 108783 336660 158685 3 341 26305639 32935937 16305 16776704 0 427662503 99.603 516721770 31031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 05:33:00] CVMFS is ok
[2026-04-21 05:33:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:33:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:33:00] Further information can be found at the LHC@home message board.
[2026-04-21 05:33:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:33:00] Checking for apptainer binary...
[2026-04-21 05:33:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:33:00] Running /usr/bin/apptainer --version
[2026-04-21 05:33:00] apptainer version 1.4.5-2.el9
[2026-04-21 05:33:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:33:01] c6-12-29-4.aglt2.org
[2026-04-21 05:33:01] apptainer works
[2026-04-21 05:33:01] Set ATHENA_PROC_NUMBER=8
[2026-04-21 05:33:01] Set ATHENA_CORE_NUMBER=8
[2026-04-21 05:33:01] Starting ATLAS job with PandaID=7105149875
[2026-04-21 05:33:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 09:47:56]  *** The last 200 lines of the pilot log: ***
[2026-04-21 09:47:56] 2026-04-21 13:47:10,991 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105149875/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,038 | INFO     | extracted standard info from prmon json
[2026-04-21 09:47:56] 2026-04-21 13:47:11,038 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 09:47:56] 2026-04-21 13:47:11,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 09:47:56] 2026-04-21 13:47:11,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 09:47:56] 2026-04-21 13:47:11,063 | INFO     | fitting pss+swap vs Time
[2026-04-21 09:47:56] 2026-04-21 13:47:11,063 | INFO     | sum of square deviations: 4787325704.505995
[2026-04-21 09:47:56] 2026-04-21 13:47:11,065 | INFO     | sum of deviations: 32419298637.108414
[2026-04-21 09:47:56] 2026-04-21 13:47:11,065 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,065 | INFO     | mean y: 2554729.437751004
[2026-04-21 09:47:56] 2026-04-21 13:47:11,065 | INFO     | intersect: 2554729.437751004
[2026-04-21 09:47:56] 2026-04-21 13:47:11,066 | INFO     | chi2: 2.2150419762019125
[2026-04-21 09:47:56] 2026-04-21 13:47:11,066 | INFO     | sum of square deviations: 4504641569.75
[2026-04-21 09:47:56] 2026-04-21 13:47:11,086 | INFO     | sum of deviations: 48403171212.749535
[2026-04-21 09:47:56] 2026-04-21 13:47:11,086 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,086 | INFO     | mean y: 2563207.225409836
[2026-04-21 09:47:56] 2026-04-21 13:47:11,087 | INFO     | intersect: 2563207.225409836
[2026-04-21 09:47:56] 2026-04-21 13:47:11,087 | INFO     | chi2: 1.4647757371458252
[2026-04-21 09:47:56] 2026-04-21 13:47:11,087 | INFO     | current chi2=1.4647757371458252 (change=33.871423075356496 %)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,087 | INFO     | sum of square deviations: 4233351386.4351315
[2026-04-21 09:47:56] 2026-04-21 13:47:11,107 | INFO     | sum of deviations: 47362156972.98743
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | mean y: 2562621.9832635983
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | intersect: 2562621.9832635983
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | chi2: 1.4649345522027668
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | current chi2=1.4649345522027668 (change=-0.010842277962021304 %)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,108 | INFO     | right removable region: 238
[2026-04-21 09:47:56] 2026-04-21 13:47:11,109 | INFO     | sum of square deviations: 4504677019.147516
[2026-04-21 09:47:56] 2026-04-21 13:47:11,137 | INFO     | sum of deviations: -7270468731.950823
[2026-04-21 09:47:56] 2026-04-21 13:47:11,137 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,137 | INFO     | mean y: 2575971.8401639345
[2026-04-21 09:47:56] 2026-04-21 13:47:11,137 | INFO     | intersect: 2575971.8401639345
[2026-04-21 09:47:56] 2026-04-21 13:47:11,138 | INFO     | chi2: 0.8540282112435795
[2026-04-21 09:47:56] 2026-04-21 13:47:11,138 | INFO     | current chi2=0.8540282112435795 (change=61.44415228157597 %)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,138 | INFO     | sum of square deviations: 4233377383.774043
[2026-04-21 09:47:56] 2026-04-21 13:47:11,140 | INFO     | sum of deviations: -18688564704.615063
[2026-04-21 09:47:56] 2026-04-21 13:47:11,140 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,140 | INFO     | mean y: 2582390.418410042
[2026-04-21 09:47:56] 2026-04-21 13:47:11,167 | INFO     | intersect: 2582390.418410042
[2026-04-21 09:47:56] 2026-04-21 13:47:11,168 | INFO     | chi2: 0.7793820003040153
[2026-04-21 09:47:56] 2026-04-21 13:47:11,168 | INFO     | current chi2=0.7793820003040153 (change=8.740485379384525 %)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,168 | INFO     | left removable region: 10
[2026-04-21 09:47:56] 2026-04-21 13:47:11,168 | INFO     | sum of square deviations: 3675306671.732456
[2026-04-21 09:47:56] 2026-04-21 13:47:11,258 | INFO     | sum of deviations: -2300222466.7675443
[2026-04-21 09:47:56] 2026-04-21 13:47:11,259 | INFO     | mean x (centered): 0.0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,259 | INFO     | mean y: 2591838.25877193
[2026-04-21 09:47:56] 2026-04-21 13:47:11,259 | INFO     | intersect: 2591838.25877193
[2026-04-21 09:47:56] 2026-04-21 13:47:11,259 | INFO     | chi2: 0.015364781977677957
[2026-04-21 09:47:56] 2026-04-21 13:47:11,259 | INFO     | current memory leak: -0.63 B/s (using 228 data points, chi2=0.02)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | could have reported an average CPU frequency of 2609 MHz (12 samples)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | ..............................
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | . Timing measurements:
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | . get job = 0 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | . initial setup = 7 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,260 | INFO     | . payload setup = 14 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,261 | INFO     | . stage-in = 0 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,261 | INFO     | . payload execution = 15194 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,261 | INFO     | . stage-out = 4 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,261 | INFO     | . log creation = 0 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,261 | INFO     | ..............................
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | 
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | job summary report
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | --------------------------------------------------
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | PanDA job id: 7105149875
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | task id: 49820375
[2026-04-21 09:47:56] 2026-04-21 13:47:11,981 | INFO     | errors: (none)
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | pilot state: finished 
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | transexitcode: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | exeerrorcode: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | exeerrordiag: 
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | exitcode: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | exitmsg: OK
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | cpuconsumptiontime: 78678 s
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | nevents: 400
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | neventsw: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | pid: 373358
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | pgrp: 373358
[2026-04-21 09:47:56] 2026-04-21 13:47:11,982 | INFO     | corecount: 8
[2026-04-21 09:47:56] 2026-04-21 13:47:11,983 | INFO     | event service: False
[2026-04-21 09:47:56] 2026-04-21 13:47:11,983 | INFO     | sizes: {0: 2281818, 1: 2283392, 11: 2283420, 15212: 2314615, 15216: 2320370, 15217: 2320426, 15218: 2320748}
[2026-04-21 09:47:56] 2026-04-21 13:47:11,983 | INFO     | --------------------------------------------------
[2026-04-21 09:47:56] 2026-04-21 13:47:11,983 | INFO     | 
[2026-04-21 09:47:56] 2026-04-21 13:47:11,983 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 09:47:56] 2026-04-21 13:47:12,114 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 09:47:56] 2026-04-21 13:47:12,116 | INFO     | job 7105149875 has completed (purged errors)
[2026-04-21 09:47:56] 2026-04-21 13:47:12,117 | INFO     | overall cleanup function is called
[2026-04-21 09:47:56] 2026-04-21 13:47:12,777 | WARNING  | process 373358 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 09:47:56] 2026-04-21 13:47:13,154 | INFO     | --- collectZombieJob: --- 10, [373358]
[2026-04-21 09:47:56] 2026-04-21 13:47:13,154 | INFO     | zombie collector waiting for pid 373358
[2026-04-21 09:47:56] 2026-04-21 13:47:13,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 09:47:56] 2026-04-21 13:47:13,155 | INFO     | collected zombie processes
[2026-04-21 09:47:56] 2026-04-21 13:47:13,155 | INFO     | will attempt to kill all subprocesses of pid=373358
[2026-04-21 09:47:56] 2026-04-21 13:47:13,608 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 09:47:56] 2026-04-21 13:47:17,229 | INFO     | PID=367146 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 09:47:56] 2026-04-21 13:47:17,230 | INFO     | .. there are 23 such processes running
[2026-04-21 09:47:56] 2026-04-21 13:47:17,277 | INFO     | process IDs to be killed: [373358] (in reverse order)
[2026-04-21 09:47:56] 2026-04-21 13:47:17,303 | INFO     | number of running child processes to parent process 373358: 1
[2026-04-21 09:47:56] 2026-04-21 13:47:17,304 | INFO     | maximum number of monitored processes: 6
[2026-04-21 09:47:56] 2026-04-21 13:47:17,304 | INFO     | aborting job monitoring since job object (job id=7105149875) has expired
[2026-04-21 09:47:56] 2026-04-21 13:47:17,482 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 09:47:56] 2026-04-21 13:47:17,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 09:47:56] 2026-04-21 13:47:17,510 | INFO     | did not find any defunct processes belonging to 373358
[2026-04-21 09:47:56] 2026-04-21 13:47:17,529 | INFO     | did not find any defunct processes belonging to 373358
[2026-04-21 09:47:56] 2026-04-21 13:47:17,529 | INFO     | Ready for new job
[2026-04-21 09:47:56] 2026-04-21 13:47:17,531 | INFO     | **************************************
[2026-04-21 09:47:56] 2026-04-21 13:47:17,531 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 09:47:56] 2026-04-21 13:47:17,531 | INFO     | **************************************
[2026-04-21 09:47:56] 2026-04-21 13:47:17,531 | INFO     | 
[2026-04-21 09:47:56] 2026-04-21 13:47:17,537 | INFO     | architecture information:
[2026-04-21 09:47:56] 2026-04-21 13:47:17,537 | INFO     | executing command: cat /etc/os-release
[2026-04-21 09:47:56] 2026-04-21 13:47:17,597 | INFO     | cat /etc/os-release:
[2026-04-21 09:47:56] NAME="CentOS Linux"
[2026-04-21 09:47:56] VERSION="7 (Core)"
[2026-04-21 09:47:56] ID="centos"
[2026-04-21 09:47:56] ID_LIKE="rhel fedora"
[2026-04-21 09:47:56] VERSION_ID="7"
[2026-04-21 09:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 09:47:56] ANSI_COLOR="0;31"
[2026-04-21 09:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 09:47:56] HOME_URL="https://www.centos.org/"
[2026-04-21 09:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 09:47:56] 
[2026-04-21 09:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 09:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 09:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 09:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 09:47:56] 
[2026-04-21 09:47:56] 2026-04-21 13:47:17,597 | INFO     | **************************************
[2026-04-21 09:47:56] 2026-04-21 13:47:18,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 09:47:56] 2026-04-21 13:47:18,161 | INFO     | sufficient remaining disk space (69249007616 B)
[2026-04-21 09:47:56] 2026-04-21 13:47:18,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 09:47:56] 2026-04-21 13:47:18,161 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 09:47:56] 2026-04-21 13:47:18,162 | INFO     | update_server=False
[2026-04-21 09:47:56] 2026-04-21 13:47:18,162 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 09:47:56] 2026-04-21 13:47:18,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-21 09:47:56] 2026-04-21 13:47:18,172 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 09:47:56] 2026-04-21 13:47:18,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 09:47:56] 2026-04-21 13:47:18,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 09:47:56] 2026-04-21 13:47:18,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:47:56] 2026-04-21 13:47:18,178 | INFO     | will abort loop
[2026-04-21 09:47:56] 2026-04-21 13:47:18,451 | INFO     | all job control threads have been joined
[2026-04-21 09:47:56] 2026-04-21 13:47:18,475 | INFO     | all data control threads have been joined
[2026-04-21 09:47:56] 2026-04-21 13:47:18,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 09:47:56] 2026-04-21 13:47:19,167 | INFO     | [job] retrieve thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,183 | INFO     | [job] job monitor thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,218 | INFO     | all payload control threads have been joined
[2026-04-21 09:47:56] 2026-04-21 13:47:19,312 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,317 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,357 | INFO     | [job] validate thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,456 | INFO     | [job] control thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,481 | INFO     | [data] control thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:19,810 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,187 | INFO     | [payload] validate_post thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,234 | INFO     | [payload] control thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,663 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,680 | INFO     | [data] copytool_in thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,703 | INFO     | [payload] failed_post thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:20,761 | INFO     | [data] copytool_out thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:21,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:47:56] 2026-04-21 13:47:21,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 09:47:56] 2026-04-21 13:47:22,090 | INFO     | [job] queue monitor thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:25,450 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 09:47:56] 2026-04-21 13:47:48,712 | INFO     | [monitor] cgroup control has ended
[2026-04-21 09:47:56] 2026-04-21 13:47:49,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815321405248)>', '<ExcThread(monitor, started 139814598862592)>']
[2026-04-21 09:47:56] 2026-04-21 13:47:50,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 09:47:56] 2026-04-21 13:47:50,390 | INFO     | [monitor] control thread has ended
[2026-04-21 09:47:56] 2026-04-21 13:47:54,513 | INFO     | all workflow threads have been joined
[2026-04-21 09:47:56] 2026-04-21 13:47:54,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 09:47:56] 2026-04-21 13:47:54,514 | INFO     | traces error code: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:54,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 09:47:56] 2026-04-21 13:47:55,349 [wrapper] ==== pilot stdout END ====
[2026-04-21 09:47:56] 2026-04-21 13:47:55,357 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 09:47:56] 2026-04-21 13:47:55,369 [wrapper] pilotpid: 367146
[2026-04-21 09:47:56] 2026-04-21 13:47:55,382 [wrapper] Pilot exit status: 0
[2026-04-21 09:47:56] 2026-04-21 13:47:55,440 [wrapper] pandaids: 7105149875
[2026-04-21 09:47:56] 2026-04-21 13:47:55,568 [wrapper] cleanup supervisor_pilot 1486166 367147
[2026-04-21 09:47:56] 2026-04-21 13:47:55,575 [wrapper] Test setup, not cleaning
[2026-04-21 09:47:56] 2026-04-21 13:47:55,589 [wrapper] apfmon messages muted
[2026-04-21 09:47:56] 2026-04-21 13:47:55,593 [wrapper] ==== wrapper stdout END ====
[2026-04-21 09:47:56] 2026-04-21 13:47:55,617 [wrapper] ==== wrapper stderr END ====
[2026-04-21 09:47:56]  *** Error codes and diagnostics ***
[2026-04-21 09:47:56]     "exeErrorCode": 0,
[2026-04-21 09:47:56]     "pilotErrorCode": 0,
[2026-04-21 09:47:56]  *** Listing of results directory ***
[2026-04-21 09:47:56] total 2449708
[2026-04-21 09:47:56] -rwx------. 1 boincer umatlas      36322 Apr 21 03:44 runpilot2-wrapper.sh
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:07 queuedata.json
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 09:47:56] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:32 run_atlas
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:32 job.xml
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas 2221852924 Apr 21 05:33 EVNT.49820373._000036.pool.root.1
[2026-04-21 09:47:56] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:33 shared
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 05:33 input.tar.gz
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:33 start_atlas.sh
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:33 boinc_lockfile
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 05:33 pandaJob.out
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas         57 Apr 21 05:33 setup.sh.local
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas     995850 Apr 21 05:33 agis_schedconf.cvmfs.json
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas        444 Apr 21 05:33 workernode_map.json
[2026-04-21 09:47:56] drwx------. 5 boincer umatlas       4096 Apr 21 05:33 pilot3
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas       6794 Apr 21 09:39 init_data.xml
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas  279120969 Apr 21 09:45 HITS.49820375._010147.pool.root.1
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas        489 Apr 21 09:45 boinc_task_state.xml
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas         95 Apr 21 09:46 pilot_heartbeat.json
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas       1044 Apr 21 09:47 memory_monitor_summary.json
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas    1510145 Apr 21 09:47 agis_ddmendpoints.agis.ALL.json
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas     434548 Apr 21 09:47 log.49820375._010147.job.log.tgz.1
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas       6416 Apr 21 09:47 heartbeat_new.json
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas       6307 Apr 21 09:47 heartbeat.json
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 09:47 boinc_mmap_file
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas         28 Apr 21 09:47 wrapper_checkpoint.txt
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas       4549 Apr 21 09:47 pilotlog.txt
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas    1294736 Apr 21 09:47 log.49820375._010147.job.log.1
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas        357 Apr 21 09:47 output.list
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas        410 Apr 21 09:47 runtime_log
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas    1751040 Apr 21 09:47 result.tar.gz
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 09:47 runtime_log.err
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas        659 Apr 21 09:47 2ad589f34f1d.diag
[2026-04-21 09:47:56] -rw-r--r--. 1 boincer umatlas      21121 Apr 21 09:47 stderr.txt
[2026-04-21 09:47:56] HITS file was successfully produced:
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas 279120969 Apr 21 09:45 shared/HITS.pool.root.1
[2026-04-21 09:47:56]  *** Contents of shared directory: ***
[2026-04-21 09:47:56] total 2444740
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas 2221852924 Apr 21 05:33 ATLAS.root_0
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 05:33 input.tar.gz
[2026-04-21 09:47:56] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:33 start_atlas.sh
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas  279120969 Apr 21 09:45 HITS.pool.root.1
[2026-04-21 09:47:56] -rw-------. 1 boincer umatlas    1751040 Apr 21 09:47 result.tar.gz
09:47:57 (363009): run_atlas exited; CPU time 79445.737655
09:47:57 (363009): called boinc_finish(0)

</stderr_txt>
]]>

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