Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
21:09:09 (859814): wrapper (7.7.26015): starting
21:09:09 (859814): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 21:09:09] Arguments: --nthreads 4
[2026-04-19 21:09:09] Threads: 4
[2026-04-19 21:09:09] Checking for CVMFS
[2026-04-19 21:09:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 21:09:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 21:09:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 21:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 21:09:09] 2.13.3.0 844120 0 35420 158637 3 79 2225531 4096001 200 130560 0 54627 99.973 1554 1090 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-19 21:09:09] CVMFS is ok
[2026-04-19 21:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 21:09:09] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-19 21:09:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-19 21:09:09] Further information can be found at the LHC@home message board.
[2026-04-19 21:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 21:09:09] Checking for apptainer binary...
[2026-04-19 21:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 21:09:09] Running /usr/bin/apptainer --version
[2026-04-19 21:09:10] apptainer version 1.4.5
[2026-04-19 21:09:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 21:09:10] P9X79
[2026-04-19 21:09:10] apptainer works
[2026-04-19 21:09:10] Set ATHENA_PROC_NUMBER=4
[2026-04-19 21:09:10] Set ATHENA_CORE_NUMBER=4
[2026-04-19 21:09:10] Starting ATLAS job with PandaID=7098006001
[2026-04-19 21:09:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 02:17:20]  *** The last 200 lines of the pilot log: ***
[2026-04-20 02:17:20] 2026-04-20 06:16:47,412 | INFO     | sum of square deviations: 8540720135.5
[2026-04-20 02:17:20] 2026-04-20 06:16:47,415 | INFO     | sum of deviations: 55406252786.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,415 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,416 | INFO     | mean y: 2312509.9337748345
[2026-04-20 02:17:20] 2026-04-20 06:16:47,416 | INFO     | intersect: 2312509.9337748345
[2026-04-20 02:17:20] 2026-04-20 06:16:47,416 | INFO     | chi2: 1.4518951264693145
[2026-04-20 02:17:20] 2026-04-20 06:16:47,417 | INFO     | sum of square deviations: 8123493708.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,420 | INFO     | sum of deviations: 54238809776.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,421 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,421 | INFO     | mean y: 2312083.0033670035
[2026-04-20 02:17:20] 2026-04-20 06:16:47,421 | INFO     | intersect: 2312083.0033670035
[2026-04-20 02:17:20] 2026-04-20 06:16:47,422 | INFO     | chi2: 1.452135962042156
[2026-04-20 02:17:20] 2026-04-20 06:16:47,422 | INFO     | current chi2=1.452135962042156 (change=-0.016587670035578858 %)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,422 | INFO     | right removable region: 296
[2026-04-20 02:17:20] 2026-04-20 06:16:47,423 | INFO     | sum of square deviations: 8123493708.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,425 | INFO     | sum of deviations: 12944248739.000002
[2026-04-20 02:17:20] 2026-04-20 06:16:47,426 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,426 | INFO     | mean y: 2327907.5656565656
[2026-04-20 02:17:20] 2026-04-20 06:16:47,426 | INFO     | intersect: 2327907.5656565656
[2026-04-20 02:17:20] 2026-04-20 06:16:47,427 | INFO     | chi2: 0.008160495662330392
[2026-04-20 02:17:20] 2026-04-20 06:16:47,427 | INFO     | current chi2=0.008160495662330392 (change=99.43794179665201 %)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,428 | INFO     | sum of square deviations: 7720081493.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,430 | INFO     | sum of deviations: 12173214534.000002
[2026-04-20 02:17:20] 2026-04-20 06:16:47,431 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,431 | INFO     | mean y: 2328189.5410958906
[2026-04-20 02:17:20] 2026-04-20 06:16:47,431 | INFO     | intersect: 2328189.5410958906
[2026-04-20 02:17:20] 2026-04-20 06:16:47,432 | INFO     | chi2: 0.004381751625352826
[2026-04-20 02:17:20] 2026-04-20 06:16:47,432 | INFO     | current chi2=0.004381751625352826 (change=46.30532498682158 %)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,432 | INFO     | sum of square deviations: 7330250928.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,435 | INFO     | sum of deviations: 11010919924.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,436 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,436 | INFO     | mean y: 2328648.06271777
[2026-04-20 02:17:20] 2026-04-20 06:16:47,436 | INFO     | intersect: 2328648.06271777
[2026-04-20 02:17:20] 2026-04-20 06:16:47,436 | INFO     | chi2: 0.002855591193233835
[2026-04-20 02:17:20] 2026-04-20 06:16:47,437 | INFO     | current chi2=0.002855591193233835 (change=34.82991649477854 %)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,437 | INFO     | sum of square deviations: 6953769450.5
[2026-04-20 02:17:20] 2026-04-20 06:16:47,440 | INFO     | sum of deviations: 9504156605.999998
[2026-04-20 02:17:20] 2026-04-20 06:16:47,440 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,441 | INFO     | mean y: 2329258.2624113476
[2026-04-20 02:17:20] 2026-04-20 06:16:47,441 | INFO     | intersect: 2329258.2624113476
[2026-04-20 02:17:20] 2026-04-20 06:16:47,441 | INFO     | chi2: 0.0023918508344567204
[2026-04-20 02:17:20] 2026-04-20 06:16:47,441 | INFO     | current chi2=0.0023918508344567204 (change=16.23973206934948 %)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,442 | INFO     | left removable region: 20
[2026-04-20 02:17:20] 2026-04-20 06:16:47,442 | INFO     | sum of square deviations: 6519285025.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,445 | INFO     | sum of deviations: 9071616189.500002
[2026-04-20 02:17:20] 2026-04-20 06:16:47,445 | INFO     | mean x (centered): 0.0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,445 | INFO     | mean y: 2329075.9311594204
[2026-04-20 02:17:20] 2026-04-20 06:16:47,445 | INFO     | intersect: 2329075.9311594204
[2026-04-20 02:17:20] 2026-04-20 06:16:47,446 | INFO     | chi2: 0.0023729003725905056
[2026-04-20 02:17:20] 2026-04-20 06:16:47,446 | INFO     | current memory leak: 1.39 B/s (using 276 data points, chi2=0.00)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,447 | INFO     | could have reported an average CPU frequency of 3090 MHz (14 samples)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,447 | INFO     | ..............................
[2026-04-20 02:17:20] 2026-04-20 06:16:47,447 | INFO     | . Timing measurements:
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . get job = 0 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . initial setup = 5 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . payload setup = 7 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . stage-in = 0 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . payload execution = 18418 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . stage-out = 2 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,448 | INFO     | . log creation = 0 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,449 | INFO     | ..............................
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | 
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | job summary report
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | --------------------------------------------------
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | PanDA job id: 7098006001
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | task id: 49545114
[2026-04-20 02:17:20] 2026-04-20 06:16:47,593 | INFO     | errors: (none)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | pilot state: finished 
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | transexitcode: 0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | exeerrorcode: 0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | exeerrordiag: 
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | exitcode: 0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | exitmsg: OK
[2026-04-20 02:17:20] 2026-04-20 06:16:47,594 | INFO     | cpuconsumptiontime: 71921 s
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | nevents: 400
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | neventsw: 0
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | pid: 884517
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | pgrp: 884517
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | corecount: 4
[2026-04-20 02:17:20] 2026-04-20 06:16:47,595 | INFO     | event service: False
[2026-04-20 02:17:20] 2026-04-20 06:16:47,596 | INFO     | sizes: {0: 2283445, 11: 2283445, 18429: 2315988, 18432: 2325070, 18433: 2325208}
[2026-04-20 02:17:20] 2026-04-20 06:16:47,596 | INFO     | --------------------------------------------------
[2026-04-20 02:17:20] 2026-04-20 06:16:47,596 | INFO     | 
[2026-04-20 02:17:20] 2026-04-20 06:16:47,596 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/4
[2026-04-20 02:17:20] 2026-04-20 06:16:47,627 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,628 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,628 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 02:17:20] 2026-04-20 06:16:47,631 | INFO     | job 7098006001 has completed (purged errors)
[2026-04-20 02:17:20] 2026-04-20 06:16:47,631 | INFO     | overall cleanup function is called
[2026-04-20 02:17:20] 2026-04-20 06:16:48,639 | INFO     | --- collectZombieJob: --- 10, [884517]
[2026-04-20 02:17:20] 2026-04-20 06:16:48,639 | INFO     | zombie collector waiting for pid 884517
[2026-04-20 02:17:20] 2026-04-20 06:16:48,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 02:17:20] 2026-04-20 06:16:48,639 | INFO     | collected zombie processes
[2026-04-20 02:17:20] 2026-04-20 06:16:48,639 | INFO     | will attempt to kill all subprocesses of pid=884517
[2026-04-20 02:17:20] 2026-04-20 06:16:49,024 | WARNING  | process 884517 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 02:17:20] 2026-04-20 06:16:49,167 | INFO     | process IDs to be killed: [884517] (in reverse order)
[2026-04-20 02:17:20] 2026-04-20 06:16:49,253 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 02:17:20] 2026-04-20 06:16:49,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 02:17:20] 2026-04-20 06:16:49,283 | INFO     | did not find any defunct processes belonging to 884517
[2026-04-20 02:17:20] 2026-04-20 06:16:49,311 | INFO     | did not find any defunct processes belonging to 884517
[2026-04-20 02:17:20] 2026-04-20 06:16:49,312 | INFO     | Ready for new job
[2026-04-20 02:17:20] 2026-04-20 06:16:49,314 | INFO     | **************************************
[2026-04-20 02:17:20] 2026-04-20 06:16:49,314 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 02:17:20] 2026-04-20 06:16:49,315 | INFO     | **************************************
[2026-04-20 02:17:20] 2026-04-20 06:16:49,315 | INFO     | 
[2026-04-20 02:17:20] 2026-04-20 06:16:49,317 | INFO     | architecture information:
[2026-04-20 02:17:20] 2026-04-20 06:16:49,317 | INFO     | executing command: cat /etc/os-release
[2026-04-20 02:17:20] 2026-04-20 06:16:49,335 | INFO     | cat /etc/os-release:
[2026-04-20 02:17:20] NAME="CentOS Linux"
[2026-04-20 02:17:20] VERSION="7 (Core)"
[2026-04-20 02:17:20] ID="centos"
[2026-04-20 02:17:20] ID_LIKE="rhel fedora"
[2026-04-20 02:17:20] VERSION_ID="7"
[2026-04-20 02:17:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 02:17:20] ANSI_COLOR="0;31"
[2026-04-20 02:17:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 02:17:20] HOME_URL="https://www.centos.org/"
[2026-04-20 02:17:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 02:17:20] 
[2026-04-20 02:17:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 02:17:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 02:17:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 02:17:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 02:17:20] 
[2026-04-20 02:17:20] 2026-04-20 06:16:49,336 | INFO     | **************************************
[2026-04-20 02:17:20] 2026-04-20 06:16:49,349 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 02:17:20] 2026-04-20 06:16:49,631 | INFO     | number of running child processes to parent process 884517: 1
[2026-04-20 02:17:20] 2026-04-20 06:16:49,632 | INFO     | maximum number of monitored processes: 6
[2026-04-20 02:17:20] 2026-04-20 06:16:49,633 | INFO     | aborting job monitoring since job object (job id=7098006001) has expired
[2026-04-20 02:17:20] 2026-04-20 06:16:49,839 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/4
[2026-04-20 02:17:20] 2026-04-20 06:16:49,858 | INFO     | sufficient remaining disk space (45634027520 B)
[2026-04-20 02:17:20] 2026-04-20 06:16:49,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 02:17:20] 2026-04-20 06:16:49,859 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 02:17:20] 2026-04-20 06:16:49,859 | INFO     | update_server=False
[2026-04-20 02:17:20] 2026-04-20 06:16:49,859 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 02:17:20] 2026-04-20 06:16:49,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 02:17:20] 2026-04-20 06:16:49,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 02:17:20] 2026-04-20 06:16:49,860 | INFO     | will abort loop
[2026-04-20 02:17:20] 2026-04-20 06:16:50,147 | INFO     | all payload control threads have been joined
[2026-04-20 02:17:20] 2026-04-20 06:16:50,447 | INFO     | all data control threads have been joined
[2026-04-20 02:17:20] 2026-04-20 06:16:50,859 | INFO     | all job control threads have been joined
[2026-04-20 02:17:20] 2026-04-20 06:16:50,863 | INFO     | [job] retrieve thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:50,865 | INFO     | [job] job monitor thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:50,955 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,152 | INFO     | [payload] control thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,205 | INFO     | [job] validate thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,452 | INFO     | [data] control thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,560 | INFO     | [payload] failed_post thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,749 | INFO     | [data] copytool_in thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,782 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,865 | INFO     | [job] control thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:51,865 | INFO     | [data] copytool_out thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:52,310 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:52,342 | INFO     | [payload] validate_post thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:52,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 02:17:20] 2026-04-20 06:16:52,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 02:17:20] 2026-04-20 06:16:52,885 | INFO     | [monitor] cgroup control has ended
[2026-04-20 02:17:20] 2026-04-20 06:16:53,609 | INFO     | [job] queue monitor thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:56,776 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 02:17:20] 2026-04-20 06:16:57,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138306083739456)>', '<ExcThread(monitor, started 138305454728960)>']
[2026-04-20 02:17:20] 2026-04-20 06:17:02,084 | INFO     | all workflow threads have been joined
[2026-04-20 02:17:20] 2026-04-20 06:17:02,084 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 02:17:20] 2026-04-20 06:17:02,084 | INFO     | traces error code: 0
[2026-04-20 02:17:20] 2026-04-20 06:17:02,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 02:17:20] 2026-04-20 06:17:20,383 | INFO     | PID=867095 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-20 02:17:20] 2026-04-20 06:17:20,383 | INFO     | .. there are 4 such processes running
[2026-04-20 02:17:20] 2026-04-20 06:17:20,383 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 02:17:20] 2026-04-20 06:17:20,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 02:17:20] 2026-04-20 06:17:20,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 02:17:20] 2026-04-20 06:17:20,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 02:17:20] 2026-04-20 06:17:20,384 | INFO     | [monitor] control thread has ended
[2026-04-20 02:17:20] 2026-04-20 06:17:20,509 [wrapper] ==== pilot stdout END ====
[2026-04-20 02:17:20] 2026-04-20 06:17:20,515 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 02:17:20] 2026-04-20 06:17:20,518 [wrapper] pilotpid: 867095
[2026-04-20 02:17:20] 2026-04-20 06:17:20,520 [wrapper] Pilot exit status: 0
[2026-04-20 02:17:20] 2026-04-20 06:17:20,530 [wrapper] pandaids: 7098006001
[2026-04-20 02:17:20] 2026-04-20 06:17:20,558 [wrapper] cleanup supervisor_pilot  934838 867097
[2026-04-20 02:17:20] 2026-04-20 06:17:20,563 [wrapper] Test setup, not cleaning
[2026-04-20 02:17:20] 2026-04-20 06:17:20,566 [wrapper] apfmon messages muted
[2026-04-20 02:17:20] 2026-04-20 06:17:20,569 [wrapper] ==== wrapper stdout END ====
[2026-04-20 02:17:20] 2026-04-20 06:17:20,571 [wrapper] ==== wrapper stderr END ====
[2026-04-20 02:17:20]  *** Error codes and diagnostics ***
[2026-04-20 02:17:20]     "exeErrorCode": 0,
[2026-04-20 02:17:20]     "pilotErrorCode": 0,
[2026-04-20 02:17:20]  *** Listing of results directory ***
[2026-04-20 02:17:20] total 456440
[2026-04-20 02:17:20] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-20 02:17:20] -rwx------ 1 whitlerd whitlerd     36322 Apr 18 05:22 runpilot2-wrapper.sh
[2026-04-20 02:17:20] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr 18 05:42 queuedata.json
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 19 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 02:17:20] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 19 21:09 run_atlas
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 19 21:09 job.xml
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd    656947 Apr 19 21:09 input.tar.gz
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd 281787445 Apr 19 21:09 EVNT.49539591._000518.pool.root.1
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 19 21:09 start_atlas.sh
[2026-04-20 02:17:20] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 19 21:09 shared
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd      8794 Apr 19 21:09 init_data.xml
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 19 21:09 boinc_setup_complete
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 19 21:09 boinc_lockfile
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd      2606 Apr 19 21:09 pandaJob.out
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd    997737 Apr 19 21:09 agis_schedconf.cvmfs.json
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd       426 Apr 19 21:09 workernode_map.json
[2026-04-20 02:17:20] drwx------ 5 whitlerd whitlerd      4096 Apr 19 21:09 pilot3
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd 177311452 Apr 20 02:16 HITS.49545114._030653.pool.root.1
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd       489 Apr 20 02:16 boinc_task_state.xml
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd      1035 Apr 20 02:16 memory_monitor_summary.json
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd        95 Apr 20 02:16 pilot_heartbeat.json
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd   1512404 Apr 20 02:16 agis_ddmendpoints.agis.ALL.json
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd    387136 Apr 20 02:16 log.49545114._030653.job.log.tgz.1
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd      6345 Apr 20 02:16 heartbeat_new.json
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd      6236 Apr 20 02:16 heartbeat.json
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 20 02:17 boinc_mmap_file
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd        28 Apr 20 02:17 wrapper_checkpoint.txt
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd       821 Apr 20 02:17 pilotlog.txt
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd   1731603 Apr 20 02:17 log.49545114._030653.job.log.1
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd       357 Apr 20 02:17 output.list
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 20 02:17 runtime_log
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd   2140160 Apr 20 02:17 result.tar.gz
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd      8607 Apr 20 02:17 runtime_log.err
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd       648 Apr 20 02:17 4d3e79b3750a.diag
[2026-04-20 02:17:20] -rw-rw-r-- 1 whitlerd whitlerd     21002 Apr 20 02:17 stderr.txt
[2026-04-20 02:17:20] HITS file was successfully produced:
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd 177311452 Apr 20 02:16 shared/HITS.pool.root.1
[2026-04-20 02:17:20]  *** Contents of shared directory: ***
[2026-04-20 02:17:20] total 451096
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd    656947 Apr 19 21:09 input.tar.gz
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd 281787445 Apr 19 21:09 ATLAS.root_0
[2026-04-20 02:17:20] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 19 21:09 start_atlas.sh
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd 177311452 Apr 20 02:16 HITS.pool.root.1
[2026-04-20 02:17:20] -rw------- 1 whitlerd whitlerd   2140160 Apr 20 02:17 result.tar.gz
02:17:21 (859814): run_atlas exited; CPU time 72541.887628
02:17:21 (859814): called boinc_finish(0)

</stderr_txt>
]]>

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