Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:52 (3941020): wrapper (7.7.26015): starting
10:01:52 (3941020): wrapper: running run_atlas (--nthreads 10)
[2026-04-20 10:01:52] Arguments: --nthreads 10
[2026-04-20 10:01:52] Threads: 10
[2026-04-20 10:01:52] Checking for CVMFS
[2026-04-20 10:01:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 10:01:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 10:01:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 10:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 10:01:55] 2.13.3.0 11842 50316 444672 158653 0 896 33078783 40960000 16677 16776704 0 56057163 99.448 89587470 11267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-20 10:01:55] CVMFS is ok
[2026-04-20 10:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 10:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 10:01:55] Further information can be found at the LHC@home message board.
[2026-04-20 10:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 10:01:55] Checking for apptainer binary...
[2026-04-20 10:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 10:01:55] Running /usr/bin/apptainer --version
[2026-04-20 10:01:55] apptainer version 1.4.5-3.el9
[2026-04-20 10:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 10:01:56] c7-10-13.aglt2.org
[2026-04-20 10:01:56] apptainer works
[2026-04-20 10:01:56] Set ATHENA_PROC_NUMBER=10
[2026-04-20 10:01:56] Set ATHENA_CORE_NUMBER=10
[2026-04-20 10:01:56] Starting ATLAS job with PandaID=7088335378
[2026-04-20 10:01:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 18:02:12]  *** The last 200 lines of the pilot log: ***
[2026-04-20 18:02:12] 2026-04-20 22:01:37,225 | INFO     | preparing for final server update for job 7088335378 in state='finished'
[2026-04-20 18:02:12] 2026-04-20 22:01:37,388 | INFO     | number of running child processes to parent process 3950665: 1
[2026-04-20 18:02:12] 2026-04-20 22:01:37,389 | INFO     | maximum number of monitored processes: 6
[2026-04-20 18:02:12] 2026-04-20 22:01:37,433 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,435 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7088335378/jobReport.json
[2026-04-20 18:02:12] 2026-04-20 22:01:37,442 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-20 18:02:12] 2026-04-20 22:01:37,443 | INFO     | this job has now completed (state=finished)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,443 | INFO     | log transfer has been attempted: DONE
[2026-04-20 18:02:12] 2026-04-20 22:01:37,444 | INFO     | job 7088335378 has finished - writing final server update
[2026-04-20 18:02:12] 2026-04-20 22:01:37,445 | INFO     | total number of processed events: 400 (read)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,490 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7088335378/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,492 | INFO     | extracted standard info from prmon json
[2026-04-20 18:02:12] 2026-04-20 22:01:37,493 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 18:02:12] 2026-04-20 22:01:37,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 18:02:12] 2026-04-20 22:01:37,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 18:02:12] 2026-04-20 22:01:37,525 | INFO     | fitting pss+swap vs Time
[2026-04-20 18:02:12] 2026-04-20 22:01:37,528 | INFO     | sum of square deviations: 31989048844.84846
[2026-04-20 18:02:12] 2026-04-20 22:01:37,553 | INFO     | sum of deviations: 51223395360.596924
[2026-04-20 18:02:12] 2026-04-20 22:01:37,553 | INFO     | mean x (centered): 0.0
[2026-04-20 18:02:12] 2026-04-20 22:01:37,553 | INFO     | mean y: 2602448.2985074627
[2026-04-20 18:02:12] 2026-04-20 22:01:37,554 | INFO     | intersect: 2602448.2985074627
[2026-04-20 18:02:12] 2026-04-20 22:01:37,556 | INFO     | chi2: 4.1108289070765425
[2026-04-20 18:02:12] 2026-04-20 22:01:37,558 | INFO     | sum of square deviations: 30977008511.5497
[2026-04-20 18:02:12] 2026-04-20 22:01:37,580 | INFO     | sum of deviations: 84142043455.5495
[2026-04-20 18:02:12] 2026-04-20 22:01:37,580 | INFO     | mean x (centered): 0.0
[2026-04-20 18:02:12] 2026-04-20 22:01:37,580 | INFO     | mean y: 2607363.7952586208
[2026-04-20 18:02:12] 2026-04-20 22:01:37,581 | INFO     | intersect: 2607363.7952586208
[2026-04-20 18:02:12] 2026-04-20 22:01:37,582 | INFO     | chi2: 3.278507428202363
[2026-04-20 18:02:12] 2026-04-20 22:01:37,583 | INFO     | current chi2=3.278507428202363 (change=20.247047437109057 %)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,583 | INFO     | right removable region: 463
[2026-04-20 18:02:12] 2026-04-20 22:01:37,585 | INFO     | sum of square deviations: 30976641901.54971
[2026-04-20 18:02:12] 2026-04-20 22:01:37,605 | INFO     | sum of deviations: -76728803502.41159
[2026-04-20 18:02:12] 2026-04-20 22:01:37,605 | INFO     | mean x (centered): 0.0
[2026-04-20 18:02:12] 2026-04-20 22:01:37,606 | INFO     | mean y: 2621691.7219827585
[2026-04-20 18:02:12] 2026-04-20 22:01:37,606 | INFO     | intersect: 2621691.7219827585
[2026-04-20 18:02:12] 2026-04-20 22:01:37,608 | INFO     | chi2: 1.4715588483743298
[2026-04-20 18:02:12] 2026-04-20 22:01:37,608 | INFO     | current chi2=1.4715588483743298 (change=64.20286804344664 %)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,610 | INFO     | sum of square deviations: 29985816758.0696
[2026-04-20 18:02:12] 2026-04-20 22:01:37,629 | INFO     | sum of deviations: -114907249283.57724
[2026-04-20 18:02:12] 2026-04-20 22:01:37,630 | INFO     | mean x (centered): 0.0
[2026-04-20 18:02:12] 2026-04-20 22:01:37,630 | INFO     | mean y: 2627564.250544662
[2026-04-20 18:02:12] 2026-04-20 22:01:37,631 | INFO     | intersect: 2627564.250544662
[2026-04-20 18:02:12] 2026-04-20 22:01:37,632 | INFO     | chi2: 1.2271549411756613
[2026-04-20 18:02:12] 2026-04-20 22:01:37,633 | INFO     | current chi2=1.2271549411756613 (change=16.60850379641073 %)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,633 | INFO     | left removable region: 10
[2026-04-20 18:02:12] 2026-04-20 22:01:37,634 | INFO     | sum of square deviations: 28825427045.646572
[2026-04-20 18:02:12] 2026-04-20 22:01:37,654 | INFO     | sum of deviations: -80908813236.03545
[2026-04-20 18:02:12] 2026-04-20 22:01:37,655 | INFO     | mean x (centered): 0.0
[2026-04-20 18:02:12] 2026-04-20 22:01:37,655 | INFO     | mean y: 2632867.4326710817
[2026-04-20 18:02:12] 2026-04-20 22:01:37,656 | INFO     | intersect: 2632867.4326710817
[2026-04-20 18:02:12] 2026-04-20 22:01:37,658 | INFO     | chi2: 0.3726967693229286
[2026-04-20 18:02:12] 2026-04-20 22:01:37,658 | INFO     | current memory leak: -2.81 B/s (using 453 data points, chi2=0.37)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,660 | INFO     | could have reported an average CPU frequency of 3293 MHz (19 samples)
[2026-04-20 18:02:12] 2026-04-20 22:01:37,661 | INFO     | ..............................
[2026-04-20 18:02:12] 2026-04-20 22:01:37,661 | INFO     | . Timing measurements:
[2026-04-20 18:02:12] 2026-04-20 22:01:37,662 | INFO     | . get job = 0 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,662 | INFO     | . initial setup = 24 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,662 | INFO     | . payload setup = 49 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,663 | INFO     | . stage-in = 0 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,663 | INFO     | . payload execution = 28627 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,663 | INFO     | . stage-out = 4 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,664 | INFO     | . log creation = 0 s
[2026-04-20 18:02:12] 2026-04-20 22:01:37,664 | INFO     | ..............................
[2026-04-20 18:02:12] 2026-04-20 22:01:38,452 | INFO     | 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,453 | INFO     | job summary report
[2026-04-20 18:02:12] 2026-04-20 22:01:38,453 | INFO     | --------------------------------------------------
[2026-04-20 18:02:12] 2026-04-20 22:01:38,453 | INFO     | PanDA job id: 7088335378
[2026-04-20 18:02:12] 2026-04-20 22:01:38,454 | INFO     | task id: 49263200
[2026-04-20 18:02:12] 2026-04-20 22:01:38,454 | INFO     | errors: (none)
[2026-04-20 18:02:12] 2026-04-20 22:01:38,454 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,454 | INFO     | pilot state: finished 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,454 | INFO     | transexitcode: 0
[2026-04-20 18:02:12] 2026-04-20 22:01:38,455 | INFO     | exeerrorcode: 0
[2026-04-20 18:02:12] 2026-04-20 22:01:38,455 | INFO     | exeerrordiag: 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,455 | INFO     | exitcode: 0
[2026-04-20 18:02:12] 2026-04-20 22:01:38,455 | INFO     | exitmsg: OK
[2026-04-20 18:02:12] 2026-04-20 22:01:38,455 | INFO     | cpuconsumptiontime: 98552 s
[2026-04-20 18:02:12] 2026-04-20 22:01:38,456 | INFO     | nevents: 400
[2026-04-20 18:02:12] 2026-04-20 22:01:38,456 | INFO     | neventsw: 0
[2026-04-20 18:02:12] 2026-04-20 22:01:38,456 | INFO     | pid: 3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:38,456 | INFO     | pgrp: 3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:38,457 | INFO     | corecount: 10
[2026-04-20 18:02:12] 2026-04-20 22:01:38,457 | INFO     | event service: False
[2026-04-20 18:02:12] 2026-04-20 22:01:38,457 | INFO     | sizes: {0: 2281583, 1: 2281667, 2: 2282068, 3: 2283496, 13: 2283524, 28681: 2321827, 28682: 2321954, 28687: 2331008, 28688: 2331258}
[2026-04-20 18:02:12] 2026-04-20 22:01:38,457 | INFO     | --------------------------------------------------
[2026-04-20 18:02:12] 2026-04-20 22:01:38,458 | INFO     | 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-20 18:02:12] 2026-04-20 22:01:38,511 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,515 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 18:02:12] 2026-04-20 22:01:38,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 18:02:12] 2026-04-20 22:01:38,516 | INFO     | job 7088335378 has completed (purged errors)
[2026-04-20 18:02:12] 2026-04-20 22:01:38,516 | INFO     | overall cleanup function is called
[2026-04-20 18:02:12] 2026-04-20 22:01:38,762 | INFO     | PID=3945867 has CPU usage=32.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-20 18:02:12] 2026-04-20 22:01:38,762 | INFO     | .. there are 16 such processes running
[2026-04-20 18:02:12] 2026-04-20 22:01:39,532 | INFO     | --- collectZombieJob: --- 10, [3950665]
[2026-04-20 18:02:12] 2026-04-20 22:01:39,533 | INFO     | zombie collector waiting for pid 3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:39,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 18:02:12] 2026-04-20 22:01:39,534 | INFO     | collected zombie processes
[2026-04-20 18:02:12] 2026-04-20 22:01:39,534 | INFO     | will attempt to kill all subprocesses of pid=3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:40,197 | INFO     | process IDs to be killed: [3950665] (in reverse order)
[2026-04-20 18:02:12] 2026-04-20 22:01:40,500 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 18:02:12] 2026-04-20 22:01:40,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 18:02:12] 2026-04-20 22:01:40,533 | INFO     | did not find any defunct processes belonging to 3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:40,563 | INFO     | did not find any defunct processes belonging to 3950665
[2026-04-20 18:02:12] 2026-04-20 22:01:40,564 | INFO     | Ready for new job
[2026-04-20 18:02:12] 2026-04-20 22:01:40,570 | INFO     | **************************************
[2026-04-20 18:02:12] 2026-04-20 22:01:40,570 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 18:02:12] 2026-04-20 22:01:40,570 | INFO     | **************************************
[2026-04-20 18:02:12] 2026-04-20 22:01:40,570 | INFO     | 
[2026-04-20 18:02:12] 2026-04-20 22:01:40,581 | INFO     | architecture information:
[2026-04-20 18:02:12] 2026-04-20 22:01:40,582 | INFO     | executing command: cat /etc/os-release
[2026-04-20 18:02:12] 2026-04-20 22:01:40,631 | INFO     | cat /etc/os-release:
[2026-04-20 18:02:12] NAME="CentOS Linux"
[2026-04-20 18:02:12] VERSION="7 (Core)"
[2026-04-20 18:02:12] ID="centos"
[2026-04-20 18:02:12] ID_LIKE="rhel fedora"
[2026-04-20 18:02:12] VERSION_ID="7"
[2026-04-20 18:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 18:02:12] ANSI_COLOR="0;31"
[2026-04-20 18:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 18:02:12] HOME_URL="https://www.centos.org/"
[2026-04-20 18:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 18:02:12] 
[2026-04-20 18:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 18:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 18:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 18:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 18:02:12] 
[2026-04-20 18:02:12] 2026-04-20 22:01:40,631 | INFO     | **************************************
[2026-04-20 18:02:12] 2026-04-20 22:01:41,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 18:02:12] 2026-04-20 22:01:41,190 | INFO     | sufficient remaining disk space (86426779648 B)
[2026-04-20 18:02:12] 2026-04-20 22:01:41,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 18:02:12] 2026-04-20 22:01:41,191 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 18:02:12] 2026-04-20 22:01:41,191 | INFO     | update_server=False
[2026-04-20 18:02:12] 2026-04-20 22:01:41,191 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 18:02:12] 2026-04-20 22:01:41,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 18:02:12] 2026-04-20 22:01:41,192 | INFO     | aborting loop
[2026-04-20 18:02:12] 2026-04-20 22:01:41,407 | INFO     | all job control threads have been joined
[2026-04-20 18:02:12] 2026-04-20 22:01:41,973 | INFO     | all data control threads have been joined
[2026-04-20 18:02:12] 2026-04-20 22:01:42,197 | INFO     | [job] retrieve thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,199 | INFO     | [job] job monitor thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,391 | INFO     | all payload control threads have been joined
[2026-04-20 18:02:12] 2026-04-20 22:01:42,414 | INFO     | [job] control thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,482 | INFO     | [data] copytool_in thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 18:02:12] 2026-04-20 22:01:42,646 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,684 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,952 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,953 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:42,975 | INFO     | [data] control thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:43,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 18:02:12] 2026-04-20 22:01:43,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 18:02:12] 2026-04-20 22:01:43,397 | INFO     | [payload] control thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:43,698 | INFO     | [job] validate thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:43,706 | INFO     | [payload] failed_post thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:43,719 | INFO     | [payload] validate_post thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:44,140 | INFO     | [job] queue monitor thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:44,513 | INFO     | [data] copytool_out thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:01:47,241 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 18:02:12] 2026-04-20 22:02:04,657 | INFO     | [monitor] cgroup control has ended
[2026-04-20 18:02:12] 2026-04-20 22:02:06,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624313296704)>', '<ExcThread(monitor, started 140623965300480)>']
[2026-04-20 18:02:12] 2026-04-20 22:02:11,284 | INFO     | all workflow threads have been joined
[2026-04-20 18:02:12] 2026-04-20 22:02:11,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 18:02:12] 2026-04-20 22:02:11,285 | INFO     | traces error code: 0
[2026-04-20 18:02:12] 2026-04-20 22:02:11,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 18:02:12] 2026-04-20 22:02:11,463 | INFO     | PID=3945867 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | INFO     | .. there are 16 such processes running
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 18:02:12] 2026-04-20 22:02:11,464 | INFO     | [monitor] control thread has ended
[2026-04-20 18:02:12] 2026-04-20 22:02:11,719 [wrapper] ==== pilot stdout END ====
[2026-04-20 18:02:12] 2026-04-20 22:02:11,729 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 18:02:12] 2026-04-20 22:02:11,736 [wrapper] pilotpid: 3945867
[2026-04-20 18:02:12] 2026-04-20 22:02:11,743 [wrapper] Pilot exit status: 0
[2026-04-20 18:02:12] 2026-04-20 22:02:11,788 [wrapper] pandaids: 7088335378
[2026-04-20 18:02:12] 2026-04-20 22:02:12,004 [wrapper] cleanup supervisor_pilot  499074 3945868
[2026-04-20 18:02:12] 2026-04-20 22:02:12,015 [wrapper] Test setup, not cleaning
[2026-04-20 18:02:12] 2026-04-20 22:02:12,023 [wrapper] apfmon messages muted
[2026-04-20 18:02:12] 2026-04-20 22:02:12,031 [wrapper] ==== wrapper stdout END ====
[2026-04-20 18:02:12] 2026-04-20 22:02:12,037 [wrapper] ==== wrapper stderr END ====
[2026-04-20 18:02:12]  *** Error codes and diagnostics ***
[2026-04-20 18:02:12]     "exeErrorCode": 0,
[2026-04-20 18:02:12]     "pilotErrorCode": 0,
[2026-04-20 18:02:12]  *** Listing of results directory ***
[2026-04-20 18:02:12] total 411720
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas    644190 Apr 12 13:39 pilot3.tar.gz
[2026-04-20 18:02:12] -rwx------. 1 boincer umatlas     36322 Apr 12 14:32 runpilot2-wrapper.sh
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas      5094 Apr 12 14:36 queuedata.json
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas       100 Apr 20 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 18:02:12] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 20 10:01 run_atlas
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas       105 Apr 20 10:01 job.xml
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas 222050624 Apr 20 10:01 EVNT.49263198._001422.pool.root.1
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 10:01 start_atlas.sh
[2026-04-20 18:02:12] drwxrwx--x. 2 boincer umatlas      4096 Apr 20 10:01 shared
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas    656932 Apr 20 10:01 input.tar.gz
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas         0 Apr 20 10:01 boinc_lockfile
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas      2576 Apr 20 10:01 pandaJob.out
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas        57 Apr 20 10:01 setup.sh.local
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas    997272 Apr 20 10:02 agis_schedconf.cvmfs.json
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas       429 Apr 20 10:03 workernode_map.json
[2026-04-20 18:02:12] drwx------. 5 boincer umatlas      4096 Apr 20 10:03 pilot3
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas 189424593 Apr 20 18:00 HITS.49263200._053631.pool.root.1
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas       489 Apr 20 18:00 boinc_task_state.xml
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas      6826 Apr 20 18:00 init_data.xml
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas        95 Apr 20 18:01 pilot_heartbeat.json
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas      1031 Apr 20 18:01 memory_monitor_summary.json
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas   1512404 Apr 20 18:01 agis_ddmendpoints.agis.ALL.json
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas    554730 Apr 20 18:01 log.49263200._053631.job.log.tgz.1
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas      6355 Apr 20 18:01 heartbeat_new.json
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas      6246 Apr 20 18:01 heartbeat.json
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 18:01 boinc_mmap_file
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas        29 Apr 20 18:01 wrapper_checkpoint.txt
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas       823 Apr 20 18:02 pilotlog.txt
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas   2480536 Apr 20 18:02 log.49263200._053631.job.log.1
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas       357 Apr 20 18:02 output.list
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas       410 Apr 20 18:02 runtime_log
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas   3051520 Apr 20 18:02 result.tar.gz
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas      8966 Apr 20 18:02 runtime_log.err
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas       658 Apr 20 18:02 e54c343ccacd.diag
[2026-04-20 18:02:12] -rw-r--r--. 1 boincer umatlas     21355 Apr 20 18:02 stderr.txt
[2026-04-20 18:02:12] HITS file was successfully produced:
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas 189424593 Apr 20 18:00 shared/HITS.pool.root.1
[2026-04-20 18:02:12]  *** Contents of shared directory: ***
[2026-04-20 18:02:12] total 405480
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas 222050624 Apr 20 10:01 ATLAS.root_0
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 10:01 start_atlas.sh
[2026-04-20 18:02:12] -rw-r--r--. 2 boincer umatlas    656932 Apr 20 10:01 input.tar.gz
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas 189424593 Apr 20 18:00 HITS.pool.root.1
[2026-04-20 18:02:12] -rw-------. 1 boincer umatlas   3051520 Apr 20 18:02 result.tar.gz
18:02:13 (3941020): run_atlas exited; CPU time 99909.489746
18:02:13 (3941020): called boinc_finish(0)

</stderr_txt>
]]>

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