Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:04:09 (2449252): wrapper (7.7.26015): starting
05:04:09 (2449252): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 05:04:09] Arguments: --nthreads 8
[2026-04-21 05:04:09] Threads: 8
[2026-04-21 05:04:09] Checking for CVMFS
[2026-04-21 05:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 05:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 05:04:10] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 05:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 05:04:11] 2.13.3.0 8749 240082 731252 158683 3 686 14556201 21042176 16293 16776704 7 780564062 99.412 1202501039 31710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 05:04:11] CVMFS is ok
[2026-04-21 05:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 05:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 05:04:11] Further information can be found at the LHC@home message board.
[2026-04-21 05:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 05:04:11] Checking for apptainer binary...
[2026-04-21 05:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 05:04:11] Running /usr/bin/apptainer --version
[2026-04-21 05:04:11] apptainer version 1.4.5-2.el9
[2026-04-21 05:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 05:04:11] c-16-10.aglt2.org
[2026-04-21 05:04:11] apptainer works
[2026-04-21 05:04:12] Set ATHENA_PROC_NUMBER=8
[2026-04-21 05:04:12] Set ATHENA_CORE_NUMBER=8
[2026-04-21 05:04:12] Starting ATLAS job with PandaID=7104900050
[2026-04-21 05:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 15:40:14]  *** The last 200 lines of the pilot log: ***
[2026-04-21 15:40:14] 2026-04-21 19:39:01,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 15:40:14] 2026-04-21 19:39:02,900 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 15:40:14] 2026-04-21 19:39:04,459 | INFO     | monitor loop #2377: job 0:7104900050 is in state 'finished'
[2026-04-21 15:40:14] 2026-04-21 19:39:04,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,529 | INFO     | job 7104900050 has state=finished
[2026-04-21 15:40:14] 2026-04-21 19:39:04,530 | INFO     | preparing for final server update for job 7104900050 in state='finished'
[2026-04-21 15:40:14] 2026-04-21 19:39:04,534 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7104900050/jobReport.json
[2026-04-21 15:40:14] 2026-04-21 19:39:04,552 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-21 15:40:14] 2026-04-21 19:39:04,553 | INFO     | this job has now completed (state=finished)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,553 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,553 | INFO     | log transfer has been attempted: DONE
[2026-04-21 15:40:14] 2026-04-21 19:39:04,553 | INFO     | job 7104900050 has finished - writing final server update
[2026-04-21 15:40:14] 2026-04-21 19:39:04,577 | INFO     | total number of processed events: 400 (read)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,585 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7104900050/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,585 | INFO     | extracted standard info from prmon json
[2026-04-21 15:40:14] 2026-04-21 19:39:04,586 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 15:40:14] 2026-04-21 19:39:04,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 15:40:14] 2026-04-21 19:39:04,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 15:40:14] 2026-04-21 19:39:04,682 | INFO     | fitting pss+swap vs Time
[2026-04-21 15:40:14] 2026-04-21 19:39:04,683 | INFO     | sum of square deviations: 74259053949.15952
[2026-04-21 15:40:14] 2026-04-21 19:39:04,694 | INFO     | sum of deviations: 295074563186.42505
[2026-04-21 15:40:14] 2026-04-21 19:39:04,695 | INFO     | mean x (centered): 0.0
[2026-04-21 15:40:14] 2026-04-21 19:39:04,695 | INFO     | mean y: 2558242.5974235106
[2026-04-21 15:40:14] 2026-04-21 19:39:04,695 | INFO     | intersect: 2558242.5974235106
[2026-04-21 15:40:14] 2026-04-21 19:39:04,696 | INFO     | chi2: 4.198192431635124
[2026-04-21 15:40:14] 2026-04-21 19:39:04,697 | INFO     | sum of square deviations: 72479796493.80377
[2026-04-21 15:40:14] 2026-04-21 19:39:04,758 | INFO     | sum of deviations: 331802665646.6785
[2026-04-21 15:40:14] 2026-04-21 19:39:04,758 | INFO     | mean x (centered): 0.0
[2026-04-21 15:40:14] 2026-04-21 19:39:04,758 | INFO     | mean y: 2561367.8928571427
[2026-04-21 15:40:14] 2026-04-21 19:39:04,758 | INFO     | intersect: 2561367.8928571427
[2026-04-21 15:40:14] 2026-04-21 19:39:04,759 | INFO     | chi2: 3.5133354640082133
[2026-04-21 15:40:14] 2026-04-21 19:39:04,760 | INFO     | current chi2=3.5133354640082133 (change=16.313139018264835 %)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,760 | INFO     | right removable region: 615
[2026-04-21 15:40:14] 2026-04-21 19:39:04,761 | INFO     | sum of square deviations: 72479733724.33765
[2026-04-21 15:40:14] 2026-04-21 19:39:04,808 | INFO     | sum of deviations: 110828351502.7012
[2026-04-21 15:40:14] 2026-04-21 19:39:04,808 | INFO     | mean x (centered): 0.0
[2026-04-21 15:40:14] 2026-04-21 19:39:04,808 | INFO     | mean y: 2574014.7548701297
[2026-04-21 15:40:14] 2026-04-21 19:39:04,808 | INFO     | intersect: 2574014.7548701297
[2026-04-21 15:40:14] 2026-04-21 19:39:04,810 | INFO     | chi2: 1.0466228445881753
[2026-04-21 15:40:14] 2026-04-21 19:39:04,810 | INFO     | current chi2=1.0466228445881753 (change=75.06967911472 %)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,811 | INFO     | sum of square deviations: 70729065321.51546
[2026-04-21 15:40:14] 2026-04-21 19:39:04,824 | INFO     | sum of deviations: 60900717691.544945
[2026-04-21 15:40:14] 2026-04-21 19:39:04,825 | INFO     | mean x (centered): 0.0
[2026-04-21 15:40:14] 2026-04-21 19:39:04,825 | INFO     | mean y: 2578359.8248772505
[2026-04-21 15:40:14] 2026-04-21 19:39:04,825 | INFO     | intersect: 2578359.8248772505
[2026-04-21 15:40:14] 2026-04-21 19:39:04,826 | INFO     | chi2: 0.8368574673798228
[2026-04-21 15:40:14] 2026-04-21 19:39:04,826 | INFO     | current chi2=0.8368574673798228 (change=20.042117205161038 %)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,826 | INFO     | left removable region: 10
[2026-04-21 15:40:14] 2026-04-21 19:39:04,827 | INFO     | sum of square deviations: 68665830479.08476
[2026-04-21 15:40:14] 2026-04-21 19:39:04,838 | INFO     | sum of deviations: 98457446941.23137
[2026-04-21 15:40:14] 2026-04-21 19:39:04,839 | INFO     | mean x (centered): 0.0
[2026-04-21 15:40:14] 2026-04-21 19:39:04,839 | INFO     | mean y: 2581661.661157025
[2026-04-21 15:40:14] 2026-04-21 19:39:04,839 | INFO     | intersect: 2581661.661157025
[2026-04-21 15:40:14] 2026-04-21 19:39:04,840 | INFO     | chi2: 0.13925900350467446
[2026-04-21 15:40:14] 2026-04-21 19:39:04,840 | INFO     | current memory leak: 1.43 B/s (using 605 data points, chi2=0.14)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,841 | INFO     | could have reported an average CPU frequency of 2899 MHz (25 samples)
[2026-04-21 15:40:14] 2026-04-21 19:39:04,841 | INFO     | ..............................
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . Timing measurements:
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . get job = 0 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . initial setup = 36 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . payload setup = 75 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . stage-in = 0 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . payload execution = 37887 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,842 | INFO     | . stage-out = 6 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,843 | INFO     | . log creation = 0 s
[2026-04-21 15:40:14] 2026-04-21 19:39:04,843 | INFO     | ..............................
[2026-04-21 15:40:14] 2026-04-21 19:39:05,447 | INFO     | 
[2026-04-21 15:40:14] 2026-04-21 19:39:05,447 | INFO     | job summary report
[2026-04-21 15:40:14] 2026-04-21 19:39:05,447 | INFO     | --------------------------------------------------
[2026-04-21 15:40:14] 2026-04-21 19:39:05,447 | INFO     | PanDA job id: 7104900050
[2026-04-21 15:40:14] 2026-04-21 19:39:05,447 | INFO     | task id: 49820244
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | errors: (none)
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | pilot state: finished 
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | transexitcode: 0
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | exeerrorcode: 0
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | exeerrordiag: 
[2026-04-21 15:40:14] 2026-04-21 19:39:05,448 | INFO     | exitcode: 0
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | exitmsg: OK
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | cpuconsumptiontime: 136738 s
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | nevents: 400
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | neventsw: 0
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | pid: 2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | pgrp: 2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:05,449 | INFO     | corecount: 8
[2026-04-21 15:40:14] 2026-04-21 19:39:05,450 | INFO     | event service: False
[2026-04-21 15:40:14] 2026-04-21 19:39:05,450 | INFO     | sizes: {0: 2281500, 2: 2281556, 4: 2242561, 5: 2283441, 6: 2283469, 37967: 2325451, 37968: 2325578, 37975: 2327654, 37979: 2327710, 37980: 2327968}
[2026-04-21 15:40:14] 2026-04-21 19:39:05,450 | INFO     | --------------------------------------------------
[2026-04-21 15:40:14] 2026-04-21 19:39:05,450 | INFO     | 
[2026-04-21 15:40:14] 2026-04-21 19:39:05,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-21 15:40:14] 2026-04-21 19:39:05,678 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,678 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,678 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 15:40:14] 2026-04-21 19:39:05,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 15:40:14] 2026-04-21 19:39:05,682 | INFO     | job 7104900050 has completed (purged errors)
[2026-04-21 15:40:14] 2026-04-21 19:39:05,682 | INFO     | overall cleanup function is called
[2026-04-21 15:40:14] 2026-04-21 19:39:06,693 | INFO     | --- collectZombieJob: --- 10, [2464814]
[2026-04-21 15:40:14] 2026-04-21 19:39:06,693 | INFO     | zombie collector waiting for pid 2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:06,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 15:40:14] 2026-04-21 19:39:06,693 | INFO     | collected zombie processes
[2026-04-21 15:40:14] 2026-04-21 19:39:06,693 | INFO     | will attempt to kill all subprocesses of pid=2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:09,263 | INFO     | process IDs to be killed: [2464814] (in reverse order)
[2026-04-21 15:40:14] 2026-04-21 19:39:09,402 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 15:40:14] 2026-04-21 19:39:09,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 15:40:14] 2026-04-21 19:39:09,450 | INFO     | did not find any defunct processes belonging to 2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:09,546 | INFO     | did not find any defunct processes belonging to 2464814
[2026-04-21 15:40:14] 2026-04-21 19:39:09,572 | INFO     | Ready for new job
[2026-04-21 15:40:14] 2026-04-21 19:39:09,600 | INFO     | **************************************
[2026-04-21 15:40:14] 2026-04-21 19:39:09,601 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 15:40:14] 2026-04-21 19:39:09,601 | INFO     | **************************************
[2026-04-21 15:40:14] 2026-04-21 19:39:09,601 | INFO     | 
[2026-04-21 15:40:14] 2026-04-21 19:39:09,640 | INFO     | architecture information:
[2026-04-21 15:40:14] 2026-04-21 19:39:09,657 | INFO     | executing command: cat /etc/os-release
[2026-04-21 15:40:14] 2026-04-21 19:39:09,708 | INFO     | cat /etc/os-release:
[2026-04-21 15:40:14] NAME="CentOS Linux"
[2026-04-21 15:40:14] VERSION="7 (Core)"
[2026-04-21 15:40:14] ID="centos"
[2026-04-21 15:40:14] ID_LIKE="rhel fedora"
[2026-04-21 15:40:14] VERSION_ID="7"
[2026-04-21 15:40:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 15:40:14] ANSI_COLOR="0;31"
[2026-04-21 15:40:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 15:40:14] HOME_URL="https://www.centos.org/"
[2026-04-21 15:40:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 15:40:14] 
[2026-04-21 15:40:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 15:40:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 15:40:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 15:40:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 15:40:14] 
[2026-04-21 15:40:14] 2026-04-21 19:39:09,709 | INFO     | **************************************
[2026-04-21 15:40:14] 2026-04-21 19:39:10,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-21 15:40:14] 2026-04-21 19:39:10,430 | INFO     | sufficient remaining disk space (42733666304 B)
[2026-04-21 15:40:14] 2026-04-21 19:39:10,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 15:40:14] 2026-04-21 19:39:10,431 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 15:40:14] 2026-04-21 19:39:10,431 | INFO     | update_server=False
[2026-04-21 15:40:14] 2026-04-21 19:39:10,431 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 15:40:14] 2026-04-21 19:39:10,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 15:40:14] 2026-04-21 19:39:10,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 15:40:14] 2026-04-21 19:39:10,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 15:40:14] 2026-04-21 19:39:10,528 | INFO     | aborting loop
[2026-04-21 15:40:14] 2026-04-21 19:39:10,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 15:40:14] 2026-04-21 19:39:10,825 | INFO     | all payload control threads have been joined
[2026-04-21 15:40:14] 2026-04-21 19:39:10,883 | INFO     | all data control threads have been joined
[2026-04-21 15:40:14] 2026-04-21 19:39:11,358 | INFO     | all job control threads have been joined
[2026-04-21 15:40:14] 2026-04-21 19:39:11,437 | INFO     | [job] retrieve thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,463 | INFO     | [job] queue monitor thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,533 | INFO     | [job] job monitor thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,830 | INFO     | [payload] control thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,891 | INFO     | [data] control thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,973 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:11,973 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,365 | INFO     | [job] control thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,567 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,572 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,641 | INFO     | [data] copytool_in thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,642 | INFO     | [job] validate thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,783 | INFO     | [data] copytool_out thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,966 | INFO     | [payload] failed_post thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:12,966 | INFO     | [payload] validate_post thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:14,443 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 15:40:14] 2026-04-21 19:39:38,350 | INFO     | PID=2454671 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 15:40:14] 2026-04-21 19:39:38,351 | INFO     | .. there are 14 such processes running
[2026-04-21 15:40:14] 2026-04-21 19:39:38,351 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 15:40:14] 2026-04-21 19:39:38,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 15:40:14] 2026-04-21 19:39:38,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 15:40:14] 2026-04-21 19:40:06,272 | INFO     | [monitor] cgroup control has ended
[2026-04-21 15:40:14] 2026-04-21 19:40:07,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799871993664)>', '<ExcThread(monitor, started 139799590876928)>']
[2026-04-21 15:40:14] 2026-04-21 19:40:08,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 15:40:14] 2026-04-21 19:40:08,536 | INFO     | [monitor] control thread has ended
[2026-04-21 15:40:14] 2026-04-21 19:40:12,960 | INFO     | all workflow threads have been joined
[2026-04-21 15:40:14] 2026-04-21 19:40:12,960 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 15:40:14] 2026-04-21 19:40:12,960 | INFO     | traces error code: 0
[2026-04-21 15:40:14] 2026-04-21 19:40:12,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 15:40:14] 2026-04-21 19:40:13,203 [wrapper] ==== pilot stdout END ====
[2026-04-21 15:40:14] 2026-04-21 19:40:13,254 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 15:40:14] 2026-04-21 19:40:13,286 [wrapper] pilotpid: 2454671
[2026-04-21 15:40:14] 2026-04-21 19:40:13,305 [wrapper] Pilot exit status: 0
[2026-04-21 15:40:14] 2026-04-21 19:40:13,384 [wrapper] pandaids: 7104900050
[2026-04-21 15:40:14] 2026-04-21 19:40:13,562 [wrapper] cleanup supervisor_pilot  425938 2454672
[2026-04-21 15:40:14] 2026-04-21 19:40:13,576 [wrapper] Test setup, not cleaning
[2026-04-21 15:40:14] 2026-04-21 19:40:13,596 [wrapper] apfmon messages muted
[2026-04-21 15:40:14] 2026-04-21 19:40:13,605 [wrapper] ==== wrapper stdout END ====
[2026-04-21 15:40:14] 2026-04-21 19:40:13,628 [wrapper] ==== wrapper stderr END ====
[2026-04-21 15:40:14]  *** Error codes and diagnostics ***
[2026-04-21 15:40:14]     "exeErrorCode": 0,
[2026-04-21 15:40:14]     "pilotErrorCode": 0,
[2026-04-21 15:40:14]  *** Listing of results directory ***
[2026-04-21 15:40:14] total 2485224
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 03:41 pilot3.tar.gz
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 03:41 queuedata.json
[2026-04-21 15:40:14] -rwx------. 1 boincer umatlas      36322 Apr 21 03:41 runpilot2-wrapper.sh
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas     656911 Apr 21 03:52 2a2d96c2dda1_input.tar.gz
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas        100 Apr 21 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 15:40:14] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 05:03 run_atlas
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas        105 Apr 21 05:03 job.xml
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas 2259978159 Apr 21 05:04 EVNT.49820242._000020.pool.root.1
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:04 start_atlas.sh
[2026-04-21 15:40:14] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 05:04 shared
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas     657951 Apr 21 05:04 input.tar.gz
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas          0 Apr 21 05:04 boinc_lockfile
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 05:04 pandaJob.out
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas         57 Apr 21 05:04 setup.sh.local
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas     995850 Apr 21 05:05 agis_schedconf.cvmfs.json
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas        432 Apr 21 05:05 workernode_map.json
[2026-04-21 15:40:14] drwx------. 5 boincer umatlas       4096 Apr 21 05:05 pilot3
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas       6439 Apr 21 15:36 init_data.xml
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas  272437512 Apr 21 15:37 HITS.49820244._012231.pool.root.1
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas        491 Apr 21 15:37 boinc_task_state.xml
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas       1042 Apr 21 15:38 memory_monitor_summary.json
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas    1509089 Apr 21 15:38 agis_ddmendpoints.agis.ALL.json
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas     735167 Apr 21 15:38 log.49820244._012231.job.log.tgz.1
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas         95 Apr 21 15:39 pilot_heartbeat.json
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas       6398 Apr 21 15:39 heartbeat_new.json
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas       6289 Apr 21 15:39 heartbeat.json
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas         29 Apr 21 15:40 wrapper_checkpoint.txt
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 15:40 boinc_mmap_file
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas       4819 Apr 21 15:40 pilotlog.txt
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas    3133008 Apr 21 15:40 log.49820244._012231.job.log.1
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas        357 Apr 21 15:40 output.list
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas        479 Apr 21 15:40 runtime_log
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas    3880960 Apr 21 15:40 result.tar.gz
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas       8959 Apr 21 15:40 runtime_log.err
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas        658 Apr 21 15:40 2a2d96c2dda1.diag
[2026-04-21 15:40:14] -rw-r--r--. 1 boincer umatlas      21325 Apr 21 15:40 stderr.txt
[2026-04-21 15:40:14] HITS file was successfully produced:
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas 272437512 Apr 21 15:37 shared/HITS.pool.root.1
[2026-04-21 15:40:14]  *** Contents of shared directory: ***
[2026-04-21 15:40:14] total 2477528
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas 2259978159 Apr 21 05:04 ATLAS.root_0
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 05:04 start_atlas.sh
[2026-04-21 15:40:14] -rw-r--r--. 2 boincer umatlas     657951 Apr 21 05:04 input.tar.gz
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas  272437512 Apr 21 15:37 HITS.pool.root.1
[2026-04-21 15:40:14] -rw-------. 1 boincer umatlas    3880960 Apr 21 15:40 result.tar.gz
15:40:36 (2449252): run_atlas exited; CPU time 138586.198885
15:40:36 (2449252): called boinc_finish(0)

</stderr_txt>
]]>

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