Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:48:31 (1216): wrapper (7.7.26015): starting
15:48:31 (1216): wrapper: running run_atlas (--nthreads 8)
[2026-04-20 15:48:31] Arguments: --nthreads 8
[2026-04-20 15:48:31] Threads: 8
[2026-04-20 15:48:31] Checking for CVMFS
[2026-04-20 15:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 15:48:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 15:48:32] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 15:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 15:48:32] 2.11.2.0 10816 326895 136172 158663 2 1 12892077 18432001 1 130560 0 196846556 99.983 11967207 25416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-20 15:48:32] CVMFS is ok
[2026-04-20 15:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 15:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 15:48:32] Further information can be found at the LHC@home message board.
[2026-04-20 15:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 15:48:32] Checking for apptainer binary...
[2026-04-20 15:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 15:48:32] Running /usr/bin/apptainer --version
[2026-04-20 15:48:32] apptainer version 1.3.2-1.el7
[2026-04-20 15:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 15:48:34] c-206-11.aglt2.org
[2026-04-20 15:48:34] apptainer works
[2026-04-20 15:48:34] Set ATHENA_PROC_NUMBER=8
[2026-04-20 15:48:34] Set ATHENA_CORE_NUMBER=8
[2026-04-20 15:48:34] Starting ATLAS job with PandaID=7101016956
[2026-04-20 15:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 18:56:18]  *** The last 200 lines of the pilot log: ***
[2026-04-20 18:56:18] 2026-04-20 22:55:25,380 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7101016956/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,381 | INFO     | extracted standard info from prmon json
[2026-04-20 18:56:18] 2026-04-20 22:55:25,381 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 18:56:18] 2026-04-20 22:55:25,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 18:56:18] 2026-04-20 22:55:25,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 18:56:18] 2026-04-20 22:55:25,384 | INFO     | fitting pss+swap vs Time
[2026-04-20 18:56:18] 2026-04-20 22:55:25,384 | INFO     | sum of square deviations: 1900284932.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,385 | INFO     | sum of deviations: 12945170753.999998
[2026-04-20 18:56:18] 2026-04-20 22:55:25,386 | INFO     | mean x (centered): 0.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,386 | INFO     | mean y: 2552899.316939891
[2026-04-20 18:56:18] 2026-04-20 22:55:25,386 | INFO     | intersect: 2552899.316939891
[2026-04-20 18:56:18] 2026-04-20 22:55:25,386 | INFO     | chi2: 1.5672709302473236
[2026-04-20 18:56:18] 2026-04-20 22:55:25,386 | INFO     | sum of square deviations: 1748737904.5
[2026-04-20 18:56:18] 2026-04-20 22:55:25,387 | INFO     | sum of deviations: 12492476944.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,387 | INFO     | mean x (centered): 0.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,388 | INFO     | mean y: 2552445.4719101125
[2026-04-20 18:56:18] 2026-04-20 22:55:25,388 | INFO     | intersect: 2552445.4719101125
[2026-04-20 18:56:18] 2026-04-20 22:55:25,388 | INFO     | chi2: 1.56828783935978
[2026-04-20 18:56:18] 2026-04-20 22:55:25,388 | INFO     | current chi2=1.56828783935978 (change=-0.06488406648975864 %)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,388 | INFO     | right removable region: 177
[2026-04-20 18:56:18] 2026-04-20 22:55:25,389 | INFO     | sum of square deviations: 1748737904.5
[2026-04-20 18:56:18] 2026-04-20 22:55:25,389 | INFO     | sum of deviations: -14933740131.999998
[2026-04-20 18:56:18] 2026-04-20 22:55:25,390 | INFO     | mean x (centered): 0.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,390 | INFO     | mean y: 2580596.011235955
[2026-04-20 18:56:18] 2026-04-20 22:55:25,390 | INFO     | intersect: 2580596.011235955
[2026-04-20 18:56:18] 2026-04-20 22:55:25,390 | INFO     | chi2: 0.1257116327175052
[2026-04-20 18:56:18] 2026-04-20 22:55:25,390 | INFO     | current chi2=0.1257116327175052 (change=91.97894695222432 %)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,391 | INFO     | sum of square deviations: 1605470102.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,391 | INFO     | sum of deviations: -15783999124.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,391 | INFO     | mean x (centered): 0.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,392 | INFO     | mean y: 2581442.2716763006
[2026-04-20 18:56:18] 2026-04-20 22:55:25,392 | INFO     | intersect: 2581442.2716763006
[2026-04-20 18:56:18] 2026-04-20 22:55:25,392 | INFO     | chi2: 0.10501781881819412
[2026-04-20 18:56:18] 2026-04-20 22:55:25,392 | INFO     | current chi2=0.10501781881819412 (change=16.46133571887775 %)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,392 | INFO     | left removable region: 10
[2026-04-20 18:56:18] 2026-04-20 22:55:25,393 | INFO     | sum of square deviations: 1444149868.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,393 | INFO     | sum of deviations: -15363313600.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,394 | INFO     | mean x (centered): 0.0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,394 | INFO     | mean y: 2581922.748502994
[2026-04-20 18:56:18] 2026-04-20 22:55:25,394 | INFO     | intersect: 2581922.748502994
[2026-04-20 18:56:18] 2026-04-20 22:55:25,394 | INFO     | chi2: 0.10348791833144802
[2026-04-20 18:56:18] 2026-04-20 22:55:25,394 | INFO     | current memory leak: -10.64 B/s (using 167 data points, chi2=0.10)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | could have reported an average CPU frequency of 1695 MHz (10 samples)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | ..............................
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . Timing measurements:
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . get job = 0 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . initial setup = 7 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . payload setup = 14 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . stage-in = 0 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . payload execution = 11155 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,395 | INFO     | . stage-out = 2 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,396 | INFO     | . log creation = 0 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,396 | INFO     | ..............................
[2026-04-20 18:56:18] 2026-04-20 22:55:25,474 | INFO     | 
[2026-04-20 18:56:18] 2026-04-20 22:55:25,474 | INFO     | job summary report
[2026-04-20 18:56:18] 2026-04-20 22:55:25,474 | INFO     | --------------------------------------------------
[2026-04-20 18:56:18] 2026-04-20 22:55:25,474 | INFO     | PanDA job id: 7101016956
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | task id: 49820375
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | errors: (none)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | pilot state: finished 
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | transexitcode: 0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | exeerrorcode: 0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,475 | INFO     | exeerrordiag: 
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | exitcode: 0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | exitmsg: OK
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | cpuconsumptiontime: 84534 s
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | nevents: 400
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | neventsw: 0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,476 | INFO     | pid: 9925
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | pgrp: 9925
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | corecount: 8
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | event service: False
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | sizes: {0: 2281638, 1: 2283467, 12: 2283467, 11172: 2312854, 11173: 2312853, 11176: 2322091, 11177: 2322229}
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | --------------------------------------------------
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | 
[2026-04-20 18:56:18] 2026-04-20 22:55:25,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,502 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,502 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,502 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,502 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,505 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 18:56:18] 2026-04-20 22:55:25,505 | INFO     | job 7101016956 has completed (purged errors)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,505 | INFO     | overall cleanup function is called
[2026-04-20 18:56:18] 2026-04-20 22:55:25,818 | WARNING  | process 9925 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 18:56:18] 2026-04-20 22:55:25,900 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,900 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,901 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-20 18:56:18] 2026-04-20 22:55:25,901 | WARNING  | maxPSS not found in memory monitor output
[2026-04-20 18:56:18] 2026-04-20 22:55:25,902 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7101016956/payload.stdout) since it has not been created yet
[2026-04-20 18:56:18] 2026-04-20 22:55:25,902 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 18:56:18] 2026-04-20 22:55:25,920 | INFO     | sufficient remaining disk space (25173164032 B)
[2026-04-20 18:56:18] 2026-04-20 22:55:25,920 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-20 18:56:18] 2026-04-20 22:55:25,920 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7101016956/HITS.49820375._001478.pool.root.1 since it does not exist
[2026-04-20 18:56:18] 2026-04-20 22:55:26,017 | INFO     | number of running child processes to parent process 9925: 1
[2026-04-20 18:56:18] 2026-04-20 22:55:26,017 | INFO     | maximum number of monitored processes: 6
[2026-04-20 18:56:18] 2026-04-20 22:55:26,017 | INFO     | aborting job monitoring since job object (job id=7101016956) has expired
[2026-04-20 18:56:18] 2026-04-20 22:55:26,515 | INFO     | --- collectZombieJob: --- 10, [9925]
[2026-04-20 18:56:18] 2026-04-20 22:55:26,515 | INFO     | zombie collector waiting for pid 9925
[2026-04-20 18:56:18] 2026-04-20 22:55:26,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 18:56:18] 2026-04-20 22:55:26,515 | INFO     | collected zombie processes
[2026-04-20 18:56:18] 2026-04-20 22:55:26,515 | INFO     | will attempt to kill all subprocesses of pid=9925
[2026-04-20 18:56:18] 2026-04-20 22:55:26,612 | INFO     | process IDs to be killed: [9925] (in reverse order)
[2026-04-20 18:56:18] 2026-04-20 22:55:26,665 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 18:56:18] 2026-04-20 22:55:26,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 18:56:18] 2026-04-20 22:55:26,669 | INFO     | did not find any defunct processes belonging to 9925
[2026-04-20 18:56:18] 2026-04-20 22:55:26,672 | INFO     | did not find any defunct processes belonging to 9925
[2026-04-20 18:56:18] 2026-04-20 22:55:26,673 | INFO     | Ready for new job
[2026-04-20 18:56:18] 2026-04-20 22:55:26,674 | INFO     | **************************************
[2026-04-20 18:56:18] 2026-04-20 22:55:26,674 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 18:56:18] 2026-04-20 22:55:26,674 | INFO     | **************************************
[2026-04-20 18:56:18] 2026-04-20 22:55:26,674 | INFO     | 
[2026-04-20 18:56:18] 2026-04-20 22:55:26,675 | INFO     | architecture information:
[2026-04-20 18:56:18] 2026-04-20 22:55:26,676 | INFO     | executing command: cat /etc/os-release
[2026-04-20 18:56:18] 2026-04-20 22:55:26,691 | INFO     | cat /etc/os-release:
[2026-04-20 18:56:18] NAME="CentOS Linux"
[2026-04-20 18:56:18] VERSION="7 (Core)"
[2026-04-20 18:56:18] ID="centos"
[2026-04-20 18:56:18] ID_LIKE="rhel fedora"
[2026-04-20 18:56:18] VERSION_ID="7"
[2026-04-20 18:56:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 18:56:18] ANSI_COLOR="0;31"
[2026-04-20 18:56:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 18:56:18] HOME_URL="https://www.centos.org/"
[2026-04-20 18:56:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 18:56:18] 
[2026-04-20 18:56:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 18:56:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 18:56:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 18:56:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 18:56:18] 
[2026-04-20 18:56:18] 2026-04-20 22:55:26,691 | INFO     | **************************************
[2026-04-20 18:56:18] 2026-04-20 22:55:27,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 18:56:18] 2026-04-20 22:55:27,210 | INFO     | sufficient remaining disk space (25174212608 B)
[2026-04-20 18:56:18] 2026-04-20 22:55:27,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 18:56:18] 2026-04-20 22:55:27,211 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 18:56:18] 2026-04-20 22:55:27,211 | INFO     | update_server=False
[2026-04-20 18:56:18] 2026-04-20 22:55:27,211 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 18:56:18] 2026-04-20 22:55:27,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 18:56:18] 2026-04-20 22:55:27,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 18:56:18] 2026-04-20 22:55:27,212 | INFO     | aborting loop
[2026-04-20 18:56:18] 2026-04-20 22:55:27,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 18:56:18] 2026-04-20 22:55:28,035 | INFO     | all job control threads have been joined
[2026-04-20 18:56:18] 2026-04-20 22:55:28,158 | INFO     | all data control threads have been joined
[2026-04-20 18:56:18] 2026-04-20 22:55:28,217 | INFO     | [job] retrieve thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:28,218 | INFO     | [job] queue monitor thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:28,218 | INFO     | [job] job monitor thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:28,242 | INFO     | [data] copytool_in thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:28,306 | INFO     | all payload control threads have been joined
[2026-04-20 18:56:18] 2026-04-20 22:55:28,407 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:28,589 | INFO     | [payload] failed_post thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,041 | INFO     | [job] control thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,113 | INFO     | [job] validate thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,141 | INFO     | [payload] validate_post thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,163 | INFO     | [data] control thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,312 | INFO     | [payload] control thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,396 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,574 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:29,606 | INFO     | [data] copytool_out thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:30,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 18:56:18] 2026-04-20 22:55:34,686 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:37,585 | INFO     | job.realtimelogging is not enabled
[2026-04-20 18:56:18] 2026-04-20 22:55:38,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 18:56:18] 2026-04-20 22:55:57,613 | INFO     | PID=5432 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-20 18:56:18] 2026-04-20 22:55:57,613 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 18:56:18] 2026-04-20 22:55:57,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 18:56:18] 2026-04-20 22:55:57,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 18:56:18] 2026-04-20 22:56:12,106 | INFO     | [monitor] cgroup control has ended
[2026-04-20 18:56:18] 2026-04-20 22:56:13,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104532174656)>', '<ExcThread(monitor, started 140103502522112)>']
[2026-04-20 18:56:18] 2026-04-20 22:56:13,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 18:56:18] 2026-04-20 22:56:13,695 | INFO     | [monitor] control thread has ended
[2026-04-20 18:56:18] 2026-04-20 22:56:18,653 | INFO     | all workflow threads have been joined
[2026-04-20 18:56:18] 2026-04-20 22:56:18,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 18:56:18] 2026-04-20 22:56:18,653 | INFO     | traces error code: 0
[2026-04-20 18:56:18] 2026-04-20 22:56:18,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 18:56:18] 2026-04-20 22:56:18,755 [wrapper] ==== pilot stdout END ====
[2026-04-20 18:56:18] 2026-04-20 22:56:18,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 18:56:18] 2026-04-20 22:56:18,763 [wrapper] pilotpid: 5432
[2026-04-20 18:56:18] 2026-04-20 22:56:18,767 [wrapper] Pilot exit status: 0
[2026-04-20 18:56:18] 2026-04-20 22:56:18,782 [wrapper] pandaids: 7101016956
[2026-04-20 18:56:18] 2026-04-20 22:56:18,826 [wrapper] cleanup supervisor_pilot 24461 5433
[2026-04-20 18:56:18] 2026-04-20 22:56:18,829 [wrapper] Test setup, not cleaning
[2026-04-20 18:56:18] 2026-04-20 22:56:18,832 [wrapper] apfmon messages muted
[2026-04-20 18:56:18] 2026-04-20 22:56:18,836 [wrapper] ==== wrapper stdout END ====
[2026-04-20 18:56:18] 2026-04-20 22:56:18,840 [wrapper] ==== wrapper stderr END ====
[2026-04-20 18:56:18]  *** Error codes and diagnostics ***
[2026-04-20 18:56:18]     "exeErrorCode": 0,
[2026-04-20 18:56:18]     "pilotErrorCode": 0,
[2026-04-20 18:56:18]  *** Listing of results directory ***
[2026-04-20 18:56:18] total 2450912
[2026-04-20 18:56:18] -rwx------ 1 boincer umatlas      36322 Apr 18 08:55 runpilot2-wrapper.sh
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas     644190 Apr 18 09:28 pilot3.tar.gz
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas       5094 Apr 18 09:30 queuedata.json
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas        100 Apr 20 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 18:56:18] -rwxr-xr-x 1 boincer umatlas       7986 Apr 20 15:48 run_atlas
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas        105 Apr 20 15:48 job.xml
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas 2229227461 Apr 20 15:48 EVNT.49820373._000011.pool.root.1
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas     656922 Apr 20 15:48 input.tar.gz
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas      15665 Apr 20 15:48 start_atlas.sh
[2026-04-20 18:56:18] drwxrwx--x 2 boincer umatlas       4096 Apr 20 15:48 shared
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas          0 Apr 20 15:48 boinc_lockfile
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas       2584 Apr 20 15:48 pandaJob.out
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas         57 Apr 20 15:48 setup.sh.local
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas     997849 Apr 20 15:48 agis_schedconf.cvmfs.json
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas        445 Apr 20 15:48 workernode_map.json
[2026-04-20 18:56:18] drwx------ 5 boincer umatlas       4096 Apr 20 15:48 pilot3
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas  273509125 Apr 20 18:54 HITS.49820375._001478.pool.root.1
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas        489 Apr 20 18:55 boinc_task_state.xml
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas         95 Apr 20 18:55 pilot_heartbeat.json
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas       1048 Apr 20 18:55 memory_monitor_summary.json
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas    1512404 Apr 20 18:55 agis_ddmendpoints.agis.ALL.json
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas     443596 Apr 20 18:55 log.49820375._001478.job.log.tgz.1
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas       6432 Apr 20 18:55 heartbeat_new.json
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas       6323 Apr 20 18:55 heartbeat.json
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas       5867 Apr 20 18:55 init_data.xml
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas       8192 Apr 20 18:56 boinc_mmap_file
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas         28 Apr 20 18:56 wrapper_checkpoint.txt
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas       4812 Apr 20 18:56 pilotlog.txt
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas    1023580 Apr 20 18:56 log.49820375._001478.job.log.1
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas        357 Apr 20 18:56 output.list
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas        410 Apr 20 18:56 runtime_log
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas    1484800 Apr 20 18:56 result.tar.gz
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas       8964 Apr 20 18:56 runtime_log.err
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas        663 Apr 20 18:56 7f3bc5e6d172.diag
[2026-04-20 18:56:18] -rw-r--r-- 1 boincer umatlas      21371 Apr 20 18:56 stderr.txt
[2026-04-20 18:56:18] HITS file was successfully produced:
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas 273509125 Apr 20 18:54 shared/HITS.pool.root.1
[2026-04-20 18:56:18]  *** Contents of shared directory: ***
[2026-04-20 18:56:18] total 2446200
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas 2229227461 Apr 20 15:48 ATLAS.root_0
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas     656922 Apr 20 15:48 input.tar.gz
[2026-04-20 18:56:18] -rw-r--r-- 2 boincer umatlas      15665 Apr 20 15:48 start_atlas.sh
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas  273509125 Apr 20 18:54 HITS.pool.root.1
[2026-04-20 18:56:18] -rw------- 1 boincer umatlas    1484800 Apr 20 18:56 result.tar.gz
18:56:20 (1216): run_atlas exited; CPU time 84230.753982
18:56:20 (1216): called boinc_finish(0)

</stderr_txt>
]]>

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