Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:38 (11401): wrapper (7.7.26015): starting
11:29:38 (11401): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 11:29:38] Arguments: --nthreads 8
[2026-04-21 11:29:38] Threads: 8
[2026-04-21 11:29:38] Checking for CVMFS
[2026-04-21 11:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 11:29:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 11:29:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 11:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 11:29:44] 2.11.2.0 16919 8200 98192 158685 1 11 18775571 25165824 96 130560 0 1691364 99.762 5144125 17744 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-21 11:29:44] CVMFS is ok
[2026-04-21 11:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 11:29:44] Checking for apptainer binary...
[2026-04-21 11:29:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 11:29:44] Running /usr/bin/apptainer --version
[2026-04-21 11:29:44] apptainer version 1.3.2-1.el7
[2026-04-21 11:29:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 11:30:04] cg-vwn361.simple-grid.lan
[2026-04-21 11:30:04] apptainer works
[2026-04-21 11:30:04] Set ATHENA_PROC_NUMBER=8
[2026-04-21 11:30:04] Set ATHENA_CORE_NUMBER=8
[2026-04-21 11:30:04] Starting ATLAS job with PandaID=7105078523
[2026-04-21 11:30:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 18:54:24]  *** The last 200 lines of the pilot log: ***
[2026-04-21 18:54:24] 2026-04-21 16:53:14,667 | INFO     | this job has now completed (state=finished)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,668 | INFO     | log transfer has been attempted: DONE
[2026-04-21 18:54:24] 2026-04-21 16:53:14,668 | INFO     | job 7105078523 has finished - writing final server update
[2026-04-21 18:54:24] 2026-04-21 16:53:14,668 | INFO     | total number of processed events: 400 (read)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,669 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7105078523/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,670 | INFO     | extracted standard info from prmon json
[2026-04-21 18:54:24] 2026-04-21 16:53:14,670 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 18:54:24] 2026-04-21 16:53:14,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 18:54:24] 2026-04-21 16:53:14,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 18:54:24] 2026-04-21 16:53:14,675 | INFO     | fitting pss+swap vs Time
[2026-04-21 18:54:24] 2026-04-21 16:53:14,676 | INFO     | sum of square deviations: 23803609100.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,687 | INFO     | sum of deviations: 252760925346.99994
[2026-04-21 18:54:24] 2026-04-21 16:53:14,687 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,687 | INFO     | mean y: 2507428.6164705884
[2026-04-21 18:54:24] 2026-04-21 16:53:14,688 | INFO     | intersect: 2507428.6164705884
[2026-04-21 18:54:24] 2026-04-21 16:53:14,688 | INFO     | chi2: 7.79489282197361
[2026-04-21 18:54:24] 2026-04-21 16:53:14,689 | INFO     | sum of square deviations: 22973323765.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | sum of deviations: 277973381602.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | mean y: 2512009.1904761903
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | intersect: 2512009.1904761903
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | chi2: 7.06279477565617
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | current chi2=7.06279477565617 (change=9.392021969226748 %)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,692 | INFO     | right removable region: 419
[2026-04-21 18:54:24] 2026-04-21 16:53:14,693 | INFO     | sum of square deviations: 22973323765.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,696 | INFO     | sum of deviations: 99474905028.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,696 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,696 | INFO     | mean y: 2535572.6428571427
[2026-04-21 18:54:24] 2026-04-21 16:53:14,696 | INFO     | intersect: 2535572.6428571427
[2026-04-21 18:54:24] 2026-04-21 16:53:14,696 | INFO     | chi2: 3.004970268576497
[2026-04-21 18:54:24] 2026-04-21 16:53:14,697 | INFO     | current chi2=3.004970268576497 (change=61.44949857289173 %)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,697 | INFO     | sum of square deviations: 22162573680.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,700 | INFO     | sum of deviations: 263117339.0000038
[2026-04-21 18:54:24] 2026-04-21 16:53:14,700 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,700 | INFO     | mean y: 2554195.7831325303
[2026-04-21 18:54:24] 2026-04-21 16:53:14,700 | INFO     | intersect: 2554195.7831325303
[2026-04-21 18:54:24] 2026-04-21 16:53:14,701 | INFO     | chi2: 0.8995159953540477
[2026-04-21 18:54:24] 2026-04-21 16:53:14,701 | INFO     | current chi2=0.8995159953540477 (change=70.06572727988544 %)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,701 | INFO     | sum of square deviations: 21371126282.5
[2026-04-21 18:54:24] 2026-04-21 16:53:14,711 | INFO     | sum of deviations: -12753138575.499989
[2026-04-21 18:54:24] 2026-04-21 16:53:14,711 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,711 | INFO     | mean y: 2556695.831707317
[2026-04-21 18:54:24] 2026-04-21 16:53:14,712 | INFO     | intersect: 2556695.831707317
[2026-04-21 18:54:24] 2026-04-21 16:53:14,712 | INFO     | chi2: 0.8584783104053332
[2026-04-21 18:54:24] 2026-04-21 16:53:14,712 | INFO     | current chi2=0.8584783104053332 (change=4.562196243387775 %)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,712 | INFO     | left removable region: 15
[2026-04-21 18:54:24] 2026-04-21 16:53:14,713 | INFO     | sum of square deviations: 20446541505.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,715 | INFO     | sum of deviations: 14553006924.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,716 | INFO     | mean x (centered): 0.0
[2026-04-21 18:54:24] 2026-04-21 16:53:14,716 | INFO     | mean y: 2562032.9356435644
[2026-04-21 18:54:24] 2026-04-21 16:53:14,716 | INFO     | intersect: 2562032.9356435644
[2026-04-21 18:54:24] 2026-04-21 16:53:14,716 | INFO     | chi2: 0.07857290296967884
[2026-04-21 18:54:24] 2026-04-21 16:53:14,716 | INFO     | current memory leak: 0.71 B/s (using 404 data points, chi2=0.08)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | ..............................
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . Timing measurements:
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . get job = 0 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . initial setup = 121 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . payload setup = 157 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . stage-in = 0 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . payload execution = 26022 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . stage-out = 3 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | . log creation = 1 s
[2026-04-21 18:54:24] 2026-04-21 16:53:14,717 | INFO     | ..............................
[2026-04-21 18:54:24] 2026-04-21 16:53:15,140 | INFO     | 
[2026-04-21 18:54:24] 2026-04-21 16:53:15,140 | INFO     | job summary report
[2026-04-21 18:54:24] 2026-04-21 16:53:15,140 | INFO     | --------------------------------------------------
[2026-04-21 18:54:24] 2026-04-21 16:53:15,140 | INFO     | PanDA job id: 7105078523
[2026-04-21 18:54:24] 2026-04-21 16:53:15,140 | INFO     | task id: 49820244
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | errors: (none)
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | pilot state: finished 
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | transexitcode: 0
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | exeerrorcode: 0
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | exeerrordiag: 
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | exitcode: 0
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | exitmsg: OK
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | cpuconsumptiontime: 100319 s
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | nevents: 400
[2026-04-21 18:54:24] 2026-04-21 16:53:15,141 | INFO     | neventsw: 0
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | pid: 19925
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | pgrp: 19925
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | corecount: 8
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | event service: False
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | sizes: {0: 2281500, 1: 2265811, 2: 2283385, 12: 2283413, 26184: 2319695, 26188: 2321715, 26191: 2321899, 26192: 2322093}
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | --------------------------------------------------
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | 
[2026-04-21 18:54:24] 2026-04-21 16:53:15,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-21 18:54:24] 2026-04-21 16:53:15,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | job 7105078523 has completed (purged errors)
[2026-04-21 18:54:24] 2026-04-21 16:53:15,641 | INFO     | overall cleanup function is called
[2026-04-21 18:54:24] 2026-04-21 16:53:16,651 | INFO     | --- collectZombieJob: --- 10, [19925]
[2026-04-21 18:54:24] 2026-04-21 16:53:16,651 | INFO     | zombie collector waiting for pid 19925
[2026-04-21 18:54:24] 2026-04-21 16:53:16,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 18:54:24] 2026-04-21 16:53:16,651 | INFO     | collected zombie processes
[2026-04-21 18:54:24] 2026-04-21 16:53:16,651 | INFO     | will attempt to kill all subprocesses of pid=19925
[2026-04-21 18:54:24] 2026-04-21 16:53:16,719 | INFO     | process IDs to be killed: [19925] (in reverse order)
[2026-04-21 18:54:24] 2026-04-21 16:53:17,686 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 18:54:24] 2026-04-21 16:53:17,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 18:54:24] 2026-04-21 16:53:17,688 | INFO     | did not find any defunct processes belonging to 19925
[2026-04-21 18:54:24] 2026-04-21 16:53:17,690 | INFO     | did not find any defunct processes belonging to 19925
[2026-04-21 18:54:24] 2026-04-21 16:53:17,690 | INFO     | Ready for new job
[2026-04-21 18:54:24] 2026-04-21 16:53:17,692 | INFO     | **************************************
[2026-04-21 18:54:24] 2026-04-21 16:53:17,692 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 18:54:24] 2026-04-21 16:53:17,692 | INFO     | **************************************
[2026-04-21 18:54:24] 2026-04-21 16:53:17,692 | INFO     | 
[2026-04-21 18:54:24] 2026-04-21 16:53:17,693 | INFO     | pilot is running in a VM
[2026-04-21 18:54:24] 2026-04-21 16:53:17,693 | INFO     | architecture information:
[2026-04-21 18:54:24] 2026-04-21 16:53:17,693 | INFO     | executing command: cat /etc/os-release
[2026-04-21 18:54:24] 2026-04-21 16:53:18,044 | INFO     | cat /etc/os-release:
[2026-04-21 18:54:24] NAME="CentOS Linux"
[2026-04-21 18:54:24] VERSION="7 (Core)"
[2026-04-21 18:54:24] ID="centos"
[2026-04-21 18:54:24] ID_LIKE="rhel fedora"
[2026-04-21 18:54:24] VERSION_ID="7"
[2026-04-21 18:54:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 18:54:24] ANSI_COLOR="0;31"
[2026-04-21 18:54:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 18:54:24] HOME_URL="https://www.centos.org/"
[2026-04-21 18:54:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 18:54:24] 
[2026-04-21 18:54:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 18:54:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 18:54:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 18:54:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 18:54:24] 
[2026-04-21 18:54:24] 2026-04-21 16:53:18,045 | INFO     | **************************************
[2026-04-21 18:54:24] 2026-04-21 16:53:18,548 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-21 18:54:24] 2026-04-21 16:53:18,740 | INFO     | sufficient remaining disk space (488196014080 B)
[2026-04-21 18:54:24] 2026-04-21 16:53:18,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 18:54:24] 2026-04-21 16:53:18,740 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 18:54:24] 2026-04-21 16:53:18,740 | INFO     | update_server=False
[2026-04-21 18:54:24] 2026-04-21 16:53:18,740 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 18:54:24] 2026-04-21 16:53:18,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 18:54:24] 2026-04-21 16:53:18,976 | INFO     | all job control threads have been joined
[2026-04-21 18:54:24] 2026-04-21 16:53:19,110 | INFO     | all data control threads have been joined
[2026-04-21 18:54:24] 2026-04-21 16:53:19,501 | INFO     | all payload control threads have been joined
[2026-04-21 18:54:24] 2026-04-21 16:53:19,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:54:24] 2026-04-21 16:53:19,506 | INFO     | aborting loop
[2026-04-21 18:54:24] 2026-04-21 16:53:19,746 | INFO     | [job] retrieve thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:19,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:54:24] 2026-04-21 16:53:19,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 18:54:24] 2026-04-21 16:53:19,941 | INFO     | [data] copytool_in thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:19,982 | INFO     | [job] control thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,116 | INFO     | [data] control thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,270 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,422 | INFO     | [payload] validate_post thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,438 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,507 | INFO     | [payload] control thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,512 | INFO     | [job] job monitor thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,759 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,785 | INFO     | [data] copytool_out thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,814 | INFO     | [job] queue monitor thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,826 | INFO     | [job] validate thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:20,939 | INFO     | [payload] failed_post thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:21,069 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:23,820 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 18:54:24] 2026-04-21 16:53:48,817 | INFO     | PID=15437 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-21 18:54:24] 2026-04-21 16:53:48,817 | INFO     | .. there are 2 such processes running
[2026-04-21 18:54:24] 2026-04-21 16:53:48,817 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 18:54:24] 2026-04-21 16:53:48,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 18:54:24] 2026-04-21 16:53:48,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 18:54:24] 2026-04-21 16:54:14,530 | INFO     | [monitor] cgroup control has ended
[2026-04-21 18:54:24] 2026-04-21 16:54:14,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365111957312)>', '<ExcThread(monitor, started 140364681828096)>']
[2026-04-21 18:54:24] 2026-04-21 16:54:14,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 18:54:24] 2026-04-21 16:54:14,973 | INFO     | [monitor] control thread has ended
[2026-04-21 18:54:24] 2026-04-21 16:54:19,880 | INFO     | all workflow threads have been joined
[2026-04-21 18:54:24] 2026-04-21 16:54:19,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 18:54:24] 2026-04-21 16:54:19,880 | INFO     | traces error code: 0
[2026-04-21 18:54:24] 2026-04-21 16:54:19,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 18:54:24] 2026-04-21 16:54:20,297 [wrapper] ==== pilot stdout END ====
[2026-04-21 18:54:24] 2026-04-21 16:54:20,386 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 18:54:24] 2026-04-21 16:54:20,483 [wrapper] pilotpid: 15437
[2026-04-21 18:54:24] 2026-04-21 16:54:20,581 [wrapper] Pilot exit status: 0
[2026-04-21 18:54:24] 2026-04-21 16:54:21,032 [wrapper] pandaids: 7105078523
[2026-04-21 18:54:24] 2026-04-21 16:54:22,132 [wrapper] cleanup supervisor_pilot 27438 15438
[2026-04-21 18:54:24] 2026-04-21 16:54:22,254 [wrapper] Test setup, not cleaning
[2026-04-21 18:54:24] 2026-04-21 16:54:22,340 [wrapper] apfmon messages muted
[2026-04-21 18:54:24] 2026-04-21 16:54:22,472 [wrapper] ==== wrapper stdout END ====
[2026-04-21 18:54:24] 2026-04-21 16:54:22,615 [wrapper] ==== wrapper stderr END ====
[2026-04-21 18:54:24]  *** Error codes and diagnostics ***
[2026-04-21 18:54:24]     "exeErrorCode": 0,
[2026-04-21 18:54:24]     "pilotErrorCode": 0,
[2026-04-21 18:54:24]  *** Listing of results directory ***
[2026-04-21 18:54:24] total 2486532
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc     644190 Apr 21 09:41 pilot3.tar.gz
[2026-04-21 18:54:24] -rwx------. 1 boinc boinc      36322 Apr 21 09:42 runpilot2-wrapper.sh
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc       5094 Apr 21 09:56 queuedata.json
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc        100 Apr 21 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 18:54:24] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 11:29 run_atlas
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc        105 Apr 21 11:29 job.xml
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc       6305 Apr 21 11:29 init_data.xml
[2026-04-21 18:54:24] -rw-r--r--. 2 boinc boinc 2259978159 Apr 21 11:29 EVNT.49820242._000020.pool.root.1
[2026-04-21 18:54:24] -rw-r--r--. 2 boinc boinc      15665 Apr 21 11:29 start_atlas.sh
[2026-04-21 18:54:24] drwxrwx--x. 2 boinc boinc         68 Apr 21 11:29 shared
[2026-04-21 18:54:24] -rw-r--r--. 2 boinc boinc     656911 Apr 21 11:29 input.tar.gz
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc          0 Apr 21 11:29 boinc_lockfile
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc       2551 Apr 21 11:30 pandaJob.out
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc        415 Apr 21 11:36 workernode_map.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc     995850 Apr 21 11:36 agis_schedconf.cvmfs.json
[2026-04-21 18:54:24] drwx------. 5 boinc boinc       4096 Apr 21 11:36 pilot3
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc  276012379 Apr 21 18:51 HITS.49820244._012662.pool.root.1
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc        490 Apr 21 18:51 boinc_task_state.xml
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc       1013 Apr 21 18:53 memory_monitor_summary.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc    1509089 Apr 21 18:53 agis_ddmendpoints.agis.ALL.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc     664716 Apr 21 18:53 log.49820244._012662.job.log.tgz.1
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc       6344 Apr 21 18:53 heartbeat_new.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc       6235 Apr 21 18:53 heartbeat.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc         95 Apr 21 18:53 pilot_heartbeat.json
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc       4879 Apr 21 18:54 pilotlog.txt
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc    2420747 Apr 21 18:54 log.49820244._012662.job.log.1
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc        357 Apr 21 18:54 output.list
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc         29 Apr 21 18:54 wrapper_checkpoint.txt
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc       8192 Apr 21 18:54 boinc_mmap_file
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc        410 Apr 21 18:54 runtime_log
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc    3102720 Apr 21 18:54 result.tar.gz
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc       8438 Apr 21 18:54 runtime_log.err
[2026-04-21 18:54:24] -rw-------. 1 boinc boinc        657 Apr 21 18:54 2a519fa2a7c0.diag
[2026-04-21 18:54:24] -rw-r--r--. 1 boinc boinc      20635 Apr 21 18:54 stderr.txt
[2026-04-21 18:54:25] HITS file was successfully produced:
[2026-04-21 18:54:25] -rw-------. 1 boinc boinc 276012379 Apr 21 18:51 shared/HITS.pool.root.1
[2026-04-21 18:54:25]  *** Contents of shared directory: ***
[2026-04-21 18:54:25] total 2480248
[2026-04-21 18:54:25] -rw-r--r--. 2 boinc boinc 2259978159 Apr 21 11:29 ATLAS.root_0
[2026-04-21 18:54:25] -rw-r--r--. 2 boinc boinc      15665 Apr 21 11:29 start_atlas.sh
[2026-04-21 18:54:25] -rw-r--r--. 2 boinc boinc     656911 Apr 21 11:29 input.tar.gz
[2026-04-21 18:54:25] -rw-------. 1 boinc boinc  276012379 Apr 21 18:51 HITS.pool.root.1
[2026-04-21 18:54:25] -rw-------. 1 boinc boinc    3102720 Apr 21 18:54 result.tar.gz
18:54:26 (11401): run_atlas exited; CPU time 100593.262471
18:54:26 (11401): called boinc_finish(0)

</stderr_txt>
]]>

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