Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:37:10 (786610): wrapper (7.7.26015): starting
05:37:10 (786610): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 05:37:10] Arguments: --nthreads 8
[2026-04-21 05:37:10] Threads: 8
[2026-04-21 05:37:10] Checking for CVMFS
[2026-04-21 05:37:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:37:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:37:10] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:37:11] 2.13.3.0 9863 239984 213584 158685 0 481 19790655 32935937 15728 16776704 0 1057218452 99.711 802118993 32150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 05:37:11] CVMFS is ok
[2026-04-21 05:37:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:37:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:37:11] Further information can be found at the LHC@home message board.
[2026-04-21 05:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:37:11] Checking for apptainer binary...
[2026-04-21 05:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:37:11] Running /usr/bin/apptainer --version
[2026-04-21 05:37:11] apptainer version 1.4.5-2.el9
[2026-04-21 05:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:37:11] c-5-3.aglt2.org
[2026-04-21 05:37:11] apptainer works
[2026-04-21 05:37:11] Set ATHENA_PROC_NUMBER=8
[2026-04-21 05:37:11] Set ATHENA_CORE_NUMBER=8
[2026-04-21 05:37:11] Starting ATLAS job with PandaID=7105168860
[2026-04-21 05:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 15:14:12]  *** The last 200 lines of the pilot log: ***
[2026-04-21 15:14:12] 2026-04-21 19:12:51,669 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105168860/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 15:14:12] 2026-04-21 19:12:51,670 | INFO     | extracted standard info from prmon json
[2026-04-21 15:14:12] 2026-04-21 19:12:51,670 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 15:14:12] 2026-04-21 19:12:51,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 15:14:12] 2026-04-21 19:12:51,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 15:14:12] 2026-04-21 19:12:51,713 | INFO     | fitting pss+swap vs Time
[2026-04-21 15:14:12] 2026-04-21 19:12:51,738 | INFO     | sum of square deviations: 55927978670.83892
[2026-04-21 15:14:12] 2026-04-21 19:12:51,768 | INFO     | sum of deviations: 63026040684.4567
[2026-04-21 15:14:12] 2026-04-21 19:12:51,769 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:51,769 | INFO     | mean y: 2560778.2973451326
[2026-04-21 15:14:12] 2026-04-21 19:12:51,789 | INFO     | intersect: 2560778.2973451326
[2026-04-21 15:14:12] 2026-04-21 19:12:51,790 | INFO     | chi2: 2.557569131399103
[2026-04-21 15:14:12] 2026-04-21 19:12:51,791 | INFO     | sum of square deviations: 54456303955.78422
[2026-04-21 15:14:12] 2026-04-21 19:12:51,828 | INFO     | sum of deviations: 99211818479.9858
[2026-04-21 15:14:12] 2026-04-21 19:12:51,828 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:51,828 | INFO     | mean y: 2564500.2714285715
[2026-04-21 15:14:12] 2026-04-21 19:12:51,828 | INFO     | intersect: 2564500.2714285715
[2026-04-21 15:14:12] 2026-04-21 19:12:51,829 | INFO     | chi2: 1.8382670323349428
[2026-04-21 15:14:12] 2026-04-21 19:12:51,829 | INFO     | current chi2=1.8382670323349428 (change=28.124444036852697 %)
[2026-04-21 15:14:12] 2026-04-21 19:12:51,830 | INFO     | sum of square deviations: 53010607917.14609
[2026-04-21 15:14:12] 2026-04-21 19:12:51,867 | INFO     | sum of deviations: 97652977983.55147
[2026-04-21 15:14:12] 2026-04-21 19:12:51,867 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:51,867 | INFO     | mean y: 2564335.8324324326
[2026-04-21 15:14:12] 2026-04-21 19:12:51,867 | INFO     | intersect: 2564335.8324324326
[2026-04-21 15:14:12] 2026-04-21 19:12:51,868 | INFO     | chi2: 1.8384632438465365
[2026-04-21 15:14:12] 2026-04-21 19:12:51,868 | INFO     | current chi2=1.8384632438465365 (change=-0.010673721942585932 %)
[2026-04-21 15:14:12] 2026-04-21 19:12:51,868 | INFO     | right removable region: 554
[2026-04-21 15:14:12] 2026-04-21 19:12:51,885 | INFO     | sum of square deviations: 54456267965.784225
[2026-04-21 15:14:12] 2026-04-21 19:12:51,897 | INFO     | sum of deviations: -37475567756.950005
[2026-04-21 15:14:12] 2026-04-21 19:12:51,897 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:51,897 | INFO     | mean y: 2571156.05
[2026-04-21 15:14:12] 2026-04-21 19:12:51,898 | INFO     | intersect: 2571156.05
[2026-04-21 15:14:12] 2026-04-21 19:12:51,933 | INFO     | chi2: 0.9572907031807476
[2026-04-21 15:14:12] 2026-04-21 19:12:51,933 | INFO     | current chi2=0.9572907031807476 (change=62.57029022487978 %)
[2026-04-21 15:14:12] 2026-04-21 19:12:51,934 | INFO     | sum of square deviations: 53010638175.93842
[2026-04-21 15:14:12] 2026-04-21 19:12:51,970 | INFO     | sum of deviations: -43238564483.51712
[2026-04-21 15:14:12] 2026-04-21 19:12:51,970 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:51,971 | INFO     | mean y: 2571760.6468468467
[2026-04-21 15:14:12] 2026-04-21 19:12:51,971 | INFO     | intersect: 2571760.6468468467
[2026-04-21 15:14:12] 2026-04-21 19:12:51,972 | INFO     | chi2: 0.9476897229970366
[2026-04-21 15:14:12] 2026-04-21 19:12:51,972 | INFO     | current chi2=0.9476897229970366 (change=1.0029325628892325 %)
[2026-04-21 15:14:12] 2026-04-21 19:12:51,972 | INFO     | left removable region: 10
[2026-04-21 15:14:12] 2026-04-21 19:12:51,973 | INFO     | sum of square deviations: 49920728678.23521
[2026-04-21 15:14:12] 2026-04-21 19:12:52,022 | INFO     | sum of deviations: -7463076577.588234
[2026-04-21 15:14:12] 2026-04-21 19:12:52,022 | INFO     | mean x (centered): 0.0
[2026-04-21 15:14:12] 2026-04-21 19:12:52,022 | INFO     | mean y: 2575572.992647059
[2026-04-21 15:14:12] 2026-04-21 19:12:52,022 | INFO     | intersect: 2575572.992647059
[2026-04-21 15:14:12] 2026-04-21 19:12:52,027 | INFO     | chi2: 0.2204527963334034
[2026-04-21 15:14:12] 2026-04-21 19:12:52,028 | INFO     | current memory leak: -0.15 B/s (using 544 data points, chi2=0.22)
[2026-04-21 15:14:12] 2026-04-21 19:12:52,028 | INFO     | could have reported an average CPU frequency of 2600 MHz (23 samples)
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | ..............................
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . Timing measurements:
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . get job = 0 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . initial setup = 13 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . payload setup = 26 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . stage-in = 0 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . payload execution = 34465 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . stage-out = 3 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | . log creation = 0 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,029 | INFO     | ..............................
[2026-04-21 15:14:12] 2026-04-21 19:12:52,238 | INFO     | PID=790875 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 15:14:12] 2026-04-21 19:12:52,239 | INFO     | .. there are 14 such processes running
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | 
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | job summary report
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | --------------------------------------------------
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | PanDA job id: 7105168860
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | task id: 49820244
[2026-04-21 15:14:12] 2026-04-21 19:12:52,344 | INFO     | errors: (none)
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | pilot state: finished 
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | transexitcode: 0
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | exeerrorcode: 0
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | exeerrordiag: 
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | exitcode: 0
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | exitmsg: OK
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | cpuconsumptiontime: 87233 s
[2026-04-21 15:14:12] 2026-04-21 19:12:52,345 | INFO     | nevents: 400
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | neventsw: 0
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | pid: 799494
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | pgrp: 799494
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | corecount: 8
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | event service: False
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | sizes: {0: 2281498, 1: 2283383, 34496: 2323893, 34497: 2323892, 34500: 2325968, 34501: 2326024, 34504: 2326346}
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | --------------------------------------------------
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | 
[2026-04-21 15:14:12] 2026-04-21 19:12:52,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-21 15:14:12] 2026-04-21 19:12:52,453 | INFO     | number of running child processes to parent process 799494: 1
[2026-04-21 15:14:12] 2026-04-21 19:12:52,454 | INFO     | maximum number of monitored processes: 6
[2026-04-21 15:14:12] 2026-04-21 19:12:52,454 | INFO     | aborting job monitoring since job object (job id=7105168860) has expired
[2026-04-21 15:14:12] 2026-04-21 19:12:52,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 15:14:12] 2026-04-21 19:12:52,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 15:14:12] 2026-04-21 19:12:52,594 | INFO     | job 7105168860 has completed (purged errors)
[2026-04-21 15:14:12] 2026-04-21 19:12:52,594 | INFO     | overall cleanup function is called
[2026-04-21 15:14:12] 2026-04-21 19:12:53,612 | INFO     | --- collectZombieJob: --- 10, [799494]
[2026-04-21 15:14:12] 2026-04-21 19:12:53,612 | INFO     | zombie collector waiting for pid 799494
[2026-04-21 15:14:12] 2026-04-21 19:12:53,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 15:14:12] 2026-04-21 19:12:53,613 | INFO     | collected zombie processes
[2026-04-21 15:14:12] 2026-04-21 19:12:53,613 | INFO     | will attempt to kill all subprocesses of pid=799494
[2026-04-21 15:14:12] 2026-04-21 19:12:54,496 | INFO     | process IDs to be killed: [799494] (in reverse order)
[2026-04-21 15:14:12] 2026-04-21 19:12:54,745 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 15:14:12] 2026-04-21 19:12:54,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 15:14:12] 2026-04-21 19:12:54,789 | INFO     | did not find any defunct processes belonging to 799494
[2026-04-21 15:14:12] 2026-04-21 19:12:54,815 | INFO     | did not find any defunct processes belonging to 799494
[2026-04-21 15:14:12] 2026-04-21 19:12:54,815 | INFO     | Ready for new job
[2026-04-21 15:14:12] 2026-04-21 19:12:54,818 | INFO     | **************************************
[2026-04-21 15:14:12] 2026-04-21 19:12:54,818 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 15:14:12] 2026-04-21 19:12:54,818 | INFO     | **************************************
[2026-04-21 15:14:12] 2026-04-21 19:12:54,818 | INFO     | 
[2026-04-21 15:14:12] 2026-04-21 19:12:54,825 | INFO     | architecture information:
[2026-04-21 15:14:12] 2026-04-21 19:12:54,825 | INFO     | executing command: cat /etc/os-release
[2026-04-21 15:14:12] 2026-04-21 19:12:54,864 | INFO     | cat /etc/os-release:
[2026-04-21 15:14:12] NAME="CentOS Linux"
[2026-04-21 15:14:12] VERSION="7 (Core)"
[2026-04-21 15:14:12] ID="centos"
[2026-04-21 15:14:12] ID_LIKE="rhel fedora"
[2026-04-21 15:14:12] VERSION_ID="7"
[2026-04-21 15:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 15:14:12] ANSI_COLOR="0;31"
[2026-04-21 15:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 15:14:12] HOME_URL="https://www.centos.org/"
[2026-04-21 15:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 15:14:12] 
[2026-04-21 15:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 15:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 15:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 15:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 15:14:12] 
[2026-04-21 15:14:12] 2026-04-21 19:12:54,865 | INFO     | **************************************
[2026-04-21 15:14:12] 2026-04-21 19:12:55,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-21 15:14:12] 2026-04-21 19:12:55,437 | INFO     | sufficient remaining disk space (67581771776 B)
[2026-04-21 15:14:12] 2026-04-21 19:12:55,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 15:14:12] 2026-04-21 19:12:55,438 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 15:14:12] 2026-04-21 19:12:55,438 | INFO     | update_server=False
[2026-04-21 15:14:12] 2026-04-21 19:12:55,438 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 15:14:12] 2026-04-21 19:12:55,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 15:14:12] 2026-04-21 19:12:55,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 15:14:12] 2026-04-21 19:12:55,993 | INFO     | aborting loop
[2026-04-21 15:14:12] 2026-04-21 19:12:56,254 | INFO     | all job control threads have been joined
[2026-04-21 15:14:12] 2026-04-21 19:12:56,255 | INFO     | all data control threads have been joined
[2026-04-21 15:14:12] 2026-04-21 19:12:56,359 | INFO     | all payload control threads have been joined
[2026-04-21 15:14:12] 2026-04-21 19:12:56,444 | INFO     | [job] retrieve thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:56,558 | INFO     | [data] copytool_in thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:56,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 15:14:12] 2026-04-21 19:12:56,998 | INFO     | [job] job monitor thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,262 | INFO     | [job] control thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,263 | INFO     | [data] control thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,287 | INFO     | [payload] validate_post thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,366 | INFO     | [payload] control thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,404 | INFO     | [payload] failed_post thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 15:14:12] 2026-04-21 19:12:57,581 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,621 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,771 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:57,772 | INFO     | [job] validate thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:58,447 | INFO     | [job] queue monitor thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:58,708 | INFO     | [data] copytool_out thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:12:59,624 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:13:05,666 | INFO     | job.realtimelogging is not enabled
[2026-04-21 15:14:12] 2026-04-21 19:13:06,672 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 15:14:12] 2026-04-21 19:13:25,379 | INFO     | PID=790875 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 15:14:12] 2026-04-21 19:13:25,379 | INFO     | .. there are 14 such processes running
[2026-04-21 15:14:12] 2026-04-21 19:13:25,380 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 15:14:12] 2026-04-21 19:13:25,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 15:14:12] 2026-04-21 19:13:25,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 15:14:12] 2026-04-21 19:13:45,946 | INFO     | [monitor] cgroup control has ended
[2026-04-21 15:14:12] 2026-04-21 19:13:46,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938151958336)>', '<ExcThread(monitor, started 139937668126464)>']
[2026-04-21 15:14:12] 2026-04-21 19:13:46,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 15:14:12] 2026-04-21 19:13:46,613 | INFO     | [monitor] control thread has ended
[2026-04-21 15:14:12] 2026-04-21 19:13:51,494 | INFO     | all workflow threads have been joined
[2026-04-21 15:14:12] 2026-04-21 19:13:51,494 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 15:14:12] 2026-04-21 19:13:51,495 | INFO     | traces error code: 0
[2026-04-21 15:14:12] 2026-04-21 19:13:51,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 15:14:12] 2026-04-21 19:13:52,146 [wrapper] ==== pilot stdout END ====
[2026-04-21 15:14:12] 2026-04-21 19:13:52,149 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 15:14:12] 2026-04-21 19:13:52,152 [wrapper] pilotpid: 790875
[2026-04-21 15:14:12] 2026-04-21 19:13:52,155 [wrapper] Pilot exit status: 0
[2026-04-21 15:14:12] 2026-04-21 19:13:52,282 [wrapper] pandaids: 7105168860
[2026-04-21 15:14:12] 2026-04-21 19:13:52,395 [wrapper] cleanup supervisor_pilot 3122328 790876
[2026-04-21 15:14:12] 2026-04-21 19:13:52,450 [wrapper] Test setup, not cleaning
[2026-04-21 15:14:12] 2026-04-21 19:13:52,483 [wrapper] apfmon messages muted
[2026-04-21 15:14:12] 2026-04-21 19:13:52,528 [wrapper] ==== wrapper stdout END ====
[2026-04-21 15:14:12] 2026-04-21 19:13:52,584 [wrapper] ==== wrapper stderr END ====
[2026-04-21 15:14:12]  *** Error codes and diagnostics ***
[2026-04-21 15:14:12]     "exeErrorCode": 0,
[2026-04-21 15:14:12]     "pilotErrorCode": 0,
[2026-04-21 15:14:12]  *** Listing of results directory ***
[2026-04-21 15:14:12] total 2459376
[2026-04-21 15:14:12] -rwx------. 1 boincer umatlas      36322 Apr 21 03:43 runpilot2-wrapper.sh
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 04:49 queuedata.json
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 15:14:12] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:37 run_atlas
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:37 job.xml
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas 2236782835 Apr 21 05:37 EVNT.49820242._000039.pool.root.1
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:37 start_atlas.sh
[2026-04-21 15:14:12] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:37 shared
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 05:37 input.tar.gz
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:37 boinc_lockfile
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas       2550 Apr 21 05:37 pandaJob.out
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas         57 Apr 21 05:37 setup.sh.local
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas     995850 Apr 21 05:37 agis_schedconf.cvmfs.json
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas        439 Apr 21 05:37 workernode_map.json
[2026-04-21 15:14:12] drwx------. 5 boincer umatlas       4096 Apr 21 05:37 pilot3
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas  270388826 Apr 21 15:11 HITS.49820244._013476.pool.root.1
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas        489 Apr 21 15:11 boinc_task_state.xml
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas       1063 Apr 21 15:12 memory_monitor_summary.json
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas    1509089 Apr 21 15:12 agis_ddmendpoints.agis.ALL.json
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas     576486 Apr 21 15:12 log.49820244._013476.job.log.tgz.1
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas       6439 Apr 21 15:12 heartbeat_new.json
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas       6330 Apr 21 15:12 heartbeat.json
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas       6621 Apr 21 15:13 init_data.xml
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas         95 Apr 21 15:13 pilot_heartbeat.json
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas       4890 Apr 21 15:13 pilotlog.txt
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas    3009119 Apr 21 15:13 log.49820244._013476.job.log.1
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas        357 Apr 21 15:13 output.list
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas        410 Apr 21 15:13 runtime_log
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas    3604480 Apr 21 15:13 result.tar.gz
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas       8949 Apr 21 15:13 runtime_log.err
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas        660 Apr 21 15:13 2aa9a501b77a.diag
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 15:14 boinc_mmap_file
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas         28 Apr 21 15:14 wrapper_checkpoint.txt
[2026-04-21 15:14:12] -rw-r--r--. 1 boincer umatlas      21101 Apr 21 15:14 stderr.txt
[2026-04-21 15:14:12] HITS file was successfully produced:
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas 270388826 Apr 21 15:11 shared/HITS.pool.root.1
[2026-04-21 15:14:12]  *** Contents of shared directory: ***
[2026-04-21 15:14:12] total 2452600
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas 2236782835 Apr 21 05:37 ATLAS.root_0
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:37 start_atlas.sh
[2026-04-21 15:14:12] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 05:37 input.tar.gz
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas  270388826 Apr 21 15:11 HITS.pool.root.1
[2026-04-21 15:14:12] -rw-------. 1 boincer umatlas    3604480 Apr 21 15:13 result.tar.gz
15:14:14 (786610): run_atlas exited; CPU time 88504.362310
15:14:14 (786610): called boinc_finish(0)

</stderr_txt>
]]>

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