Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:27:35 (14178): wrapper (7.7.26015): starting
05:27:35 (14178): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 05:27:35] Arguments: --nthreads 8
[2026-04-21 05:27:35] Threads: 8
[2026-04-21 05:27:35] Checking for CVMFS
[2026-04-21 05:27:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:27:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:27:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:27:36] 2.11.2.0 3004 42796 83612 158685 0 1 14645903 20275200 1 130560 0 8285977 99.915 1734720 11335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 05:27:36] CVMFS is ok
[2026-04-21 05:27:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:27:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:27:36] Further information can be found at the LHC@home message board.
[2026-04-21 05:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:27:36] Checking for apptainer binary...
[2026-04-21 05:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:27:36] Running /usr/bin/apptainer --version
[2026-04-21 05:27:36] apptainer version 1.3.2-1.el7
[2026-04-21 05:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:27:38] c-204-30.aglt2.org
[2026-04-21 05:27:38] apptainer works
[2026-04-21 05:27:38] Set ATHENA_PROC_NUMBER=8
[2026-04-21 05:27:38] Set ATHENA_CORE_NUMBER=8
[2026-04-21 05:27:38] Starting ATLAS job with PandaID=7105217701
[2026-04-21 05:27:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 09:15:42]  *** The last 200 lines of the pilot log: ***
[2026-04-21 09:15:42] 2026-04-21 13:14:59,482 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-21 09:15:42] 2026-04-21 13:14:59,482 | INFO     | this job has now completed (state=finished)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,482 | INFO     | log transfer has been attempted: DONE
[2026-04-21 09:15:42] 2026-04-21 13:14:59,483 | INFO     | job 7105217701 has finished - writing final server update
[2026-04-21 09:15:42] 2026-04-21 13:14:59,483 | INFO     | total number of processed events: 400 (read)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105217701/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,485 | INFO     | extracted standard info from prmon json
[2026-04-21 09:15:42] 2026-04-21 13:14:59,485 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 09:15:42] 2026-04-21 13:14:59,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 09:15:42] 2026-04-21 13:14:59,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 09:15:42] 2026-04-21 13:14:59,490 | INFO     | fitting pss+swap vs Time
[2026-04-21 09:15:42] 2026-04-21 13:14:59,490 | INFO     | sum of square deviations: 3438620752.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,492 | INFO     | sum of deviations: -18358190339.999977
[2026-04-21 09:15:42] 2026-04-21 13:14:59,492 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,492 | INFO     | mean y: 2570544.3497757846
[2026-04-21 09:15:42] 2026-04-21 13:14:59,492 | INFO     | intersect: 2570544.3497757846
[2026-04-21 09:15:42] 2026-04-21 13:14:59,492 | INFO     | chi2: 2.5788532061385947
[2026-04-21 09:15:42] 2026-04-21 13:14:59,493 | INFO     | sum of square deviations: 3212467674.5
[2026-04-21 09:15:42] 2026-04-21 13:14:59,494 | INFO     | sum of deviations: -2627669183.9999948
[2026-04-21 09:15:42] 2026-04-21 13:14:59,494 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,494 | INFO     | mean y: 2580966.256880734
[2026-04-21 09:15:42] 2026-04-21 13:14:59,494 | INFO     | intersect: 2580966.256880734
[2026-04-21 09:15:42] 2026-04-21 13:14:59,495 | INFO     | chi2: 1.813675873688787
[2026-04-21 09:15:42] 2026-04-21 13:14:59,495 | INFO     | current chi2=1.813675873688787 (change=29.671224815294313 %)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,495 | INFO     | sum of square deviations: 2996454322.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,496 | INFO     | sum of deviations: -2387897581.9999986
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | mean y: 2581135.58685446
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | intersect: 2581135.58685446
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | chi2: 1.813792178530441
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | current chi2=1.813792178530441 (change=-0.006412658586970968 %)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,497 | INFO     | right removable region: 212
[2026-04-21 09:15:42] 2026-04-21 13:14:59,498 | INFO     | sum of square deviations: 3212467674.5
[2026-04-21 09:15:42] 2026-04-21 13:14:59,499 | INFO     | sum of deviations: -55464449256.50001
[2026-04-21 09:15:42] 2026-04-21 13:14:59,499 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,499 | INFO     | mean y: 2595323.8211009176
[2026-04-21 09:15:42] 2026-04-21 13:14:59,500 | INFO     | intersect: 2595323.8211009176
[2026-04-21 09:15:42] 2026-04-21 13:14:59,500 | INFO     | chi2: 1.0043571896086672
[2026-04-21 09:15:42] 2026-04-21 13:14:59,500 | INFO     | current chi2=1.0043571896086672 (change=61.05411555733622 %)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,500 | INFO     | sum of square deviations: 2996454322.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,502 | INFO     | sum of deviations: -59234448574.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,502 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,502 | INFO     | mean y: 2597959.9342723005
[2026-04-21 09:15:42] 2026-04-21 13:14:59,502 | INFO     | intersect: 2597959.9342723005
[2026-04-21 09:15:42] 2026-04-21 13:14:59,502 | INFO     | chi2: 0.9627655185761846
[2026-04-21 09:15:42] 2026-04-21 13:14:59,503 | INFO     | current chi2=0.9627655185761846 (change=4.141123443213274 %)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,503 | INFO     | left removable region: 10
[2026-04-21 09:15:42] 2026-04-21 13:14:59,503 | INFO     | sum of square deviations: 2555770710.5
[2026-04-21 09:15:42] 2026-04-21 13:14:59,504 | INFO     | sum of deviations: -41943145061.999985
[2026-04-21 09:15:42] 2026-04-21 13:14:59,504 | INFO     | mean x (centered): 0.0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,504 | INFO     | mean y: 2610605.7425742573
[2026-04-21 09:15:42] 2026-04-21 13:14:59,505 | INFO     | intersect: 2610605.7425742573
[2026-04-21 09:15:42] 2026-04-21 13:14:59,505 | INFO     | chi2: 0.16858813990052834
[2026-04-21 09:15:42] 2026-04-21 13:14:59,505 | INFO     | current memory leak: -16.41 B/s (using 202 data points, chi2=0.17)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,505 | INFO     | could have reported an average CPU frequency of 1679 MHz (11 samples)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | ..............................
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . Timing measurements:
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . get job = 0 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . initial setup = 11 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . payload setup = 19 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . stage-in = 1 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . payload execution = 13567 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,506 | INFO     | . stage-out = 2 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,507 | INFO     | . log creation = 0 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,507 | INFO     | ..............................
[2026-04-21 09:15:42] 2026-04-21 13:14:59,591 | INFO     | 
[2026-04-21 09:15:42] 2026-04-21 13:14:59,591 | INFO     | job summary report
[2026-04-21 09:15:42] 2026-04-21 13:14:59,591 | INFO     | --------------------------------------------------
[2026-04-21 09:15:42] 2026-04-21 13:14:59,592 | INFO     | PanDA job id: 7105217701
[2026-04-21 09:15:42] 2026-04-21 13:14:59,592 | INFO     | task id: 49820244
[2026-04-21 09:15:42] 2026-04-21 13:14:59,592 | INFO     | errors: (none)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 09:15:42] 2026-04-21 13:14:59,592 | INFO     | pilot state: finished 
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | transexitcode: 0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | exeerrorcode: 0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | exeerrordiag: 
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | exitcode: 0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | exitmsg: OK
[2026-04-21 09:15:42] 2026-04-21 13:14:59,593 | INFO     | cpuconsumptiontime: 102215 s
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | nevents: 400
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | neventsw: 0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | pid: 23404
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | pgrp: 23404
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | corecount: 8
[2026-04-21 09:15:42] 2026-04-21 13:14:59,594 | INFO     | event service: False
[2026-04-21 09:15:42] 2026-04-21 13:14:59,595 | INFO     | sizes: {0: 2281783, 2: 2283357, 11: 2283385, 13590: 2313626, 13591: 2313625, 13593: 2322707, 13595: 2323085}
[2026-04-21 09:15:42] 2026-04-21 13:14:59,595 | INFO     | --------------------------------------------------
[2026-04-21 09:15:42] 2026-04-21 13:14:59,595 | INFO     | 
[2026-04-21 09:15:42] 2026-04-21 13:14:59,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 09:15:42] 2026-04-21 13:14:59,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,627 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 09:15:42] 2026-04-21 13:14:59,628 | INFO     | job 7105217701 has completed (purged errors)
[2026-04-21 09:15:42] 2026-04-21 13:14:59,628 | INFO     | overall cleanup function is called
[2026-04-21 09:15:42] 2026-04-21 13:15:00,637 | INFO     | --- collectZombieJob: --- 10, [23404]
[2026-04-21 09:15:42] 2026-04-21 13:15:00,659 | INFO     | zombie collector waiting for pid 23404
[2026-04-21 09:15:42] 2026-04-21 13:15:00,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 09:15:42] 2026-04-21 13:15:00,659 | INFO     | collected zombie processes
[2026-04-21 09:15:42] 2026-04-21 13:15:00,659 | INFO     | will attempt to kill all subprocesses of pid=23404
[2026-04-21 09:15:42] 2026-04-21 13:15:00,745 | INFO     | process IDs to be killed: [23404] (in reverse order)
[2026-04-21 09:15:42] 2026-04-21 13:15:00,803 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 09:15:42] 2026-04-21 13:15:00,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 09:15:42] 2026-04-21 13:15:00,808 | INFO     | did not find any defunct processes belonging to 23404
[2026-04-21 09:15:42] 2026-04-21 13:15:00,812 | INFO     | did not find any defunct processes belonging to 23404
[2026-04-21 09:15:42] 2026-04-21 13:15:00,812 | INFO     | Ready for new job
[2026-04-21 09:15:42] 2026-04-21 13:15:00,814 | INFO     | **************************************
[2026-04-21 09:15:42] 2026-04-21 13:15:00,814 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 09:15:42] 2026-04-21 13:15:00,814 | INFO     | **************************************
[2026-04-21 09:15:42] 2026-04-21 13:15:00,815 | INFO     | 
[2026-04-21 09:15:42] 2026-04-21 13:15:00,815 | INFO     | architecture information:
[2026-04-21 09:15:42] 2026-04-21 13:15:00,816 | INFO     | executing command: cat /etc/os-release
[2026-04-21 09:15:42] 2026-04-21 13:15:00,833 | INFO     | cat /etc/os-release:
[2026-04-21 09:15:42] NAME="CentOS Linux"
[2026-04-21 09:15:42] VERSION="7 (Core)"
[2026-04-21 09:15:42] ID="centos"
[2026-04-21 09:15:42] ID_LIKE="rhel fedora"
[2026-04-21 09:15:42] VERSION_ID="7"
[2026-04-21 09:15:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 09:15:42] ANSI_COLOR="0;31"
[2026-04-21 09:15:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 09:15:42] HOME_URL="https://www.centos.org/"
[2026-04-21 09:15:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 09:15:42] 
[2026-04-21 09:15:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 09:15:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 09:15:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 09:15:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 09:15:42] 
[2026-04-21 09:15:42] 2026-04-21 13:15:00,833 | INFO     | **************************************
[2026-04-21 09:15:42] 2026-04-21 13:15:01,337 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 09:15:42] 2026-04-21 13:15:01,356 | INFO     | sufficient remaining disk space (14400094208 B)
[2026-04-21 09:15:42] 2026-04-21 13:15:01,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 09:15:42] 2026-04-21 13:15:01,357 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 09:15:42] 2026-04-21 13:15:01,357 | INFO     | update_server=False
[2026-04-21 09:15:42] 2026-04-21 13:15:01,357 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 09:15:42] 2026-04-21 13:15:01,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:15:42] 2026-04-21 13:15:01,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 09:15:42] 2026-04-21 13:15:01,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 09:15:42] 2026-04-21 13:15:01,730 | INFO     | job.realtimelogging is not enabled
[2026-04-21 09:15:42] 2026-04-21 13:15:01,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:15:42] 2026-04-21 13:15:01,863 | INFO     | aborting loop
[2026-04-21 09:15:42] 2026-04-21 13:15:01,883 | INFO     | all job control threads have been joined
[2026-04-21 09:15:42] 2026-04-21 13:15:01,971 | INFO     | all data control threads have been joined
[2026-04-21 09:15:42] 2026-04-21 13:15:02,362 | INFO     | [job] retrieve thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,363 | INFO     | [job] queue monitor thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,736 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,790 | INFO     | all payload control threads have been joined
[2026-04-21 09:15:42] 2026-04-21 13:15:02,844 | INFO     | [payload] validate_post thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,868 | INFO     | [job] job monitor thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,889 | INFO     | [job] control thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:02,977 | INFO     | [data] control thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,058 | INFO     | [job] validate thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,108 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,146 | INFO     | [data] copytool_in thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,147 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,178 | INFO     | [payload] failed_post thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,364 | INFO     | [data] copytool_out thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,796 | INFO     | [payload] control thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:03,855 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:05,364 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 09:15:42] 2026-04-21 13:15:31,008 | INFO     | PID=18253 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-21 09:15:42] 2026-04-21 13:15:31,008 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 09:15:42] 2026-04-21 13:15:31,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 09:15:42] 2026-04-21 13:15:31,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 09:15:42] 2026-04-21 13:15:35,269 | INFO     | [monitor] cgroup control has ended
[2026-04-21 09:15:42] 2026-04-21 13:15:37,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513798870848)>', '<ExcThread(monitor, started 140513051133696)>']
[2026-04-21 09:15:42] 2026-04-21 13:15:38,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 09:15:42] 2026-04-21 13:15:38,045 | INFO     | [monitor] control thread has ended
[2026-04-21 09:15:42] 2026-04-21 13:15:42,262 | INFO     | all workflow threads have been joined
[2026-04-21 09:15:42] 2026-04-21 13:15:42,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 09:15:42] 2026-04-21 13:15:42,262 | INFO     | traces error code: 0
[2026-04-21 09:15:42] 2026-04-21 13:15:42,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 09:15:42] 2026-04-21 13:15:42,388 [wrapper] ==== pilot stdout END ====
[2026-04-21 09:15:42] 2026-04-21 13:15:42,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 09:15:42] 2026-04-21 13:15:42,397 [wrapper] pilotpid: 18253
[2026-04-21 09:15:42] 2026-04-21 13:15:42,401 [wrapper] Pilot exit status: 0
[2026-04-21 09:15:42] 2026-04-21 13:15:42,422 [wrapper] pandaids: 7105217701
[2026-04-21 09:15:42] 2026-04-21 13:15:42,462 [wrapper] cleanup supervisor_pilot 10286 18254
[2026-04-21 09:15:42] 2026-04-21 13:15:42,467 [wrapper] Test setup, not cleaning
[2026-04-21 09:15:42] 2026-04-21 13:15:42,473 [wrapper] apfmon messages muted
[2026-04-21 09:15:42] 2026-04-21 13:15:42,478 [wrapper] ==== wrapper stdout END ====
[2026-04-21 09:15:42] 2026-04-21 13:15:42,483 [wrapper] ==== wrapper stderr END ====
[2026-04-21 09:15:42]  *** Error codes and diagnostics ***
[2026-04-21 09:15:42]     "exeErrorCode": 0,
[2026-04-21 09:15:42]     "pilotErrorCode": 0,
[2026-04-21 09:15:42]  *** Listing of results directory ***
[2026-04-21 09:15:42] total 2456992
[2026-04-21 09:15:42] -rwx------ 1 boincer umatlas      36322 Apr 21 03:44 runpilot2-wrapper.sh
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas       5094 Apr 21 05:06 queuedata.json
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas        100 Apr 21 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 09:15:42] -rwxr-xr-x 1 boincer umatlas       7986 Apr 21 05:27 run_atlas
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas        105 Apr 21 05:27 job.xml
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas 2230728725 Apr 21 05:27 EVNT.49820242._000038.pool.root.1
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 05:27 start_atlas.sh
[2026-04-21 09:15:42] drwxrwx--x 2 boincer umatlas       4096 Apr 21 05:27 shared
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas     656926 Apr 21 05:27 input.tar.gz
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas          0 Apr 21 05:27 boinc_lockfile
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas       2551 Apr 21 05:27 pandaJob.out
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas         57 Apr 21 05:27 setup.sh.local
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas     995850 Apr 21 05:28 agis_schedconf.cvmfs.json
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas        432 Apr 21 05:28 workernode_map.json
[2026-04-21 09:15:42] drwx------ 5 boincer umatlas       4096 Apr 21 05:28 pilot3
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas       5827 Apr 21 09:13 init_data.xml
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas  277856643 Apr 21 09:14 HITS.49820244._013679.pool.root.1
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas        490 Apr 21 09:14 boinc_task_state.xml
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas         95 Apr 21 09:14 pilot_heartbeat.json
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas       1051 Apr 21 09:14 memory_monitor_summary.json
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas    1512404 Apr 21 09:14 agis_ddmendpoints.agis.ALL.json
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas     432208 Apr 21 09:14 log.49820244._013679.job.log.tgz.1
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas       6427 Apr 21 09:14 heartbeat_new.json
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas       6318 Apr 21 09:14 heartbeat.json
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas         29 Apr 21 09:15 wrapper_checkpoint.txt
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas       8192 Apr 21 09:15 boinc_mmap_file
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas       4813 Apr 21 09:15 pilotlog.txt
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas    1220760 Apr 21 09:15 log.49820244._013679.job.log.1
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas        357 Apr 21 09:15 output.list
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas        410 Apr 21 09:15 runtime_log
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas    1669120 Apr 21 09:15 result.tar.gz
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas       8964 Apr 21 09:15 runtime_log.err
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas        664 Apr 21 09:15 2abe15594935.diag
[2026-04-21 09:15:42] -rw-r--r-- 1 boincer umatlas      20978 Apr 21 09:15 stderr.txt
[2026-04-21 09:15:42] HITS file was successfully produced:
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas 277856643 Apr 21 09:14 shared/HITS.pool.root.1
[2026-04-21 09:15:42]  *** Contents of shared directory: ***
[2026-04-21 09:15:42] total 2452096
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas 2230728725 Apr 21 05:27 ATLAS.root_0
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 05:27 start_atlas.sh
[2026-04-21 09:15:42] -rw-r--r-- 2 boincer umatlas     656926 Apr 21 05:27 input.tar.gz
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas  277856643 Apr 21 09:14 HITS.pool.root.1
[2026-04-21 09:15:42] -rw------- 1 boincer umatlas    1669120 Apr 21 09:15 result.tar.gz
09:15:44 (14178): run_atlas exited; CPU time 102141.876193
09:15:44 (14178): called boinc_finish(0)

</stderr_txt>
]]>

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