Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:16 (609798): wrapper (7.7.26015): starting
05:00:16 (609798): wrapper: running run_atlas (--nthreads 11)
[2026-04-21 05:00:17] Arguments: --nthreads 11
[2026-04-21 05:00:17] Threads: 11
[2026-04-21 05:00:17] Checking for CVMFS
[2026-04-21 05:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:00:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:00:17] 2.13.3.0 9863 239947 225600 158683 1 831 18941217 32935936 14562 16776704 0 1056323350 99.711 801789808 32146 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 05:00:17] CVMFS is ok
[2026-04-21 05:00:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:00:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:00:17] Further information can be found at the LHC@home message board.
[2026-04-21 05:00:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:00:17] Checking for apptainer binary...
[2026-04-21 05:00:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:00:17] Running /usr/bin/apptainer --version
[2026-04-21 05:00:17] apptainer version 1.4.5-2.el9
[2026-04-21 05:00:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:00:17] c-5-3.aglt2.org
[2026-04-21 05:00:17] apptainer works
[2026-04-21 05:00:17] Set ATHENA_PROC_NUMBER=11
[2026-04-21 05:00:17] Set ATHENA_CORE_NUMBER=11
[2026-04-21 05:00:17] Starting ATLAS job with PandaID=7105104260
[2026-04-21 05:00:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 13:31:33]  *** The last 200 lines of the pilot log: ***
[2026-04-21 13:31:33] 2026-04-21 17:30:49,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,255 | INFO     | log transfer has been attempted: DONE
[2026-04-21 13:31:33] 2026-04-21 17:30:49,256 | INFO     | job 7105104260 has finished - writing final server update
[2026-04-21 13:31:33] 2026-04-21 17:30:49,256 | INFO     | total number of processed events: 400 (read)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,264 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105104260/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,265 | INFO     | extracted standard info from prmon json
[2026-04-21 13:31:33] 2026-04-21 17:30:49,265 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 13:31:33] 2026-04-21 17:30:49,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 13:31:33] 2026-04-21 17:30:49,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 13:31:33] 2026-04-21 17:30:49,276 | INFO     | fitting pss+swap vs Time
[2026-04-21 13:31:33] 2026-04-21 17:30:49,277 | INFO     | sum of square deviations: 39227748363.46024
[2026-04-21 13:31:33] 2026-04-21 17:30:49,284 | INFO     | sum of deviations: 114006239567.57146
[2026-04-21 13:31:33] 2026-04-21 17:30:49,284 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,284 | INFO     | mean y: 2707737.185258964
[2026-04-21 13:31:33] 2026-04-21 17:30:49,284 | INFO     | intersect: 2707737.185258964
[2026-04-21 13:31:33] 2026-04-21 17:30:49,285 | INFO     | chi2: 2.246269900665981
[2026-04-21 13:31:33] 2026-04-21 17:30:49,286 | INFO     | sum of square deviations: 38067261945.93988
[2026-04-21 13:31:33] 2026-04-21 17:30:49,293 | INFO     | sum of deviations: 147230249740.31192
[2026-04-21 13:31:33] 2026-04-21 17:30:49,294 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,294 | INFO     | mean y: 2712066.334004024
[2026-04-21 13:31:33] 2026-04-21 17:30:49,294 | INFO     | intersect: 2712066.334004024
[2026-04-21 13:31:33] 2026-04-21 17:30:49,295 | INFO     | chi2: 1.540240294202786
[2026-04-21 13:31:33] 2026-04-21 17:30:49,295 | INFO     | current chi2=1.540240294202786 (change=31.43120095469691 %)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,296 | INFO     | sum of square deviations: 36929892240.91876
[2026-04-21 13:31:33] 2026-04-21 17:30:49,303 | INFO     | sum of deviations: 145254876855.04062
[2026-04-21 13:31:33] 2026-04-21 17:30:49,303 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,303 | INFO     | mean y: 2711801.4674796746
[2026-04-21 13:31:33] 2026-04-21 17:30:49,304 | INFO     | intersect: 2711801.4674796746
[2026-04-21 13:31:33] 2026-04-21 17:30:49,304 | INFO     | chi2: 1.540236631988539
[2026-04-21 13:31:33] 2026-04-21 17:30:49,305 | INFO     | current chi2=1.540236631988539 (change=0.00023776901959732296 %)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,305 | INFO     | right removable region: 491
[2026-04-21 13:31:33] 2026-04-21 17:30:49,305 | INFO     | sum of square deviations: 38067242425.939865
[2026-04-21 13:31:33] 2026-04-21 17:30:49,313 | INFO     | sum of deviations: 20800089602.780693
[2026-04-21 13:31:33] 2026-04-21 17:30:49,313 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,313 | INFO     | mean y: 2719941.100603622
[2026-04-21 13:31:33] 2026-04-21 17:30:49,313 | INFO     | intersect: 2719941.100603622
[2026-04-21 13:31:33] 2026-04-21 17:30:49,314 | INFO     | chi2: 0.7589617357329241
[2026-04-21 13:31:33] 2026-04-21 17:30:49,314 | INFO     | current chi2=0.7589617357329241 (change=66.2123533993887 %)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,315 | INFO     | sum of square deviations: 36929853200.91876
[2026-04-21 13:31:33] 2026-04-21 17:30:49,322 | INFO     | sum of deviations: 18572960859.812996
[2026-04-21 13:31:33] 2026-04-21 17:30:49,322 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,323 | INFO     | mean y: 2720231.349593496
[2026-04-21 13:31:33] 2026-04-21 17:30:49,323 | INFO     | intersect: 2720231.349593496
[2026-04-21 13:31:33] 2026-04-21 17:30:49,323 | INFO     | chi2: 0.7348774375191088
[2026-04-21 13:31:33] 2026-04-21 17:30:49,324 | INFO     | current chi2=0.7348774375191088 (change=3.1733218000189773 %)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,324 | INFO     | left removable region: 10
[2026-04-21 13:31:33] 2026-04-21 17:30:49,324 | INFO     | sum of square deviations: 34507864609.87099
[2026-04-21 13:31:33] 2026-04-21 17:30:49,331 | INFO     | sum of deviations: 50888953085.948006
[2026-04-21 13:31:33] 2026-04-21 17:30:49,332 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,332 | INFO     | mean y: 2724611.2203742205
[2026-04-21 13:31:33] 2026-04-21 17:30:49,332 | INFO     | intersect: 2724611.2203742205
[2026-04-21 13:31:33] 2026-04-21 17:30:49,333 | INFO     | chi2: 0.0213981561808565
[2026-04-21 13:31:33] 2026-04-21 17:30:49,333 | INFO     | current memory leak: 1.47 B/s (using 481 data points, chi2=0.02)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | ..............................
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | . Timing measurements:
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | . get job = 0 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | . initial setup = 6 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,334 | INFO     | . payload setup = 9 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,335 | INFO     | . stage-in = 0 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,335 | INFO     | . payload execution = 30585 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,335 | INFO     | . stage-out = 2 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,335 | INFO     | . log creation = 0 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,335 | INFO     | ..............................
[2026-04-21 13:31:33] 2026-04-21 17:30:49,839 | INFO     | 
[2026-04-21 13:31:33] 2026-04-21 17:30:49,839 | INFO     | job summary report
[2026-04-21 13:31:33] 2026-04-21 17:30:49,839 | INFO     | --------------------------------------------------
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | PanDA job id: 7105104260
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | task id: 49820375
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | errors: (none)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | pilot state: finished 
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | transexitcode: 0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | exeerrorcode: 0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | exeerrordiag: 
[2026-04-21 13:31:33] 2026-04-21 17:30:49,840 | INFO     | exitcode: 0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | exitmsg: OK
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | cpuconsumptiontime: 89714 s
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | nevents: 400
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | neventsw: 0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | pid: 624885
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | pgrp: 624885
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | corecount: 11
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | event service: False
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | sizes: {0: 2283392, 11: 2283392, 30598: 2321912, 30602: 2323988, 30604: 2324126}
[2026-04-21 13:31:33] 2026-04-21 17:30:49,841 | INFO     | --------------------------------------------------
[2026-04-21 13:31:33] 2026-04-21 17:30:49,842 | INFO     | 
[2026-04-21 13:31:33] 2026-04-21 17:30:49,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 13:31:33] 2026-04-21 17:30:49,908 | INFO     | job 7105104260 has completed (purged errors)
[2026-04-21 13:31:33] 2026-04-21 17:30:49,909 | INFO     | overall cleanup function is called
[2026-04-21 13:31:33] 2026-04-21 17:30:50,941 | INFO     | --- collectZombieJob: --- 10, [624885]
[2026-04-21 13:31:33] 2026-04-21 17:30:50,942 | INFO     | zombie collector waiting for pid 624885
[2026-04-21 13:31:33] 2026-04-21 17:30:50,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 13:31:33] 2026-04-21 17:30:50,942 | INFO     | collected zombie processes
[2026-04-21 13:31:33] 2026-04-21 17:30:50,942 | INFO     | will attempt to kill all subprocesses of pid=624885
[2026-04-21 13:31:33] 2026-04-21 17:30:51,298 | INFO     | process IDs to be killed: [624885] (in reverse order)
[2026-04-21 13:31:33] 2026-04-21 17:30:51,401 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 13:31:33] 2026-04-21 17:30:51,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 13:31:33] 2026-04-21 17:30:51,415 | INFO     | did not find any defunct processes belonging to 624885
[2026-04-21 13:31:33] 2026-04-21 17:30:51,426 | INFO     | did not find any defunct processes belonging to 624885
[2026-04-21 13:31:33] 2026-04-21 17:30:51,426 | INFO     | Ready for new job
[2026-04-21 13:31:33] 2026-04-21 17:30:51,429 | INFO     | **************************************
[2026-04-21 13:31:33] 2026-04-21 17:30:51,429 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 13:31:33] 2026-04-21 17:30:51,429 | INFO     | **************************************
[2026-04-21 13:31:33] 2026-04-21 17:30:51,429 | INFO     | 
[2026-04-21 13:31:33] 2026-04-21 17:30:51,432 | INFO     | architecture information:
[2026-04-21 13:31:33] 2026-04-21 17:30:51,432 | INFO     | executing command: cat /etc/os-release
[2026-04-21 13:31:33] 2026-04-21 17:30:51,451 | INFO     | cat /etc/os-release:
[2026-04-21 13:31:33] NAME="CentOS Linux"
[2026-04-21 13:31:33] VERSION="7 (Core)"
[2026-04-21 13:31:33] ID="centos"
[2026-04-21 13:31:33] ID_LIKE="rhel fedora"
[2026-04-21 13:31:33] VERSION_ID="7"
[2026-04-21 13:31:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 13:31:33] ANSI_COLOR="0;31"
[2026-04-21 13:31:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 13:31:33] HOME_URL="https://www.centos.org/"
[2026-04-21 13:31:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 13:31:33] 
[2026-04-21 13:31:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 13:31:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 13:31:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 13:31:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 13:31:33] 
[2026-04-21 13:31:33] 2026-04-21 17:30:51,452 | INFO     | **************************************
[2026-04-21 13:31:33] 2026-04-21 17:30:51,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 13:31:33] 2026-04-21 17:30:52,073 | INFO     | sufficient remaining disk space (60744007680 B)
[2026-04-21 13:31:33] 2026-04-21 17:30:52,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 13:31:33] 2026-04-21 17:30:52,074 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 13:31:33] 2026-04-21 17:30:52,074 | INFO     | update_server=False
[2026-04-21 13:31:33] 2026-04-21 17:30:52,074 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 13:31:33] 2026-04-21 17:30:52,148 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 13:31:33] 2026-04-21 17:30:52,148 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 13:31:33] 2026-04-21 17:30:52,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:31:33] 2026-04-21 17:30:52,149 | INFO     | will abort loop
[2026-04-21 13:31:33] 2026-04-21 17:30:52,358 | INFO     | all payload control threads have been joined
[2026-04-21 13:31:33] 2026-04-21 17:30:52,937 | INFO     | all data control threads have been joined
[2026-04-21 13:31:33] 2026-04-21 17:30:52,966 | INFO     | all job control threads have been joined
[2026-04-21 13:31:33] 2026-04-21 17:30:53,081 | INFO     | [job] retrieve thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,128 | INFO     | [data] copytool_in thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 13:31:33] 2026-04-21 17:30:53,154 | INFO     | [job] job monitor thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,364 | INFO     | [payload] control thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,443 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 13:31:33] 2026-04-21 17:30:53,809 | INFO     | [payload] failed_post thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,942 | INFO     | [data] control thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:53,971 | INFO     | [job] control thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:54,141 | INFO     | [payload] validate_post thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:54,243 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:54,243 | INFO     | [job] validate thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:54,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:31:33] 2026-04-21 17:30:54,494 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:54,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:55,149 | INFO     | [data] copytool_out thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:55,463 | INFO     | [job] queue monitor thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:30:57,762 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 13:31:33] 2026-04-21 17:31:23,055 | INFO     | PID=613639 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 13:31:33] 2026-04-21 17:31:23,055 | INFO     | .. there are 20 such processes running
[2026-04-21 13:31:33] 2026-04-21 17:31:23,056 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 13:31:33] 2026-04-21 17:31:23,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 13:31:33] 2026-04-21 17:31:23,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 13:31:33] 2026-04-21 17:31:26,589 | INFO     | [monitor] cgroup control has ended
[2026-04-21 13:31:33] 2026-04-21 17:31:28,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850868270912)>', '<ExcThread(monitor, started 139850107844352)>']
[2026-04-21 13:31:33] 2026-04-21 17:31:29,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 13:31:33] 2026-04-21 17:31:29,087 | INFO     | [monitor] control thread has ended
[2026-04-21 13:31:33] 2026-04-21 17:31:33,306 | INFO     | all workflow threads have been joined
[2026-04-21 13:31:33] 2026-04-21 17:31:33,306 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 13:31:33] 2026-04-21 17:31:33,307 | INFO     | traces error code: 0
[2026-04-21 13:31:33] 2026-04-21 17:31:33,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 13:31:33] 2026-04-21 17:31:33,487 [wrapper] ==== pilot stdout END ====
[2026-04-21 13:31:33] 2026-04-21 17:31:33,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 13:31:33] 2026-04-21 17:31:33,498 [wrapper] pilotpid: 613639
[2026-04-21 13:31:33] 2026-04-21 17:31:33,502 [wrapper] Pilot exit status: 0
[2026-04-21 13:31:33] 2026-04-21 17:31:33,537 [wrapper] pandaids: 7105104260
[2026-04-21 13:31:33] 2026-04-21 17:31:33,620 [wrapper] cleanup supervisor_pilot 2830997 613640
[2026-04-21 13:31:33] 2026-04-21 17:31:33,625 [wrapper] Test setup, not cleaning
[2026-04-21 13:31:33] 2026-04-21 17:31:33,630 [wrapper] apfmon messages muted
[2026-04-21 13:31:33] 2026-04-21 17:31:33,634 [wrapper] ==== wrapper stdout END ====
[2026-04-21 13:31:33] 2026-04-21 17:31:33,643 [wrapper] ==== wrapper stderr END ====
[2026-04-21 13:31:33]  *** Error codes and diagnostics ***
[2026-04-21 13:31:33]     "exeErrorCode": 0,
[2026-04-21 13:31:33]     "pilotErrorCode": 0,
[2026-04-21 13:31:33]  *** Listing of results directory ***
[2026-04-21 13:31:33] total 2458336
[2026-04-21 13:31:33] -rwx------. 1 boincer umatlas      36322 Apr 21 03:43 runpilot2-wrapper.sh
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 04:49 queuedata.json
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 13:31:33] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:00 run_atlas
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:00 job.xml
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas 2233258122 Apr 21 05:00 EVNT.49820373._000018.pool.root.1
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:00 start_atlas.sh
[2026-04-21 13:31:33] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:00 shared
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas     656941 Apr 21 05:00 input.tar.gz
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:00 boinc_lockfile
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 05:00 pandaJob.out
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas         57 Apr 21 05:00 setup.sh.local
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas     995850 Apr 21 05:00 agis_schedconf.cvmfs.json
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas        438 Apr 21 05:00 workernode_map.json
[2026-04-21 13:31:33] drwx------. 5 boincer umatlas       4096 Apr 21 05:00 pilot3
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas  273106093 Apr 21 13:29 HITS.49820375._009831.pool.root.1
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas        489 Apr 21 13:29 boinc_task_state.xml
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas       6622 Apr 21 13:30 init_data.xml
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas       1055 Apr 21 13:30 memory_monitor_summary.json
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas    1509089 Apr 21 13:30 agis_ddmendpoints.agis.ALL.json
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas     763829 Apr 21 13:30 log.49820375._009831.job.log.tgz.1
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas       6426 Apr 21 13:30 heartbeat_new.json
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas       6317 Apr 21 13:30 heartbeat.json
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas         95 Apr 21 13:31 pilot_heartbeat.json
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 13:31 boinc_mmap_file
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas         28 Apr 21 13:31 wrapper_checkpoint.txt
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas       5004 Apr 21 13:31 pilotlog.txt
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas    2688062 Apr 21 13:31 log.49820375._009831.job.log.1
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas        357 Apr 21 13:31 output.list
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas        410 Apr 21 13:31 runtime_log
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas    3471360 Apr 21 13:31 result.tar.gz
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas       8951 Apr 21 13:31 runtime_log.err
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas        659 Apr 21 13:31 2aa4f476f5f1.diag
[2026-04-21 13:31:33] -rw-r--r--. 1 boincer umatlas      20998 Apr 21 13:31 stderr.txt
[2026-04-21 13:31:33] HITS file was successfully produced:
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas 273106093 Apr 21 13:29 shared/HITS.pool.root.1
[2026-04-21 13:31:33]  *** Contents of shared directory: ***
[2026-04-21 13:31:33] total 2451688
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas 2233258122 Apr 21 05:00 ATLAS.root_0
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:00 start_atlas.sh
[2026-04-21 13:31:33] -rw-r--r--. 2 boincer umatlas     656941 Apr 21 05:00 input.tar.gz
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas  273106093 Apr 21 13:29 HITS.pool.root.1
[2026-04-21 13:31:33] -rw-------. 1 boincer umatlas    3471360 Apr 21 13:31 result.tar.gz
13:31:56 (609798): run_atlas exited; CPU time 90959.293638
13:31:56 (609798): called boinc_finish(0)

</stderr_txt>
]]>

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