Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:33 (4035843): wrapper (7.7.26015): starting
05:18:33 (4035843): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 05:18:33] Arguments: --nthreads 9
[2026-04-21 05:18:33] Threads: 9
[2026-04-21 05:18:33] Checking for CVMFS
[2026-04-21 05:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:18:33] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:18:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:18:33] 2.13.3.0 6592 160679 370540 158684 0 62 37643192 40960000 22473 16776704 0 376640247 99.668 336818411 36044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 05:18:33] CVMFS is ok
[2026-04-21 05:18:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:18:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:18:33] Further information can be found at the LHC@home message board.
[2026-04-21 05:18:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:18:33] Checking for apptainer binary...
[2026-04-21 05:18:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:18:33] Running /usr/bin/apptainer --version
[2026-04-21 05:18:34] apptainer version 1.4.5-2.el9
[2026-04-21 05:18:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:18:34] c-211-35-2.aglt2.org
[2026-04-21 05:18:34] apptainer works
[2026-04-21 05:18:34] Set ATHENA_PROC_NUMBER=9
[2026-04-21 05:18:34] Set ATHENA_CORE_NUMBER=9
[2026-04-21 05:18:34] Starting ATLAS job with PandaID=7104906067
[2026-04-21 05:18:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 12:46:05]  *** The last 200 lines of the pilot log: ***
[2026-04-21 12:46:05] 2026-04-21 16:45:29,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,822 | INFO     | log transfer has been attempted: DONE
[2026-04-21 12:46:05] 2026-04-21 16:45:29,822 | INFO     | job 7104906067 has finished - writing final server update
[2026-04-21 12:46:05] 2026-04-21 16:45:29,823 | INFO     | total number of processed events: 400 (read)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,853 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7104906067/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,854 | INFO     | extracted standard info from prmon json
[2026-04-21 12:46:05] 2026-04-21 16:45:29,854 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 12:46:05] 2026-04-21 16:45:29,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 12:46:05] 2026-04-21 16:45:29,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 12:46:05] 2026-04-21 16:45:29,863 | INFO     | fitting pss+swap vs Time
[2026-04-21 12:46:05] 2026-04-21 16:45:29,864 | INFO     | sum of square deviations: 26234433451.193623
[2026-04-21 12:46:05] 2026-04-21 16:45:29,869 | INFO     | sum of deviations: 65403188420.32344
[2026-04-21 12:46:05] 2026-04-21 16:45:29,869 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,869 | INFO     | mean y: 2606957.91571754
[2026-04-21 12:46:05] 2026-04-21 16:45:29,870 | INFO     | intersect: 2606957.91571754
[2026-04-21 12:46:05] 2026-04-21 16:45:29,871 | INFO     | chi2: 2.1608442750173156
[2026-04-21 12:46:05] 2026-04-21 16:45:29,871 | INFO     | sum of square deviations: 25348289347.013813
[2026-04-21 12:46:05] 2026-04-21 16:45:29,876 | INFO     | sum of deviations: 92452344988.23041
[2026-04-21 12:46:05] 2026-04-21 16:45:29,876 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,877 | INFO     | mean y: 2611566.3824884794
[2026-04-21 12:46:05] 2026-04-21 16:45:29,877 | INFO     | intersect: 2611566.3824884794
[2026-04-21 12:46:05] 2026-04-21 16:45:29,877 | INFO     | chi2: 1.4673876823961651
[2026-04-21 12:46:05] 2026-04-21 16:45:29,878 | INFO     | current chi2=1.4673876823961651 (change=32.09192817078841 %)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,878 | INFO     | sum of square deviations: 24482331667.79487
[2026-04-21 12:46:05] 2026-04-21 16:45:29,883 | INFO     | sum of deviations: 90151400376.71786
[2026-04-21 12:46:05] 2026-04-21 16:45:29,883 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,883 | INFO     | mean y: 2611161.435897436
[2026-04-21 12:46:05] 2026-04-21 16:45:29,883 | INFO     | intersect: 2611161.435897436
[2026-04-21 12:46:05] 2026-04-21 16:45:29,884 | INFO     | chi2: 1.4675856007668553
[2026-04-21 12:46:05] 2026-04-21 16:45:29,884 | INFO     | current chi2=1.4675856007668553 (change=-0.013487803738884759 %)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,884 | INFO     | right removable region: 428
[2026-04-21 12:46:05] 2026-04-21 16:45:29,885 | INFO     | sum of square deviations: 25348135017.013798
[2026-04-21 12:46:05] 2026-04-21 16:45:29,890 | INFO     | sum of deviations: -7220294976.059906
[2026-04-21 12:46:05] 2026-04-21 16:45:29,890 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,890 | INFO     | mean y: 2619400.1405529953
[2026-04-21 12:46:05] 2026-04-21 16:45:29,890 | INFO     | intersect: 2619400.1405529953
[2026-04-21 12:46:05] 2026-04-21 16:45:29,891 | INFO     | chi2: 0.8041854404176042
[2026-04-21 12:46:05] 2026-04-21 16:45:29,891 | INFO     | current chi2=0.8041854404176042 (change=62.783739221043135 %)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,892 | INFO     | sum of square deviations: 24482049237.971985
[2026-04-21 12:46:05] 2026-04-21 16:45:29,897 | INFO     | sum of deviations: -21332540640.685337
[2026-04-21 12:46:05] 2026-04-21 16:45:29,897 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,897 | INFO     | mean y: 2621874.3916083914
[2026-04-21 12:46:05] 2026-04-21 16:45:29,897 | INFO     | intersect: 2621874.3916083914
[2026-04-21 12:46:05] 2026-04-21 16:45:29,898 | INFO     | chi2: 0.7521372128597106
[2026-04-21 12:46:05] 2026-04-21 16:45:29,898 | INFO     | current chi2=0.7521372128597106 (change=6.472167356184114 %)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,898 | INFO     | left removable region: 10
[2026-04-21 12:46:05] 2026-04-21 16:45:29,899 | INFO     | sum of square deviations: 22646851820.57649
[2026-04-21 12:46:05] 2026-04-21 16:45:29,903 | INFO     | sum of deviations: 4619061203.650723
[2026-04-21 12:46:05] 2026-04-21 16:45:29,904 | INFO     | mean x (centered): 0.0
[2026-04-21 12:46:05] 2026-04-21 16:45:29,904 | INFO     | mean y: 2626497.124401914
[2026-04-21 12:46:05] 2026-04-21 16:45:29,904 | INFO     | intersect: 2626497.124401914
[2026-04-21 12:46:05] 2026-04-21 16:45:29,905 | INFO     | chi2: 0.05036611717468411
[2026-04-21 12:46:05] 2026-04-21 16:45:29,905 | INFO     | current memory leak: 0.20 B/s (using 418 data points, chi2=0.05)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | could have reported an average CPU frequency of 2669 MHz (18 samples)
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | ..............................
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . Timing measurements:
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . get job = 0 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . initial setup = 9 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . payload setup = 10 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . stage-in = 0 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,906 | INFO     | . payload execution = 26758 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,907 | INFO     | . stage-out = 3 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,907 | INFO     | . log creation = 0 s
[2026-04-21 12:46:05] 2026-04-21 16:45:29,907 | INFO     | ..............................
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | 
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | job summary report
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | --------------------------------------------------
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | PanDA job id: 7104906067
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | task id: 49820244
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | errors: (none)
[2026-04-21 12:46:05] 2026-04-21 16:45:30,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | pilot state: finished 
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | transexitcode: 0
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | exeerrorcode: 0
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | exeerrordiag: 
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | exitcode: 0
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | exitmsg: OK
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | cpuconsumptiontime: 82768 s
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | nevents: 400
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | neventsw: 0
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | pid: 4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | pgrp: 4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | corecount: 9
[2026-04-21 12:46:05] 2026-04-21 16:45:30,608 | INFO     | event service: False
[2026-04-21 12:46:05] 2026-04-21 16:45:30,609 | INFO     | sizes: {0: 2281613, 1: 2283385, 11: 2283385, 26773: 2319937, 26777: 2321957, 26779: 2322013, 26782: 2322335}
[2026-04-21 12:46:05] 2026-04-21 16:45:30,609 | INFO     | --------------------------------------------------
[2026-04-21 12:46:05] 2026-04-21 16:45:30,609 | INFO     | 
[2026-04-21 12:46:05] 2026-04-21 16:45:30,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 12:46:05] 2026-04-21 16:45:30,712 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,712 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,714 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 12:46:05] 2026-04-21 16:45:30,715 | INFO     | job 7104906067 has completed (purged errors)
[2026-04-21 12:46:05] 2026-04-21 16:45:30,715 | INFO     | overall cleanup function is called
[2026-04-21 12:46:05] 2026-04-21 16:45:31,731 | INFO     | --- collectZombieJob: --- 10, [4045193]
[2026-04-21 12:46:05] 2026-04-21 16:45:31,731 | INFO     | zombie collector waiting for pid 4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:31,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 12:46:05] 2026-04-21 16:45:31,731 | INFO     | collected zombie processes
[2026-04-21 12:46:05] 2026-04-21 16:45:31,731 | INFO     | will attempt to kill all subprocesses of pid=4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:32,730 | INFO     | process IDs to be killed: [4045193] (in reverse order)
[2026-04-21 12:46:05] 2026-04-21 16:45:32,962 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 12:46:05] 2026-04-21 16:45:32,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 12:46:05] 2026-04-21 16:45:32,987 | INFO     | did not find any defunct processes belonging to 4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:33,012 | INFO     | did not find any defunct processes belonging to 4045193
[2026-04-21 12:46:05] 2026-04-21 16:45:33,012 | INFO     | Ready for new job
[2026-04-21 12:46:05] 2026-04-21 16:45:33,019 | INFO     | **************************************
[2026-04-21 12:46:05] 2026-04-21 16:45:33,019 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 12:46:05] 2026-04-21 16:45:33,019 | INFO     | **************************************
[2026-04-21 12:46:05] 2026-04-21 16:45:33,019 | INFO     | 
[2026-04-21 12:46:05] 2026-04-21 16:45:33,028 | INFO     | architecture information:
[2026-04-21 12:46:05] 2026-04-21 16:45:33,033 | INFO     | executing command: cat /etc/os-release
[2026-04-21 12:46:05] 2026-04-21 16:45:33,057 | INFO     | cat /etc/os-release:
[2026-04-21 12:46:05] NAME="CentOS Linux"
[2026-04-21 12:46:05] VERSION="7 (Core)"
[2026-04-21 12:46:05] ID="centos"
[2026-04-21 12:46:05] ID_LIKE="rhel fedora"
[2026-04-21 12:46:05] VERSION_ID="7"
[2026-04-21 12:46:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 12:46:05] ANSI_COLOR="0;31"
[2026-04-21 12:46:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 12:46:05] HOME_URL="https://www.centos.org/"
[2026-04-21 12:46:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 12:46:05] 
[2026-04-21 12:46:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 12:46:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 12:46:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 12:46:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 12:46:05] 
[2026-04-21 12:46:05] 2026-04-21 16:45:33,058 | INFO     | **************************************
[2026-04-21 12:46:05] 2026-04-21 16:45:33,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 12:46:05] 2026-04-21 16:45:33,697 | INFO     | sufficient remaining disk space (121607553024 B)
[2026-04-21 12:46:05] 2026-04-21 16:45:33,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 12:46:05] 2026-04-21 16:45:33,697 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 12:46:05] 2026-04-21 16:45:33,698 | INFO     | update_server=False
[2026-04-21 12:46:05] 2026-04-21 16:45:33,698 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 12:46:05] 2026-04-21 16:45:33,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 12:46:05] 2026-04-21 16:45:33,773 | INFO     | all job control threads have been joined
[2026-04-21 12:46:05] 2026-04-21 16:45:33,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 12:46:05] 2026-04-21 16:45:33,939 | INFO     | all data control threads have been joined
[2026-04-21 12:46:05] 2026-04-21 16:45:34,118 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 12:46:05] 2026-04-21 16:45:34,118 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 12:46:05] 2026-04-21 16:45:34,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 12:46:05] 2026-04-21 16:45:34,119 | INFO     | will abort loop
[2026-04-21 12:46:05] 2026-04-21 16:45:34,152 | INFO     | all payload control threads have been joined
[2026-04-21 12:46:05] 2026-04-21 16:45:34,708 | INFO     | [job] retrieve thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:34,779 | INFO     | [job] control thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:34,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:34,945 | INFO     | [data] control thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,119 | INFO     | [job] validate thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,125 | INFO     | [job] job monitor thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,158 | INFO     | [payload] control thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 12:46:05] 2026-04-21 16:45:35,437 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,521 | INFO     | [payload] failed_post thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,521 | INFO     | [payload] validate_post thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,705 | INFO     | [data] copytool_out thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,712 | INFO     | [data] copytool_in thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:35,752 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:36,095 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:36,215 | INFO     | [job] queue monitor thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:37,942 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 12:46:05] 2026-04-21 16:45:44,375 | INFO     | [monitor] cgroup control has ended
[2026-04-21 12:46:05] 2026-04-21 16:45:44,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679759972160)>', '<ExcThread(monitor, started 140679388829440)>']
[2026-04-21 12:46:05] 2026-04-21 16:45:49,561 | INFO     | all workflow threads have been joined
[2026-04-21 12:46:05] 2026-04-21 16:45:49,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 12:46:05] 2026-04-21 16:45:49,561 | INFO     | traces error code: 0
[2026-04-21 12:46:05] 2026-04-21 16:45:49,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 12:46:05] 2026-04-21 16:46:04,407 | INFO     | PID=4040144 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 12:46:05] 2026-04-21 16:46:04,407 | INFO     | .. there are 21 such processes running
[2026-04-21 12:46:05] 2026-04-21 16:46:04,408 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 12:46:05] 2026-04-21 16:46:04,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 12:46:05] 2026-04-21 16:46:04,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 12:46:05] 2026-04-21 16:46:04,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 12:46:05] 2026-04-21 16:46:04,409 | INFO     | [monitor] control thread has ended
[2026-04-21 12:46:05] 2026-04-21 16:46:04,695 [wrapper] ==== pilot stdout END ====
[2026-04-21 12:46:05] 2026-04-21 16:46:04,715 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 12:46:05] 2026-04-21 16:46:04,722 [wrapper] pilotpid: 4040144
[2026-04-21 12:46:05] 2026-04-21 16:46:04,746 [wrapper] Pilot exit status: 0
[2026-04-21 12:46:05] 2026-04-21 16:46:04,867 [wrapper] pandaids: 7104906067
[2026-04-21 12:46:05] 2026-04-21 16:46:05,175 [wrapper] cleanup supervisor_pilot 1218181 4040145
[2026-04-21 12:46:05] 2026-04-21 16:46:05,219 [wrapper] Test setup, not cleaning
[2026-04-21 12:46:05] 2026-04-21 16:46:05,235 [wrapper] apfmon messages muted
[2026-04-21 12:46:05] 2026-04-21 16:46:05,298 [wrapper] ==== wrapper stdout END ====
[2026-04-21 12:46:05] 2026-04-21 16:46:05,325 [wrapper] ==== wrapper stderr END ====
[2026-04-21 12:46:05]  *** Error codes and diagnostics ***
[2026-04-21 12:46:05]     "exeErrorCode": 0,
[2026-04-21 12:46:05]     "pilotErrorCode": 0,
[2026-04-21 12:46:05]  *** Listing of results directory ***
[2026-04-21 12:46:05] total 2487544
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 03:41 pilot3.tar.gz
[2026-04-21 12:46:05] -rwx------. 1 boincer umatlas      36322 Apr 21 03:42 runpilot2-wrapper.sh
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 03:52 queuedata.json
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 12:46:05] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:18 run_atlas
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:18 job.xml
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas 2260623088 Apr 21 05:18 EVNT.49820242._000023.pool.root.1
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:18 start_atlas.sh
[2026-04-21 12:46:05] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:18 shared
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas     656920 Apr 21 05:18 input.tar.gz
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:18 boinc_lockfile
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 05:18 pandaJob.out
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas         57 Apr 21 05:18 setup.sh.local
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas     995850 Apr 21 05:18 agis_schedconf.cvmfs.json
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas        444 Apr 21 05:18 workernode_map.json
[2026-04-21 12:46:05] drwx------. 5 boincer umatlas       4096 Apr 21 05:18 pilot3
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas       6776 Apr 21 12:36 init_data.xml
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas        489 Apr 21 12:44 boinc_task_state.xml
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas  276991387 Apr 21 12:44 HITS.49820244._012570.pool.root.1
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas       1061 Apr 21 12:45 memory_monitor_summary.json
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas    1509089 Apr 21 12:45 agis_ddmendpoints.agis.ALL.json
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas     593763 Apr 21 12:45 log.49820244._012570.job.log.tgz.1
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas       6441 Apr 21 12:45 heartbeat_new.json
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas       6332 Apr 21 12:45 heartbeat.json
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 12:46 boinc_mmap_file
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas         28 Apr 21 12:46 wrapper_checkpoint.txt
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas         95 Apr 21 12:46 pilot_heartbeat.json
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas        823 Apr 21 12:46 pilotlog.txt
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas    2198316 Apr 21 12:46 log.49820244._012570.job.log.1
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas        357 Apr 21 12:46 output.list
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas        410 Apr 21 12:46 runtime_log
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas    2805760 Apr 21 12:46 result.tar.gz
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 12:46 runtime_log.err
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas        666 Apr 21 12:46 2a4605f24268.diag
[2026-04-21 12:46:05] -rw-r--r--. 1 boincer umatlas      20891 Apr 21 12:46 stderr.txt
[2026-04-21 12:46:05] HITS file was successfully produced:
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas 276991387 Apr 21 12:44 shared/HITS.pool.root.1
[2026-04-21 12:46:05]  *** Contents of shared directory: ***
[2026-04-21 12:46:05] total 2481548
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas 2260623088 Apr 21 05:18 ATLAS.root_0
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:18 start_atlas.sh
[2026-04-21 12:46:05] -rw-r--r--. 2 boincer umatlas     656920 Apr 21 05:18 input.tar.gz
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas  276991387 Apr 21 12:44 HITS.pool.root.1
[2026-04-21 12:46:05] -rw-------. 1 boincer umatlas    2805760 Apr 21 12:46 result.tar.gz
12:46:07 (4035843): run_atlas exited; CPU time 83902.670683
12:46:07 (4035843): called boinc_finish(0)

</stderr_txt>
]]>

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