Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:28 (613768): wrapper (7.7.26015): starting
05:00:28 (613768): wrapper: running run_atlas (--nthreads 11)
[2026-04-21 05:00:28] Arguments: --nthreads 11
[2026-04-21 05:00:28] Threads: 11
[2026-04-21 05:00:28] Checking for CVMFS
[2026-04-21 05:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:00:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:00:28] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:00:28] 2.13.3.0 9863 239948 225864 158683 0 834 18962152 32935937 14648 16776704 0 1056342588 99.711 801797826 32146 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 05:00:28] CVMFS is ok
[2026-04-21 05:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:00:28] Further information can be found at the LHC@home message board.
[2026-04-21 05:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:00:28] Checking for apptainer binary...
[2026-04-21 05:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:00:28] Running /usr/bin/apptainer --version
[2026-04-21 05:00:28] apptainer version 1.4.5-2.el9
[2026-04-21 05:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:00:28] c-5-3.aglt2.org
[2026-04-21 05:00:28] apptainer works
[2026-04-21 05:00:28] Set ATHENA_PROC_NUMBER=11
[2026-04-21 05:00:28] Set ATHENA_CORE_NUMBER=11
[2026-04-21 05:00:29] Starting ATLAS job with PandaID=7105104251
[2026-04-21 05:00:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 13:33:01]  *** The last 200 lines of the pilot log: ***
[2026-04-21 13:33:01] 2026-04-21 17:32:27,913 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-21 13:33:01] 2026-04-21 17:32:27,913 | INFO     | this job has now completed (state=finished)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,913 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,914 | INFO     | log transfer has been attempted: DONE
[2026-04-21 13:33:01] 2026-04-21 17:32:27,914 | INFO     | job 7105104251 has finished - writing final server update
[2026-04-21 13:33:01] 2026-04-21 17:32:27,914 | INFO     | total number of processed events: 400 (read)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,922 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7105104251/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,922 | INFO     | extracted standard info from prmon json
[2026-04-21 13:33:01] 2026-04-21 17:32:27,923 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 13:33:01] 2026-04-21 17:32:27,923 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 13:33:01] 2026-04-21 17:32:27,923 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 13:33:01] 2026-04-21 17:32:27,932 | INFO     | fitting pss+swap vs Time
[2026-04-21 13:33:01] 2026-04-21 17:32:27,933 | INFO     | sum of square deviations: 39462751751.70204
[2026-04-21 13:33:01] 2026-04-21 17:32:27,940 | INFO     | sum of deviations: 94407027292.77116
[2026-04-21 13:33:01] 2026-04-21 17:32:27,940 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,940 | INFO     | mean y: 2704269.9184890655
[2026-04-21 13:33:01] 2026-04-21 17:32:27,941 | INFO     | intersect: 2704269.9184890655
[2026-04-21 13:33:01] 2026-04-21 17:32:27,941 | INFO     | chi2: 2.412954397093096
[2026-04-21 13:33:01] 2026-04-21 17:32:27,942 | INFO     | sum of square deviations: 38297614694.178856
[2026-04-21 13:33:01] 2026-04-21 17:32:27,950 | INFO     | sum of deviations: 132246221300.31526
[2026-04-21 13:33:01] 2026-04-21 17:32:27,950 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,950 | INFO     | mean y: 2709181.564257028
[2026-04-21 13:33:01] 2026-04-21 17:32:27,950 | INFO     | intersect: 2709181.564257028
[2026-04-21 13:33:01] 2026-04-21 17:32:27,951 | INFO     | chi2: 1.524751308827248
[2026-04-21 13:33:01] 2026-04-21 17:32:27,951 | INFO     | current chi2=1.524751308827248 (change=36.80977515927664 %)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,952 | INFO     | sum of square deviations: 37155640861.655266
[2026-04-21 13:33:01] 2026-04-21 17:32:27,959 | INFO     | sum of deviations: 130725529223.44847
[2026-04-21 13:33:01] 2026-04-21 17:32:27,959 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,959 | INFO     | mean y: 2708978.486815416
[2026-04-21 13:33:01] 2026-04-21 17:32:27,960 | INFO     | intersect: 2708978.486815416
[2026-04-21 13:33:01] 2026-04-21 17:32:27,960 | INFO     | chi2: 1.5247316183231365
[2026-04-21 13:33:01] 2026-04-21 17:32:27,961 | INFO     | current chi2=1.5247316183231365 (change=0.0012913911926123042 %)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,961 | INFO     | right removable region: 492
[2026-04-21 13:33:01] 2026-04-21 17:32:27,962 | INFO     | sum of square deviations: 38297593954.17888
[2026-04-21 13:33:01] 2026-04-21 17:32:27,970 | INFO     | sum of deviations: 2480441891.7570267
[2026-04-21 13:33:01] 2026-04-21 17:32:27,970 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,970 | INFO     | mean y: 2716257.8453815263
[2026-04-21 13:33:01] 2026-04-21 17:32:27,970 | INFO     | intersect: 2716257.8453815263
[2026-04-21 13:33:01] 2026-04-21 17:32:27,971 | INFO     | chi2: 0.9524797969369176
[2026-04-21 13:33:01] 2026-04-21 17:32:27,971 | INFO     | current chi2=0.9524797969369176 (change=60.526407043399686 %)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,972 | INFO     | sum of square deviations: 37155599381.65526
[2026-04-21 13:33:01] 2026-04-21 17:32:27,979 | INFO     | sum of deviations: -10671124228.655163
[2026-04-21 13:33:01] 2026-04-21 17:32:27,980 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,980 | INFO     | mean y: 2718003.695740365
[2026-04-21 13:33:01] 2026-04-21 17:32:27,980 | INFO     | intersect: 2718003.695740365
[2026-04-21 13:33:01] 2026-04-21 17:32:27,981 | INFO     | chi2: 0.9090237758701142
[2026-04-21 13:33:01] 2026-04-21 17:32:27,981 | INFO     | current chi2=0.9090237758701142 (change=4.562408694289768 %)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,981 | INFO     | left removable region: 10
[2026-04-21 13:33:01] 2026-04-21 17:32:27,982 | INFO     | sum of square deviations: 34723645434.10186
[2026-04-21 13:33:01] 2026-04-21 17:32:27,989 | INFO     | sum of deviations: 26914594644.045647
[2026-04-21 13:33:01] 2026-04-21 17:32:27,989 | INFO     | mean x (centered): 0.0
[2026-04-21 13:33:01] 2026-04-21 17:32:27,989 | INFO     | mean y: 2723081.4398340248
[2026-04-21 13:33:01] 2026-04-21 17:32:27,989 | INFO     | intersect: 2723081.4398340248
[2026-04-21 13:33:01] 2026-04-21 17:32:27,990 | INFO     | chi2: 0.011071514005788307
[2026-04-21 13:33:01] 2026-04-21 17:32:27,991 | INFO     | current memory leak: 0.78 B/s (using 482 data points, chi2=0.01)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,991 | INFO     | could have reported an average CPU frequency of 2660 MHz (20 samples)
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | ..............................
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . Timing measurements:
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . get job = 0 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . initial setup = 6 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . payload setup = 8 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . stage-in = 0 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . payload execution = 30673 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . stage-out = 2 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,992 | INFO     | . log creation = 0 s
[2026-04-21 13:33:01] 2026-04-21 17:32:27,993 | INFO     | ..............................
[2026-04-21 13:33:01] 2026-04-21 17:32:28,381 | INFO     | 
[2026-04-21 13:33:01] 2026-04-21 17:32:28,381 | INFO     | job summary report
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | --------------------------------------------------
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | PanDA job id: 7105104251
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | task id: 49820375
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | errors: (none)
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | pilot state: finished 
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | transexitcode: 0
[2026-04-21 13:33:01] 2026-04-21 17:32:28,382 | INFO     | exeerrorcode: 0
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | exeerrordiag: 
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | exitcode: 0
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | exitmsg: OK
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | cpuconsumptiontime: 88416 s
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | nevents: 400
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | neventsw: 0
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | pid: 631689
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | pgrp: 631689
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | corecount: 11
[2026-04-21 13:33:01] 2026-04-21 17:32:28,383 | INFO     | event service: False
[2026-04-21 13:33:01] 2026-04-21 17:32:28,384 | INFO     | sizes: {0: 2281818, 1: 2283392, 11: 2283420, 30686: 2321997, 30687: 2321996, 30689: 2324072, 30690: 2324256, 30693: 2324450}
[2026-04-21 13:33:01] 2026-04-21 17:32:28,384 | INFO     | --------------------------------------------------
[2026-04-21 13:33:01] 2026-04-21 17:32:28,384 | INFO     | 
[2026-04-21 13:33:01] 2026-04-21 17:32:28,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-21 13:33:01] 2026-04-21 17:32:28,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | job 7105104251 has completed (purged errors)
[2026-04-21 13:33:01] 2026-04-21 17:32:28,406 | INFO     | overall cleanup function is called
[2026-04-21 13:33:01] 2026-04-21 17:32:29,419 | INFO     | --- collectZombieJob: --- 10, [631689]
[2026-04-21 13:33:01] 2026-04-21 17:32:29,420 | INFO     | zombie collector waiting for pid 631689
[2026-04-21 13:33:01] 2026-04-21 17:32:29,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 13:33:01] 2026-04-21 17:32:29,420 | INFO     | collected zombie processes
[2026-04-21 13:33:01] 2026-04-21 17:32:29,420 | INFO     | will attempt to kill all subprocesses of pid=631689
[2026-04-21 13:33:01] 2026-04-21 17:32:29,757 | INFO     | process IDs to be killed: [631689] (in reverse order)
[2026-04-21 13:33:01] 2026-04-21 17:32:29,861 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 13:33:01] 2026-04-21 17:32:29,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 13:33:01] 2026-04-21 17:32:29,877 | INFO     | did not find any defunct processes belonging to 631689
[2026-04-21 13:33:01] 2026-04-21 17:32:29,894 | INFO     | did not find any defunct processes belonging to 631689
[2026-04-21 13:33:01] 2026-04-21 17:32:29,894 | INFO     | Ready for new job
[2026-04-21 13:33:01] 2026-04-21 17:32:29,896 | INFO     | **************************************
[2026-04-21 13:33:01] 2026-04-21 17:32:29,897 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 13:33:01] 2026-04-21 17:32:29,897 | INFO     | **************************************
[2026-04-21 13:33:01] 2026-04-21 17:32:29,897 | INFO     | 
[2026-04-21 13:33:01] 2026-04-21 17:32:29,899 | INFO     | architecture information:
[2026-04-21 13:33:01] 2026-04-21 17:32:29,899 | INFO     | executing command: cat /etc/os-release
[2026-04-21 13:33:01] 2026-04-21 17:32:29,915 | INFO     | cat /etc/os-release:
[2026-04-21 13:33:01] NAME="CentOS Linux"
[2026-04-21 13:33:01] VERSION="7 (Core)"
[2026-04-21 13:33:01] ID="centos"
[2026-04-21 13:33:01] ID_LIKE="rhel fedora"
[2026-04-21 13:33:01] VERSION_ID="7"
[2026-04-21 13:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 13:33:01] ANSI_COLOR="0;31"
[2026-04-21 13:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 13:33:01] HOME_URL="https://www.centos.org/"
[2026-04-21 13:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 13:33:01] 
[2026-04-21 13:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 13:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 13:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 13:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 13:33:01] 
[2026-04-21 13:33:01] 2026-04-21 17:32:29,915 | INFO     | **************************************
[2026-04-21 13:33:01] 2026-04-21 17:32:30,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-21 13:33:01] 2026-04-21 17:32:30,436 | INFO     | sufficient remaining disk space (62996348928 B)
[2026-04-21 13:33:01] 2026-04-21 17:32:30,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 13:33:01] 2026-04-21 17:32:30,436 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 13:33:01] 2026-04-21 17:32:30,437 | INFO     | update_server=False
[2026-04-21 13:33:01] 2026-04-21 17:32:30,437 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 13:33:01] 2026-04-21 17:32:30,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:33:01] 2026-04-21 17:32:30,439 | INFO     | aborting loop
[2026-04-21 13:33:01] 2026-04-21 17:32:30,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 13:33:01] 2026-04-21 17:32:31,100 | INFO     | all job control threads have been joined
[2026-04-21 13:33:01] 2026-04-21 17:32:31,206 | INFO     | all data control threads have been joined
[2026-04-21 13:33:01] 2026-04-21 17:32:31,262 | INFO     | all payload control threads have been joined
[2026-04-21 13:33:01] 2026-04-21 17:32:31,452 | INFO     | [job] retrieve thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:31,453 | INFO     | [job] job monitor thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:31,583 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:31,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 13:33:01] 2026-04-21 17:32:31,845 | INFO     | [job] validate thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,105 | INFO     | [job] control thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,205 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,212 | INFO     | [data] control thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,270 | INFO     | [payload] control thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,427 | INFO     | [payload] failed_post thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,458 | INFO     | [data] copytool_out thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,690 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,702 | INFO     | [payload] validate_post thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:32,881 | INFO     | [data] copytool_in thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:33,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:33:01] 2026-04-21 17:32:34,115 | INFO     | [job] queue monitor thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:35,813 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 13:33:01] 2026-04-21 17:32:38,767 | INFO     | [monitor] cgroup control has ended
[2026-04-21 13:33:01] 2026-04-21 17:32:40,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547867453248)>', '<ExcThread(monitor, started 140547092113152)>']
[2026-04-21 13:33:01] 2026-04-21 17:32:45,359 | INFO     | all workflow threads have been joined
[2026-04-21 13:33:01] 2026-04-21 17:32:45,360 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 13:33:01] 2026-04-21 17:32:45,360 | INFO     | traces error code: 0
[2026-04-21 13:33:01] 2026-04-21 17:32:45,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 13:33:01] 2026-04-21 17:33:01,621 | INFO     | PID=620180 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 13:33:01] 2026-04-21 17:33:01,621 | INFO     | .. there are 19 such processes running
[2026-04-21 13:33:01] 2026-04-21 17:33:01,622 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 13:33:01] 2026-04-21 17:33:01,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 13:33:01] 2026-04-21 17:33:01,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 13:33:01] 2026-04-21 17:33:01,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 13:33:01] 2026-04-21 17:33:01,623 | INFO     | [monitor] control thread has ended
[2026-04-21 13:33:01] 2026-04-21 17:33:01,759 [wrapper] ==== pilot stdout END ====
[2026-04-21 13:33:01] 2026-04-21 17:33:01,762 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 13:33:01] 2026-04-21 17:33:01,765 [wrapper] pilotpid: 620180
[2026-04-21 13:33:01] 2026-04-21 17:33:01,770 [wrapper] Pilot exit status: 0
[2026-04-21 13:33:01] 2026-04-21 17:33:01,780 [wrapper] pandaids: 7105104251
[2026-04-21 13:33:01] 2026-04-21 17:33:01,843 [wrapper] cleanup supervisor_pilot 2831341 620181
[2026-04-21 13:33:01] 2026-04-21 17:33:01,847 [wrapper] Test setup, not cleaning
[2026-04-21 13:33:01] 2026-04-21 17:33:01,850 [wrapper] apfmon messages muted
[2026-04-21 13:33:01] 2026-04-21 17:33:01,859 [wrapper] ==== wrapper stdout END ====
[2026-04-21 13:33:01] 2026-04-21 17:33:01,862 [wrapper] ==== wrapper stderr END ====
[2026-04-21 13:33:01]  *** Error codes and diagnostics ***
[2026-04-21 13:33:01]     "exeErrorCode": 0,
[2026-04-21 13:33:01]     "pilotErrorCode": 0,
[2026-04-21 13:33:01]  *** Listing of results directory ***
[2026-04-21 13:33:01] total 2450464
[2026-04-21 13:33:01] -rwx------. 1 boincer umatlas      36322 Apr 21 03:43 runpilot2-wrapper.sh
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 04:49 queuedata.json
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 13:33:01] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:00 run_atlas
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:00 job.xml
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas 2233258122 Apr 21 05:00 EVNT.49820373._000018.pool.root.1
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:00 start_atlas.sh
[2026-04-21 13:33:01] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:00 shared
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas     656938 Apr 21 05:00 input.tar.gz
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:00 boinc_lockfile
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 05:00 pandaJob.out
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas         57 Apr 21 05:00 setup.sh.local
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas     995850 Apr 21 05:00 agis_schedconf.cvmfs.json
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas        431 Apr 21 05:00 workernode_map.json
[2026-04-21 13:33:01] drwx------. 5 boincer umatlas       4096 Apr 21 05:00 pilot3
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas       6622 Apr 21 13:30 init_data.xml
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas  265090828 Apr 21 13:31 HITS.49820375._009822.pool.root.1
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas        489 Apr 21 13:31 boinc_task_state.xml
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas       1055 Apr 21 13:32 memory_monitor_summary.json
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas    1509089 Apr 21 13:32 agis_ddmendpoints.agis.ALL.json
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas     742781 Apr 21 13:32 log.49820375._009822.job.log.tgz.1
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas       6415 Apr 21 13:32 heartbeat_new.json
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas       6306 Apr 21 13:32 heartbeat.json
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 13:32 boinc_mmap_file
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas         28 Apr 21 13:32 wrapper_checkpoint.txt
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas        822 Apr 21 13:33 pilotlog.txt
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas         95 Apr 21 13:33 pilot_heartbeat.json
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas    2690923 Apr 21 13:33 log.49820375._009822.job.log.1
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas        357 Apr 21 13:33 output.list
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas        410 Apr 21 13:33 runtime_log
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas    3450880 Apr 21 13:33 result.tar.gz
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas       8951 Apr 21 13:33 runtime_log.err
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas        659 Apr 21 13:33 2aa3579e0c74.diag
[2026-04-21 13:33:01] -rw-r--r--. 1 boincer umatlas      21059 Apr 21 13:33 stderr.txt
[2026-04-21 13:33:01] HITS file was successfully produced:
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas 265090828 Apr 21 13:31 shared/HITS.pool.root.1
[2026-04-21 13:33:01]  *** Contents of shared directory: ***
[2026-04-21 13:33:01] total 2443840
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas 2233258122 Apr 21 05:00 ATLAS.root_0
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:00 start_atlas.sh
[2026-04-21 13:33:01] -rw-r--r--. 2 boincer umatlas     656938 Apr 21 05:00 input.tar.gz
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas  265090828 Apr 21 13:31 HITS.pool.root.1
[2026-04-21 13:33:01] -rw-------. 1 boincer umatlas    3450880 Apr 21 13:33 result.tar.gz
13:33:03 (613768): run_atlas exited; CPU time 89683.460652
13:33:03 (613768): called boinc_finish(0)

</stderr_txt>
]]>

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