Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:01 (1705493): wrapper (7.7.26015): starting
05:43:01 (1705493): wrapper: running run_atlas (--nthreads 11)
[2026-04-20 05:43:01] Arguments: --nthreads 11
[2026-04-20 05:43:01] Threads: 11
[2026-04-20 05:43:01] Checking for CVMFS
[2026-04-20 05:43:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 05:43:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 05:43:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 05:43:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 05:43:02] 2.13.3.0 7109 238662 714924 158651 3 248 15380152 21042176 12151 16776704 0 787414082 99.400 1172980689 30601 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-20 05:43:02] CVMFS is ok
[2026-04-20 05:43:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 05:43:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 05:43:02] Further information can be found at the LHC@home message board.
[2026-04-20 05:43:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 05:43:02] Checking for apptainer binary...
[2026-04-20 05:43:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 05:43:02] Running /usr/bin/apptainer --version
[2026-04-20 05:43:03] apptainer version 1.4.5-2.el9
[2026-04-20 05:43:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 05:43:04] c-16-11.aglt2.org
[2026-04-20 05:43:04] apptainer works
[2026-04-20 05:43:04] Set ATHENA_PROC_NUMBER=11
[2026-04-20 05:43:04] Set ATHENA_CORE_NUMBER=11
[2026-04-20 05:43:04] Starting ATLAS job with PandaID=7090543549
[2026-04-20 05:43:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 12:15:03]  *** The last 200 lines of the pilot log: ***
[2026-04-20 12:15:03] 2026-04-20 16:14:22,396 | INFO     | maximum number of monitored processes: 6
[2026-04-20 12:15:03] 2026-04-20 16:14:22,838 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-20 12:15:03] 2026-04-20 16:14:23,601 | INFO     | PID=1709940 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-20 12:15:03] 2026-04-20 16:14:23,601 | INFO     | .. there are 16 such processes running
[2026-04-20 12:15:03] 2026-04-20 16:14:24,426 | INFO     | job 7090543549 has state=finished
[2026-04-20 12:15:03] 2026-04-20 16:14:24,426 | INFO     | preparing for final server update for job 7090543549 in state='finished'
[2026-04-20 12:15:03] 2026-04-20 16:14:24,427 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7090543549/jobReport.json
[2026-04-20 12:15:03] 2026-04-20 16:14:24,429 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-20 12:15:03] 2026-04-20 16:14:24,435 | INFO     | this job has now completed (state=finished)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,436 | INFO     | log transfer has been attempted: DONE
[2026-04-20 12:15:03] 2026-04-20 16:14:24,436 | INFO     | job 7090543549 has finished - writing final server update
[2026-04-20 12:15:03] 2026-04-20 16:14:24,436 | INFO     | total number of processed events: 400 (read)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,455 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7090543549/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,455 | INFO     | extracted standard info from prmon json
[2026-04-20 12:15:03] 2026-04-20 16:14:24,456 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 12:15:03] 2026-04-20 16:14:24,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 12:15:03] 2026-04-20 16:14:24,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 12:15:03] 2026-04-20 16:14:24,492 | INFO     | fitting pss+swap vs Time
[2026-04-20 12:15:03] 2026-04-20 16:14:24,493 | INFO     | sum of square deviations: 17420320640.652718
[2026-04-20 12:15:03] 2026-04-20 16:14:24,515 | INFO     | sum of deviations: 79466930856.54832
[2026-04-20 12:15:03] 2026-04-20 16:14:24,516 | INFO     | mean x (centered): 0.0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,516 | INFO     | mean y: 2663278.2950391644
[2026-04-20 12:15:03] 2026-04-20 16:14:24,516 | INFO     | intersect: 2663278.2950391644
[2026-04-20 12:15:03] 2026-04-20 16:14:24,517 | INFO     | chi2: 3.4418080893112357
[2026-04-20 12:15:03] 2026-04-20 16:14:24,517 | INFO     | sum of square deviations: 16746909156.941725
[2026-04-20 12:15:03] 2026-04-20 16:14:24,527 | INFO     | sum of deviations: 104400108129.95775
[2026-04-20 12:15:03] 2026-04-20 16:14:24,527 | INFO     | mean x (centered): 0.0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,527 | INFO     | mean y: 2668862.597883598
[2026-04-20 12:15:03] 2026-04-20 16:14:24,528 | INFO     | intersect: 2668862.597883598
[2026-04-20 12:15:03] 2026-04-20 16:14:24,528 | INFO     | chi2: 2.7499020087232213
[2026-04-20 12:15:03] 2026-04-20 16:14:24,528 | INFO     | current chi2=2.7499020087232213 (change=20.102982578743273 %)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,529 | INFO     | right removable region: 377
[2026-04-20 12:15:03] 2026-04-20 16:14:24,529 | INFO     | sum of square deviations: 16746851207.142857
[2026-04-20 12:15:03] 2026-04-20 16:14:24,534 | INFO     | sum of deviations: -22806626085.14286
[2026-04-20 12:15:03] 2026-04-20 16:14:24,534 | INFO     | mean x (centered): 0.0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,534 | INFO     | mean y: 2686388.9365079366
[2026-04-20 12:15:03] 2026-04-20 16:14:24,534 | INFO     | intersect: 2686388.9365079366
[2026-04-20 12:15:03] 2026-04-20 16:14:24,535 | INFO     | chi2: 1.018788963862306
[2026-04-20 12:15:03] 2026-04-20 16:14:24,535 | INFO     | current chi2=1.018788963862306 (change=70.39959993625958 %)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,536 | INFO     | sum of square deviations: 16090963498.605888
[2026-04-20 12:15:03] 2026-04-20 16:14:24,540 | INFO     | sum of deviations: -33248416061.243958
[2026-04-20 12:15:03] 2026-04-20 16:14:24,540 | INFO     | mean x (centered): 0.0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,540 | INFO     | mean y: 2688792.855227882
[2026-04-20 12:15:03] 2026-04-20 16:14:24,541 | INFO     | intersect: 2688792.855227882
[2026-04-20 12:15:03] 2026-04-20 16:14:24,541 | INFO     | chi2: 0.9516229228335494
[2026-04-20 12:15:03] 2026-04-20 16:14:24,542 | INFO     | current chi2=0.9516229228335494 (change=6.592733471917975 %)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,542 | INFO     | left removable region: 10
[2026-04-20 12:15:03] 2026-04-20 16:14:24,542 | INFO     | sum of square deviations: 15326858587.177156
[2026-04-20 12:15:03] 2026-04-20 16:14:24,546 | INFO     | sum of deviations: -7487893449.31066
[2026-04-20 12:15:03] 2026-04-20 16:14:24,547 | INFO     | mean x (centered): 0.0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,547 | INFO     | mean y: 2694880.3923705723
[2026-04-20 12:15:03] 2026-04-20 16:14:24,547 | INFO     | intersect: 2694880.3923705723
[2026-04-20 12:15:03] 2026-04-20 16:14:24,548 | INFO     | chi2: 0.2427438189239398
[2026-04-20 12:15:03] 2026-04-20 16:14:24,548 | INFO     | current memory leak: -0.49 B/s (using 367 data points, chi2=0.24)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,549 | INFO     | could have reported an average CPU frequency of 2900 MHz (16 samples)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,549 | INFO     | ..............................
[2026-04-20 12:15:03] 2026-04-20 16:14:24,549 | INFO     | . Timing measurements:
[2026-04-20 12:15:03] 2026-04-20 16:14:24,549 | INFO     | . get job = 0 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . initial setup = 34 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . payload setup = 54 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . stage-in = 0 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . payload execution = 23338 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . stage-out = 4 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | . log creation = 0 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,550 | INFO     | ..............................
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | 
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | job summary report
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | --------------------------------------------------
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | PanDA job id: 7090543549
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | task id: 49263208
[2026-04-20 12:15:03] 2026-04-20 16:14:24,759 | INFO     | errors: (none)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | pilot state: finished 
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | transexitcode: 0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | exeerrorcode: 0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | exeerrordiag: 
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | exitcode: 0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,760 | INFO     | exitmsg: OK
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | cpuconsumptiontime: 74579 s
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | nevents: 400
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | neventsw: 0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | pid: 1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | pgrp: 1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | corecount: 11
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | event service: False
[2026-04-20 12:15:03] 2026-04-20 16:14:24,761 | INFO     | sizes: {0: 2281581, 1: 2281637, 2: 2281665, 3: 2283522, 4: 2283522, 23396: 2318344, 23397: 2318471, 23402: 2327525, 23403: 2327581, 23405: 2327775}
[2026-04-20 12:15:03] 2026-04-20 16:14:24,762 | INFO     | --------------------------------------------------
[2026-04-20 12:15:03] 2026-04-20 16:14:24,762 | INFO     | 
[2026-04-20 12:15:03] 2026-04-20 16:14:24,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-20 12:15:03] 2026-04-20 16:14:24,937 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,941 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 12:15:03] 2026-04-20 16:14:24,949 | INFO     | job 7090543549 has completed (purged errors)
[2026-04-20 12:15:03] 2026-04-20 16:14:24,949 | INFO     | overall cleanup function is called
[2026-04-20 12:15:03] 2026-04-20 16:14:25,965 | INFO     | --- collectZombieJob: --- 10, [1716424]
[2026-04-20 12:15:03] 2026-04-20 16:14:25,965 | INFO     | zombie collector waiting for pid 1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:25,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 12:15:03] 2026-04-20 16:14:25,966 | INFO     | collected zombie processes
[2026-04-20 12:15:03] 2026-04-20 16:14:25,966 | INFO     | will attempt to kill all subprocesses of pid=1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:26,922 | INFO     | process IDs to be killed: [1716424] (in reverse order)
[2026-04-20 12:15:03] 2026-04-20 16:14:27,101 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 12:15:03] 2026-04-20 16:14:27,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 12:15:03] 2026-04-20 16:14:27,155 | INFO     | did not find any defunct processes belonging to 1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:27,201 | INFO     | did not find any defunct processes belonging to 1716424
[2026-04-20 12:15:03] 2026-04-20 16:14:27,201 | INFO     | Ready for new job
[2026-04-20 12:15:03] 2026-04-20 16:14:27,204 | INFO     | **************************************
[2026-04-20 12:15:03] 2026-04-20 16:14:27,204 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 12:15:03] 2026-04-20 16:14:27,204 | INFO     | **************************************
[2026-04-20 12:15:03] 2026-04-20 16:14:27,204 | INFO     | 
[2026-04-20 12:15:03] 2026-04-20 16:14:27,206 | INFO     | architecture information:
[2026-04-20 12:15:03] 2026-04-20 16:14:27,210 | INFO     | executing command: cat /etc/os-release
[2026-04-20 12:15:03] 2026-04-20 16:14:27,230 | INFO     | cat /etc/os-release:
[2026-04-20 12:15:03] NAME="CentOS Linux"
[2026-04-20 12:15:03] VERSION="7 (Core)"
[2026-04-20 12:15:03] ID="centos"
[2026-04-20 12:15:03] ID_LIKE="rhel fedora"
[2026-04-20 12:15:03] VERSION_ID="7"
[2026-04-20 12:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 12:15:03] ANSI_COLOR="0;31"
[2026-04-20 12:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 12:15:03] HOME_URL="https://www.centos.org/"
[2026-04-20 12:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 12:15:03] 
[2026-04-20 12:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 12:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 12:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 12:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 12:15:03] 
[2026-04-20 12:15:03] 2026-04-20 16:14:27,230 | INFO     | **************************************
[2026-04-20 12:15:03] 2026-04-20 16:14:27,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 12:15:03] 2026-04-20 16:14:27,827 | INFO     | sufficient remaining disk space (53766782976 B)
[2026-04-20 12:15:03] 2026-04-20 16:14:27,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 12:15:03] 2026-04-20 16:14:27,828 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 12:15:03] 2026-04-20 16:14:27,828 | INFO     | update_server=False
[2026-04-20 12:15:03] 2026-04-20 16:14:27,828 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 12:15:03] 2026-04-20 16:14:27,865 | INFO     | all data control threads have been joined
[2026-04-20 12:15:03] 2026-04-20 16:14:28,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 12:15:03] 2026-04-20 16:14:28,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 12:15:03] 2026-04-20 16:14:28,525 | INFO     | aborting loop
[2026-04-20 12:15:03] 2026-04-20 16:14:28,764 | INFO     | all job control threads have been joined
[2026-04-20 12:15:03] 2026-04-20 16:14:28,834 | INFO     | [job] retrieve thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:28,871 | INFO     | [data] control thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:28,874 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:28,954 | INFO     | [payload] failed_post thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,015 | INFO     | all payload control threads have been joined
[2026-04-20 12:15:03] 2026-04-20 16:14:29,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 12:15:03] 2026-04-20 16:14:29,394 | INFO     | [payload] validate_post thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,430 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,501 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,531 | INFO     | [job] job monitor thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,560 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,770 | INFO     | [job] control thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:29,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 12:15:03] 2026-04-20 16:14:30,004 | INFO     | [job] validate thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:30,021 | INFO     | [payload] control thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:30,059 | INFO     | [data] copytool_in thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:30,071 | INFO     | [data] copytool_out thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:30,811 | INFO     | [job] queue monitor thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:33,386 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 12:15:03] 2026-04-20 16:14:57,205 | INFO     | [monitor] cgroup control has ended
[2026-04-20 12:15:03] 2026-04-20 16:14:57,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717075818304)>', '<ExcThread(monitor, started 140716709750528)>']
[2026-04-20 12:15:03] 2026-04-20 16:14:58,334 | INFO     | PID=1709940 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 12:15:03] 2026-04-20 16:14:58,334 | INFO     | .. there are 16 such processes running
[2026-04-20 12:15:03] 2026-04-20 16:14:58,340 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 12:15:03] 2026-04-20 16:14:58,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 12:15:03] 2026-04-20 16:14:58,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 12:15:03] 2026-04-20 16:14:58,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 12:15:03] 2026-04-20 16:14:58,345 | INFO     | [monitor] control thread has ended
[2026-04-20 12:15:03] 2026-04-20 16:15:02,852 | INFO     | all workflow threads have been joined
[2026-04-20 12:15:03] 2026-04-20 16:15:02,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 12:15:03] 2026-04-20 16:15:02,853 | INFO     | traces error code: 0
[2026-04-20 12:15:03] 2026-04-20 16:15:02,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 12:15:03] 2026-04-20 16:15:03,204 [wrapper] ==== pilot stdout END ====
[2026-04-20 12:15:03] 2026-04-20 16:15:03,217 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 12:15:03] 2026-04-20 16:15:03,262 [wrapper] pilotpid: 1709940
[2026-04-20 12:15:03] 2026-04-20 16:15:03,312 [wrapper] Pilot exit status: 0
[2026-04-20 12:15:03] 2026-04-20 16:15:03,376 [wrapper] pandaids: 7090543549
[2026-04-20 12:15:03] 2026-04-20 16:15:03,597 [wrapper] cleanup supervisor_pilot 3783482 1709941
[2026-04-20 12:15:03] 2026-04-20 16:15:03,601 [wrapper] Test setup, not cleaning
[2026-04-20 12:15:03] 2026-04-20 16:15:03,604 [wrapper] apfmon messages muted
[2026-04-20 12:15:03] 2026-04-20 16:15:03,607 [wrapper] ==== wrapper stdout END ====
[2026-04-20 12:15:03] 2026-04-20 16:15:03,609 [wrapper] ==== wrapper stderr END ====
[2026-04-20 12:15:03]  *** Error codes and diagnostics ***
[2026-04-20 12:15:03]     "exeErrorCode": 0,
[2026-04-20 12:15:03]     "pilotErrorCode": 0,
[2026-04-20 12:15:03]  *** Listing of results directory ***
[2026-04-20 12:15:03] total 414096
[2026-04-20 12:15:03] -rwx------. 1 boincer umatlas     36322 Apr 18 04:53 runpilot2-wrapper.sh
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 05:06 queuedata.json
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas       100 Apr 20 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 12:15:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 20 05:43 run_atlas
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas       105 Apr 20 05:43 job.xml
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas 224250313 Apr 20 05:43 EVNT.49263206._000581.pool.root.1
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 05:43 start_atlas.sh
[2026-04-20 12:15:03] drwxrwx--x. 2 boincer umatlas      4096 Apr 20 05:43 shared
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas    656934 Apr 20 05:43 input.tar.gz
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas         0 Apr 20 05:43 boinc_lockfile
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas      2575 Apr 20 05:43 pandaJob.out
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas        57 Apr 20 05:43 setup.sh.local
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas    997264 Apr 20 05:43 agis_schedconf.cvmfs.json
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas       434 Apr 20 05:44 workernode_map.json
[2026-04-20 12:15:03] drwx------. 5 boincer umatlas      4096 Apr 20 05:44 pilot3
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas      6439 Apr 20 12:10 init_data.xml
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas 190862695 Apr 20 12:13 HITS.49263208._039432.pool.root.1
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas       488 Apr 20 12:13 boinc_task_state.xml
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas      1039 Apr 20 12:14 memory_monitor_summary.json
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas   1512404 Apr 20 12:14 agis_ddmendpoints.agis.ALL.json
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas    523379 Apr 20 12:14 log.49263208._039432.job.log.tgz.1
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas      6401 Apr 20 12:14 heartbeat_new.json
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas      6292 Apr 20 12:14 heartbeat.json
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas        95 Apr 20 12:14 pilot_heartbeat.json
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 12:15 boinc_mmap_file
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas        28 Apr 20 12:15 wrapper_checkpoint.txt
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas      4819 Apr 20 12:15 pilotlog.txt
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas   1902308 Apr 20 12:15 log.49263208._039432.job.log.1
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas       357 Apr 20 12:15 output.list
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas       410 Apr 20 12:15 runtime_log
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas   2447360 Apr 20 12:15 result.tar.gz
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas      8961 Apr 20 12:15 runtime_log.err
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas       656 Apr 20 12:15 46817f89653d.diag
[2026-04-20 12:15:03] -rw-r--r--. 1 boincer umatlas     21360 Apr 20 12:15 stderr.txt
[2026-04-20 12:15:03] HITS file was successfully produced:
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas 190862695 Apr 20 12:13 shared/HITS.pool.root.1
[2026-04-20 12:15:03]  *** Contents of shared directory: ***
[2026-04-20 12:15:03] total 408448
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas 224250313 Apr 20 05:43 ATLAS.root_0
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 05:43 start_atlas.sh
[2026-04-20 12:15:03] -rw-r--r--. 2 boincer umatlas    656934 Apr 20 05:43 input.tar.gz
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas 190862695 Apr 20 12:13 HITS.pool.root.1
[2026-04-20 12:15:03] -rw-------. 1 boincer umatlas   2447360 Apr 20 12:15 result.tar.gz
12:15:05 (1705493): run_atlas exited; CPU time 75593.291116
12:15:05 (1705493): called boinc_finish(0)

</stderr_txt>
]]>

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