Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:41:46 (1766900): wrapper (7.7.26015): starting
05:41:46 (1766900): wrapper: running run_atlas (--nthreads 9)
[2026-04-20 05:41:46] Arguments: --nthreads 9
[2026-04-20 05:41:46] Threads: 9
[2026-04-20 05:41:46] Checking for CVMFS
[2026-04-20 05:41:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 05:41:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 05:41:47] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 05:41:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 05:41:48] 2.13.3.0 11793 238684 630112 158651 3 69 29774089 32935937 23599 16776704 0 912818703 99.581 1098370861 33647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-20 05:41:48] CVMFS is ok
[2026-04-20 05:41:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 05:41:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 05:41:48] Further information can be found at the LHC@home message board.
[2026-04-20 05:41:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 05:41:48] Checking for apptainer binary...
[2026-04-20 05:41:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 05:41:48] Running /usr/bin/apptainer --version
[2026-04-20 05:41:49] apptainer version 1.4.5-2.el9
[2026-04-20 05:41:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 05:41:51] c6-2-11-2.aglt2.org
[2026-04-20 05:41:51] apptainer works
[2026-04-20 05:41:51] Set ATHENA_PROC_NUMBER=9
[2026-04-20 05:41:51] Set ATHENA_CORE_NUMBER=9
[2026-04-20 05:41:51] Starting ATLAS job with PandaID=7097809919
[2026-04-20 05:41:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 08:01:40]  *** The last 200 lines of the pilot log: ***
[2026-04-20 08:01:40] 2026-04-20 12:00:22,370 | INFO     | sum of square deviations: 762875651.3333313
[2026-04-20 08:01:40] 2026-04-20 12:00:22,371 | INFO     | sum of deviations: -6466158712.888895
[2026-04-20 08:01:40] 2026-04-20 12:00:22,372 | INFO     | mean x (centered): 0.0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,372 | INFO     | mean y: 2635168.725925926
[2026-04-20 08:01:40] 2026-04-20 12:00:22,372 | INFO     | intersect: 2635168.725925926
[2026-04-20 08:01:40] 2026-04-20 12:00:22,373 | INFO     | chi2: 2.7680108941933437
[2026-04-20 08:01:40] 2026-04-20 12:00:22,373 | INFO     | sum of square deviations: 681213578.7692302
[2026-04-20 08:01:40] 2026-04-20 12:00:22,374 | INFO     | sum of deviations: 2546767366.9230757
[2026-04-20 08:01:40] 2026-04-20 12:00:22,374 | INFO     | mean x (centered): 0.0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,374 | INFO     | mean y: 2651500.2384615387
[2026-04-20 08:01:40] 2026-04-20 12:00:22,374 | INFO     | intersect: 2651500.2384615387
[2026-04-20 08:01:40] 2026-04-20 12:00:22,374 | INFO     | chi2: 2.0986321776106784
[2026-04-20 08:01:40] 2026-04-20 12:00:22,375 | INFO     | current chi2=2.0986321776106784 (change=24.182661924736976 %)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,375 | INFO     | right removable region: 129
[2026-04-20 08:01:40] 2026-04-20 12:00:22,375 | INFO     | sum of square deviations: 681204428.7692302
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | sum of deviations: -32748283524.23078
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | mean x (centered): 0.0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | mean y: 2683613.315384615
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | intersect: 2683613.315384615
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | chi2: 0.9413729900173338
[2026-04-20 08:01:40] 2026-04-20 12:00:22,376 | INFO     | current chi2=0.9413729900173338 (change=65.99099403863909 %)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,377 | INFO     | sum of square deviations: 605587638.4319985
[2026-04-20 08:01:40] 2026-04-20 12:00:22,377 | INFO     | sum of deviations: -30417954719.072002
[2026-04-20 08:01:40] 2026-04-20 12:00:22,377 | INFO     | mean x (centered): 0.0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,377 | INFO     | mean y: 2678770.648
[2026-04-20 08:01:40] 2026-04-20 12:00:22,378 | INFO     | intersect: 2678770.648
[2026-04-20 08:01:40] 2026-04-20 12:00:22,378 | INFO     | chi2: 0.9217881968935131
[2026-04-20 08:01:40] 2026-04-20 12:00:22,378 | INFO     | current chi2=0.9217881968935131 (change=2.080449867534445 %)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,378 | INFO     | left removable region: 10
[2026-04-20 08:01:40] 2026-04-20 12:00:22,378 | INFO     | sum of square deviations: 522502832.3529409
[2026-04-20 08:01:40] 2026-04-20 12:00:22,379 | INFO     | sum of deviations: -21064068834.82354
[2026-04-20 08:01:40] 2026-04-20 12:00:22,379 | INFO     | mean x (centered): 0.0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,379 | INFO     | mean y: 2698641.2016806724
[2026-04-20 08:01:40] 2026-04-20 12:00:22,379 | INFO     | intersect: 2698641.2016806724
[2026-04-20 08:01:40] 2026-04-20 12:00:22,379 | INFO     | chi2: 0.20603261973543474
[2026-04-20 08:01:40] 2026-04-20 12:00:22,380 | INFO     | current memory leak: -40.31 B/s (using 119 data points, chi2=0.21)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,380 | INFO     | could have reported an average CPU frequency of 2669 MHz (8 samples)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,380 | INFO     | ..............................
[2026-04-20 08:01:40] 2026-04-20 12:00:22,380 | INFO     | . Timing measurements:
[2026-04-20 08:01:40] 2026-04-20 12:00:22,380 | INFO     | . get job = 0 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . initial setup = 26 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . payload setup = 29 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . stage-in = 0 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . payload execution = 8204 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . stage-out = 1 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | . log creation = 0 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,381 | INFO     | ..............................
[2026-04-20 08:01:40] 2026-04-20 12:00:22,657 | WARNING  | process 1781231 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 08:01:40] 2026-04-20 12:00:22,658 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7097809919/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,658 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7097809919/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,659 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-20 08:01:40] 2026-04-20 12:00:22,659 | WARNING  | maxPSS not found in memory monitor output
[2026-04-20 08:01:40] 2026-04-20 12:00:22,660 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3201009 B
[2026-04-20 08:01:40] 2026-04-20 12:00:22,660 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15598 B
[2026-04-20 08:01:40] 2026-04-20 12:00:22,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,668 | INFO     | 
[2026-04-20 08:01:40] 2026-04-20 12:00:22,668 | INFO     | job summary report
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | --------------------------------------------------
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | PanDA job id: 7097809919
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | task id: 49545114
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | errors: (none)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | pilot state: finished 
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | transexitcode: 0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | exeerrorcode: 0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | exeerrordiag: 
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | exitcode: 0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | exitmsg: OK
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | cpuconsumptiontime: 44964 s
[2026-04-20 08:01:40] 2026-04-20 12:00:22,669 | INFO     | nevents: 400
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | neventsw: 0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | pid: 1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | pgrp: 1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | corecount: 9
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | event service: False
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | sizes: {0: 2281630, 1: 2283459, 8238: 2311290, 8239: 2320288, 8242: 2320538}
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | --------------------------------------------------
[2026-04-20 08:01:40] 2026-04-20 12:00:22,670 | INFO     | 
[2026-04-20 08:01:40] 2026-04-20 12:00:22,671 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-20 08:01:40] 2026-04-20 12:00:22,721 | INFO     | sufficient remaining disk space (96496254976 B)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,722 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,723 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7097809919: 3523607 B (within 5033164800 B limit)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,724 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7097809919/HITS.49545114._029398.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,724 | INFO     | total size of present files: 0 B (workdir size: 3523607 B)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,724 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7097809919/HITS.49545114._029398.pool.root.1 since it does not exist
[2026-04-20 08:01:40] 2026-04-20 12:00:22,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | job 7097809919 has completed (purged errors)
[2026-04-20 08:01:40] 2026-04-20 12:00:22,747 | INFO     | overall cleanup function is called
[2026-04-20 08:01:40] 2026-04-20 12:00:23,256 | INFO     | number of running child processes to parent process 1781231: 1
[2026-04-20 08:01:40] 2026-04-20 12:00:23,257 | INFO     | maximum number of monitored processes: 6
[2026-04-20 08:01:40] 2026-04-20 12:00:23,257 | INFO     | aborting job monitoring since job object (job id=7097809919) has expired
[2026-04-20 08:01:40] 2026-04-20 12:00:23,756 | INFO     | --- collectZombieJob: --- 10, [1781231]
[2026-04-20 08:01:40] 2026-04-20 12:00:23,757 | INFO     | zombie collector waiting for pid 1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:23,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 08:01:40] 2026-04-20 12:00:23,757 | INFO     | collected zombie processes
[2026-04-20 08:01:40] 2026-04-20 12:00:23,757 | INFO     | will attempt to kill all subprocesses of pid=1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:24,264 | INFO     | process IDs to be killed: [1781231] (in reverse order)
[2026-04-20 08:01:40] 2026-04-20 12:00:24,535 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 08:01:40] 2026-04-20 12:00:24,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 08:01:40] 2026-04-20 12:00:24,566 | INFO     | did not find any defunct processes belonging to 1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:24,584 | INFO     | did not find any defunct processes belonging to 1781231
[2026-04-20 08:01:40] 2026-04-20 12:00:24,584 | INFO     | Ready for new job
[2026-04-20 08:01:40] 2026-04-20 12:00:24,586 | INFO     | **************************************
[2026-04-20 08:01:40] 2026-04-20 12:00:24,587 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 08:01:40] 2026-04-20 12:00:24,587 | INFO     | **************************************
[2026-04-20 08:01:40] 2026-04-20 12:00:24,587 | INFO     | 
[2026-04-20 08:01:40] 2026-04-20 12:00:24,593 | INFO     | architecture information:
[2026-04-20 08:01:40] 2026-04-20 12:00:24,593 | INFO     | executing command: cat /etc/os-release
[2026-04-20 08:01:40] 2026-04-20 12:00:24,667 | INFO     | cat /etc/os-release:
[2026-04-20 08:01:40] NAME="CentOS Linux"
[2026-04-20 08:01:40] VERSION="7 (Core)"
[2026-04-20 08:01:40] ID="centos"
[2026-04-20 08:01:40] ID_LIKE="rhel fedora"
[2026-04-20 08:01:40] VERSION_ID="7"
[2026-04-20 08:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 08:01:40] ANSI_COLOR="0;31"
[2026-04-20 08:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 08:01:40] HOME_URL="https://www.centos.org/"
[2026-04-20 08:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 08:01:40] 
[2026-04-20 08:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 08:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 08:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 08:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 08:01:40] 
[2026-04-20 08:01:40] 2026-04-20 12:00:24,667 | INFO     | **************************************
[2026-04-20 08:01:40] 2026-04-20 12:00:25,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-20 08:01:40] 2026-04-20 12:00:25,279 | INFO     | sufficient remaining disk space (96500449280 B)
[2026-04-20 08:01:40] 2026-04-20 12:00:25,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 08:01:40] 2026-04-20 12:00:25,279 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 08:01:40] 2026-04-20 12:00:25,280 | INFO     | update_server=False
[2026-04-20 08:01:40] 2026-04-20 12:00:25,280 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 08:01:40] 2026-04-20 12:00:25,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 08:01:40] 2026-04-20 12:00:25,311 | INFO     | all job control threads have been joined
[2026-04-20 08:01:40] 2026-04-20 12:00:25,762 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-20 08:01:40] 2026-04-20 12:00:25,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-20 08:01:40] 2026-04-20 12:00:25,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 08:01:40] 2026-04-20 12:00:25,763 | INFO     | will abort loop
[2026-04-20 08:01:40] 2026-04-20 12:00:25,842 | INFO     | all data control threads have been joined
[2026-04-20 08:01:40] 2026-04-20 12:00:26,141 | INFO     | all payload control threads have been joined
[2026-04-20 08:01:40] 2026-04-20 12:00:26,285 | INFO     | [job] retrieve thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,317 | INFO     | [job] control thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,384 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,757 | INFO     | [job] validate thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,768 | INFO     | [job] job monitor thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,848 | INFO     | [data] control thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:26,854 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,025 | INFO     | [payload] validate_post thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,119 | INFO     | [data] copytool_in thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,131 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,147 | INFO     | [payload] control thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,287 | INFO     | [data] copytool_out thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,343 | INFO     | [payload] failed_post thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:27,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 08:01:40] 2026-04-20 12:00:27,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 08:01:40] 2026-04-20 12:00:28,581 | INFO     | [job] queue monitor thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:31,989 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 08:01:40] 2026-04-20 12:00:55,974 | INFO     | PID=1773434 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 08:01:40] 2026-04-20 12:00:55,974 | INFO     | .. there are 20 such processes running
[2026-04-20 08:01:40] 2026-04-20 12:00:55,975 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 08:01:40] 2026-04-20 12:00:55,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 08:01:40] 2026-04-20 12:00:55,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 08:01:40] 2026-04-20 12:01:11,909 | INFO     | [monitor] cgroup control has ended
[2026-04-20 08:01:40] 2026-04-20 12:01:13,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723615852352)>', '<ExcThread(monitor, started 139723095910144)>']
[2026-04-20 08:01:40] 2026-04-20 12:01:14,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 08:01:40] 2026-04-20 12:01:14,084 | INFO     | [monitor] control thread has ended
[2026-04-20 08:01:40] 2026-04-20 12:01:18,994 | INFO     | all workflow threads have been joined
[2026-04-20 08:01:40] 2026-04-20 12:01:18,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 08:01:40] 2026-04-20 12:01:18,995 | INFO     | traces error code: 0
[2026-04-20 08:01:40] 2026-04-20 12:01:18,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 08:01:40] 2026-04-20 12:01:19,458 [wrapper] ==== pilot stdout END ====
[2026-04-20 08:01:40] 2026-04-20 12:01:19,508 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 08:01:40] 2026-04-20 12:01:19,544 [wrapper] pilotpid: 1773434
[2026-04-20 08:01:40] 2026-04-20 12:01:19,584 [wrapper] Pilot exit status: 0
[2026-04-20 08:01:40] 2026-04-20 12:01:19,741 [wrapper] pandaids: 7097809919
[2026-04-20 08:01:40] 2026-04-20 12:01:20,151 [wrapper] cleanup supervisor_pilot 2081049 1773435
[2026-04-20 08:01:40] 2026-04-20 12:01:20,166 [wrapper] Test setup, not cleaning
[2026-04-20 08:01:40] 2026-04-20 12:01:20,189 [wrapper] apfmon messages muted
[2026-04-20 08:01:40] 2026-04-20 12:01:20,196 [wrapper] ==== wrapper stdout END ====
[2026-04-20 08:01:40] 2026-04-20 12:01:20,199 [wrapper] ==== wrapper stderr END ====
[2026-04-20 08:01:40]  *** Error codes and diagnostics ***
[2026-04-20 08:01:40]     "exeErrorCode": 0,
[2026-04-20 08:01:40]     "pilotErrorCode": 0,
[2026-04-20 08:01:40]  *** Listing of results directory ***
[2026-04-20 08:01:40] total 460272
[2026-04-20 08:01:40] -rwx------. 1 boincer umatlas     36322 Apr 18 04:46 runpilot2-wrapper.sh
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 05:02 queuedata.json
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas       100 Apr 20 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 08:01:40] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 20 05:41 run_atlas
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas       105 Apr 20 05:41 job.xml
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas 278771998 Apr 20 05:41 EVNT.49539591._000458.pool.root.1
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 05:41 start_atlas.sh
[2026-04-20 08:01:40] drwxrwx--x. 2 boincer umatlas      4096 Apr 20 05:41 shared
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas    656940 Apr 20 05:41 input.tar.gz
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas         0 Apr 20 05:41 boinc_lockfile
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas      2606 Apr 20 05:41 pandaJob.out
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas        57 Apr 20 05:41 setup.sh.local
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas    997264 Apr 20 05:42 agis_schedconf.cvmfs.json
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas   1512404 Apr 20 05:42 agis_ddmendpoints.agis.ALL.json
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas       438 Apr 20 05:42 workernode_map.json
[2026-04-20 08:01:40] drwx------. 5 boincer umatlas      4096 Apr 20 05:42 pilot3
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas 186314426 Apr 20 07:59 HITS.49545114._029398.pool.root.1
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas       487 Apr 20 07:59 boinc_task_state.xml
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas        95 Apr 20 08:00 pilot_heartbeat.json
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas      1043 Apr 20 08:00 memory_monitor_summary.json
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas      6791 Apr 20 08:00 init_data.xml
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas    342490 Apr 20 08:00 log.49545114._029398.job.log.tgz.1
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas      6409 Apr 20 08:00 heartbeat_new.json
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas      6300 Apr 20 08:00 heartbeat.json
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas      5005 Apr 20 08:01 pilotlog.txt
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas    743186 Apr 20 08:01 log.49545114._029398.job.log.1
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas       357 Apr 20 08:01 output.list
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas       410 Apr 20 08:01 runtime_log
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas   1105920 Apr 20 08:01 result.tar.gz
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas      8968 Apr 20 08:01 runtime_log.err
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas       655 Apr 20 08:01 44da074820d2.diag
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas        27 Apr 20 08:01 wrapper_checkpoint.txt
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 08:01 boinc_mmap_file
[2026-04-20 08:01:40] -rw-r--r--. 1 boincer umatlas     21635 Apr 20 08:01 stderr.txt
[2026-04-20 08:01:40] HITS file was successfully produced:
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas 186314426 Apr 20 07:59 shared/HITS.pool.root.1
[2026-04-20 08:01:40]  *** Contents of shared directory: ***
[2026-04-20 08:01:40] total 455932
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas 278771998 Apr 20 05:41 ATLAS.root_0
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas     15665 Apr 20 05:41 start_atlas.sh
[2026-04-20 08:01:40] -rw-r--r--. 2 boincer umatlas    656940 Apr 20 05:41 input.tar.gz
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas 186314426 Apr 20 07:59 HITS.pool.root.1
[2026-04-20 08:01:40] -rw-------. 1 boincer umatlas   1105920 Apr 20 08:01 result.tar.gz
08:01:42 (1766900): run_atlas exited; CPU time 45331.713442
08:01:42 (1766900): called boinc_finish(0)

</stderr_txt>
]]>

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