Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:41 (18202): wrapper (7.7.26015): starting
03:32:41 (18202): wrapper: running run_atlas (--nthreads 8)
[2026-04-20 03:32:41] Arguments: --nthreads 8
[2026-04-20 03:32:41] Threads: 8
[2026-04-20 03:32:41] Checking for CVMFS
[2026-04-20 03:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 03:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 03:32:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 03:32:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 03:32:44] 2.11.2.0 32757 6268 98648 158638 1 54 22423974 25165824 1027 130560 0 1635859 99.532 5210242 4775 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-20 03:32:44] CVMFS is ok
[2026-04-20 03:32:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 03:32:44] Checking for apptainer binary...
[2026-04-20 03:32:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 03:32:44] Running /usr/bin/apptainer --version
[2026-04-20 03:32:45] apptainer version 1.3.2-1.el7
[2026-04-20 03:32:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 03:33:01] cg-vwn430.simple-grid.lan
[2026-04-20 03:33:01] apptainer works
[2026-04-20 03:33:01] Set ATHENA_PROC_NUMBER=8
[2026-04-20 03:33:01] Set ATHENA_CORE_NUMBER=8
[2026-04-20 03:33:01] Starting ATLAS job with PandaID=7098075788
[2026-04-20 03:33:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 06:36:59]  *** The last 200 lines of the pilot log: ***
[2026-04-20 06:36:59] 2026-04-20 04:35:48,541 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,542 | INFO     | log transfer has been attempted: DONE
[2026-04-20 06:36:59] 2026-04-20 04:35:48,542 | INFO     | job 7098075788 has finished - writing final server update
[2026-04-20 06:36:59] 2026-04-20 04:35:48,542 | INFO     | total number of processed events: 400 (read)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,544 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7098075788/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,545 | INFO     | extracted standard info from prmon json
[2026-04-20 06:36:59] 2026-04-20 04:35:48,545 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 06:36:59] 2026-04-20 04:35:48,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 06:36:59] 2026-04-20 04:35:48,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 06:36:59] 2026-04-20 04:35:48,549 | INFO     | fitting pss+swap vs Time
[2026-04-20 06:36:59] 2026-04-20 04:35:48,550 | INFO     | sum of square deviations: 1444149868.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,551 | INFO     | sum of deviations: 92772450606.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,551 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,551 | INFO     | mean y: 2390794.502994012
[2026-04-20 06:36:59] 2026-04-20 04:35:48,551 | INFO     | intersect: 2390794.502994012
[2026-04-20 06:36:59] 2026-04-20 04:35:48,551 | INFO     | chi2: 9.078826446394135
[2026-04-20 06:36:59] 2026-04-20 04:35:48,552 | INFO     | sum of square deviations: 1318277740.5
[2026-04-20 06:36:59] 2026-04-20 04:35:48,553 | INFO     | sum of deviations: 100759721035.5
[2026-04-20 06:36:59] 2026-04-20 04:35:48,553 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,553 | INFO     | mean y: 2400142.3024691357
[2026-04-20 06:36:59] 2026-04-20 04:35:48,553 | INFO     | intersect: 2400142.3024691357
[2026-04-20 06:36:59] 2026-04-20 04:35:48,554 | INFO     | chi2: 8.414405310642167
[2026-04-20 06:36:59] 2026-04-20 04:35:48,554 | INFO     | current chi2=8.414405310642167 (change=7.318359257939762 %)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,554 | INFO     | right removable region: 161
[2026-04-20 06:36:59] 2026-04-20 04:35:48,554 | INFO     | sum of square deviations: 1318277740.5
[2026-04-20 06:36:59] 2026-04-20 04:35:48,555 | INFO     | sum of deviations: 34768983984.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,556 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,556 | INFO     | mean y: 2461023.4691358022
[2026-04-20 06:36:59] 2026-04-20 04:35:48,556 | INFO     | intersect: 2461023.4691358022
[2026-04-20 06:36:59] 2026-04-20 04:35:48,556 | INFO     | chi2: 3.637373022276583
[2026-04-20 06:36:59] 2026-04-20 04:35:48,556 | INFO     | current chi2=3.637373022276583 (change=59.935647588887996 %)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,557 | INFO     | sum of square deviations: 1199940638.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,558 | INFO     | sum of deviations: -8462923694.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,558 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,558 | INFO     | mean y: 2516614.872611465
[2026-04-20 06:36:59] 2026-04-20 04:35:48,558 | INFO     | intersect: 2516614.872611465
[2026-04-20 06:36:59] 2026-04-20 04:35:48,559 | INFO     | chi2: 0.9163758371370454
[2026-04-20 06:36:59] 2026-04-20 04:35:48,559 | INFO     | current chi2=0.9163758371370454 (change=74.80665767506302 %)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,559 | INFO     | sum of square deviations: 1088905998.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,560 | INFO     | sum of deviations: -12643054285.000002
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | mean y: 2522215.6710526315
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | intersect: 2522215.6710526315
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | chi2: 0.8411361947536459
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | current chi2=0.8411361947536459 (change=8.210565941858999 %)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,561 | INFO     | left removable region: 15
[2026-04-20 06:36:59] 2026-04-20 04:35:48,562 | INFO     | sum of square deviations: 964976232.5
[2026-04-20 06:36:59] 2026-04-20 04:35:48,563 | INFO     | sum of deviations: -2299032232.9999986
[2026-04-20 06:36:59] 2026-04-20 04:35:48,563 | INFO     | mean x (centered): 0.0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,563 | INFO     | mean y: 2536992.3561643837
[2026-04-20 06:36:59] 2026-04-20 04:35:48,563 | INFO     | intersect: 2536992.3561643837
[2026-04-20 06:36:59] 2026-04-20 04:35:48,563 | INFO     | chi2: 0.041890587503222124
[2026-04-20 06:36:59] 2026-04-20 04:35:48,564 | INFO     | current memory leak: -2.38 B/s (using 146 data points, chi2=0.04)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,564 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,564 | INFO     | ..............................
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . Timing measurements:
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . get job = 0 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . initial setup = 120 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . payload setup = 264 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . stage-in = 0 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . payload execution = 10288 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . stage-out = 3 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | . log creation = 1 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,565 | INFO     | ..............................
[2026-04-20 06:36:59] 2026-04-20 04:35:48,693 | INFO     | 
[2026-04-20 06:36:59] 2026-04-20 04:35:48,693 | INFO     | job summary report
[2026-04-20 06:36:59] 2026-04-20 04:35:48,693 | INFO     | --------------------------------------------------
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | PanDA job id: 7098075788
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | task id: 49545114
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | errors: (none)
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | pilot state: finished 
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | transexitcode: 0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | exeerrorcode: 0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | exeerrordiag: 
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | exitcode: 0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,694 | INFO     | exitmsg: OK
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | cpuconsumptiontime: 49319 s
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | nevents: 400
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | neventsw: 0
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | pid: 26628
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | pgrp: 26628
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | corecount: 8
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | event service: False
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | sizes: {0: 2280973, 1: 2281658, 2: 2283487, 12: 2283487, 10557: 2312221, 10561: 2321219, 10563: 2321403, 10566: 2321661}
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | --------------------------------------------------
[2026-04-20 06:36:59] 2026-04-20 04:35:48,695 | INFO     | 
[2026-04-20 06:36:59] 2026-04-20 04:35:48,696 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-20 06:36:59] 2026-04-20 04:35:49,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 06:36:59] 2026-04-20 04:35:49,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,171 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 06:36:59] 2026-04-20 04:35:49,171 | INFO     | job 7098075788 has completed (purged errors)
[2026-04-20 06:36:59] 2026-04-20 04:35:49,171 | INFO     | overall cleanup function is called
[2026-04-20 06:36:59] 2026-04-20 04:35:50,179 | INFO     | --- collectZombieJob: --- 10, [26628]
[2026-04-20 06:36:59] 2026-04-20 04:35:50,180 | INFO     | zombie collector waiting for pid 26628
[2026-04-20 06:36:59] 2026-04-20 04:35:50,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 06:36:59] 2026-04-20 04:35:50,180 | INFO     | collected zombie processes
[2026-04-20 06:36:59] 2026-04-20 04:35:50,180 | INFO     | will attempt to kill all subprocesses of pid=26628
[2026-04-20 06:36:59] 2026-04-20 04:35:50,263 | INFO     | process IDs to be killed: [26628] (in reverse order)
[2026-04-20 06:36:59] 2026-04-20 04:35:51,110 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 06:36:59] 2026-04-20 04:35:51,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 06:36:59] 2026-04-20 04:35:51,112 | INFO     | did not find any defunct processes belonging to 26628
[2026-04-20 06:36:59] 2026-04-20 04:35:51,114 | INFO     | did not find any defunct processes belonging to 26628
[2026-04-20 06:36:59] 2026-04-20 04:35:51,114 | INFO     | Ready for new job
[2026-04-20 06:36:59] 2026-04-20 04:35:51,116 | INFO     | **************************************
[2026-04-20 06:36:59] 2026-04-20 04:35:51,116 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 06:36:59] 2026-04-20 04:35:51,116 | INFO     | **************************************
[2026-04-20 06:36:59] 2026-04-20 04:35:51,116 | INFO     | 
[2026-04-20 06:36:59] 2026-04-20 04:35:51,116 | INFO     | pilot is running in a VM
[2026-04-20 06:36:59] 2026-04-20 04:35:51,117 | INFO     | architecture information:
[2026-04-20 06:36:59] 2026-04-20 04:35:51,117 | INFO     | executing command: cat /etc/os-release
[2026-04-20 06:36:59] 2026-04-20 04:35:51,414 | INFO     | cat /etc/os-release:
[2026-04-20 06:36:59] NAME="CentOS Linux"
[2026-04-20 06:36:59] VERSION="7 (Core)"
[2026-04-20 06:36:59] ID="centos"
[2026-04-20 06:36:59] ID_LIKE="rhel fedora"
[2026-04-20 06:36:59] VERSION_ID="7"
[2026-04-20 06:36:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 06:36:59] ANSI_COLOR="0;31"
[2026-04-20 06:36:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 06:36:59] HOME_URL="https://www.centos.org/"
[2026-04-20 06:36:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 06:36:59] 
[2026-04-20 06:36:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 06:36:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 06:36:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 06:36:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 06:36:59] 
[2026-04-20 06:36:59] 2026-04-20 04:35:51,414 | INFO     | **************************************
[2026-04-20 06:36:59] 2026-04-20 04:35:51,918 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-20 06:36:59] 2026-04-20 04:35:52,195 | INFO     | sufficient remaining disk space (497850253312 B)
[2026-04-20 06:36:59] 2026-04-20 04:35:52,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 06:36:59] 2026-04-20 04:35:52,196 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 06:36:59] 2026-04-20 04:35:52,196 | INFO     | update_server=False
[2026-04-20 06:36:59] 2026-04-20 04:35:52,196 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 06:36:59] 2026-04-20 04:35:52,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 06:36:59] 2026-04-20 04:35:52,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 06:36:59] 2026-04-20 04:35:52,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 06:36:59] 2026-04-20 04:35:52,373 | INFO     | aborting loop
[2026-04-20 06:36:59] 2026-04-20 04:35:53,054 | INFO     | all data control threads have been joined
[2026-04-20 06:36:59] 2026-04-20 04:35:53,202 | INFO     | [job] retrieve thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:53,379 | INFO     | [job] job monitor thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:53,415 | INFO     | all job control threads have been joined
[2026-04-20 06:36:59] 2026-04-20 04:35:53,447 | INFO     | all payload control threads have been joined
[2026-04-20 06:36:59] 2026-04-20 04:35:53,665 | INFO     | [job] validate thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:53,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 06:36:59] 2026-04-20 04:35:53,899 | INFO     | [payload] validate_post thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:53,981 | INFO     | [payload] failed_post thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,004 | INFO     | [data] copytool_in thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,061 | INFO     | [data] control thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,101 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,200 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,206 | INFO     | [data] copytool_out thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,358 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,422 | INFO     | [job] control thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,454 | INFO     | [payload] control thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:54,717 | INFO     | [job] queue monitor thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:35:56,206 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:36:02,598 | INFO     | job.realtimelogging is not enabled
[2026-04-20 06:36:59] 2026-04-20 04:36:03,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 06:36:59] 2026-04-20 04:36:21,462 | INFO     | PID=22170 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-20 06:36:59] 2026-04-20 04:36:21,462 | INFO     | .. there are 2 such processes running
[2026-04-20 06:36:59] 2026-04-20 04:36:21,463 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 06:36:59] 2026-04-20 04:36:21,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 06:36:59] 2026-04-20 04:36:21,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 06:36:59] 2026-04-20 04:36:47,661 | INFO     | [monitor] cgroup control has ended
[2026-04-20 06:36:59] 2026-04-20 04:36:49,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453736691520)>', '<ExcThread(monitor, started 140453005485824)>']
[2026-04-20 06:36:59] 2026-04-20 04:36:49,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 06:36:59] 2026-04-20 04:36:49,631 | INFO     | [monitor] control thread has ended
[2026-04-20 06:36:59] 2026-04-20 04:36:54,422 | INFO     | all workflow threads have been joined
[2026-04-20 06:36:59] 2026-04-20 04:36:54,423 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 06:36:59] 2026-04-20 04:36:54,423 | INFO     | traces error code: 0
[2026-04-20 06:36:59] 2026-04-20 04:36:54,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 06:36:59] 2026-04-20 04:36:54,815 [wrapper] ==== pilot stdout END ====
[2026-04-20 06:36:59] 2026-04-20 04:36:54,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 06:36:59] 2026-04-20 04:36:54,960 [wrapper] pilotpid: 22170
[2026-04-20 06:36:59] 2026-04-20 04:36:55,024 [wrapper] Pilot exit status: 0
[2026-04-20 06:36:59] 2026-04-20 04:36:55,152 [wrapper] pandaids: 7098075788
[2026-04-20 06:36:59] 2026-04-20 04:36:56,265 [wrapper] cleanup supervisor_pilot 15083 22171
[2026-04-20 06:36:59] 2026-04-20 04:36:56,379 [wrapper] Test setup, not cleaning
[2026-04-20 06:36:59] 2026-04-20 04:36:56,469 [wrapper] apfmon messages muted
[2026-04-20 06:36:59] 2026-04-20 04:36:56,549 [wrapper] ==== wrapper stdout END ====
[2026-04-20 06:36:59] 2026-04-20 04:36:56,577 [wrapper] ==== wrapper stderr END ====
[2026-04-20 06:36:59]  *** Error codes and diagnostics ***
[2026-04-20 06:36:59]     "exeErrorCode": 0,
[2026-04-20 06:36:59]     "pilotErrorCode": 0,
[2026-04-20 06:36:59]  *** Listing of results directory ***
[2026-04-20 06:36:59] total 470192
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-20 06:36:59] -rwx------. 1 boinc boinc     36322 Apr 18 11:22 runpilot2-wrapper.sh
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:42 queuedata.json
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc       100 Apr 20 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 06:36:59] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 03:32 run_atlas
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc       105 Apr 20 03:32 job.xml
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc      6306 Apr 20 03:32 init_data.xml
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc 284558486 Apr 20 03:32 EVNT.49539591._000496.pool.root.1
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc     15665 Apr 20 03:32 start_atlas.sh
[2026-04-20 06:36:59] drwxrwx--x. 2 boinc boinc        68 Apr 20 03:32 shared
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc    656946 Apr 20 03:32 input.tar.gz
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc         0 Apr 20 03:32 boinc_lockfile
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc      2606 Apr 20 03:33 pandaJob.out
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc   1512404 Apr 20 03:37 agis_ddmendpoints.agis.ALL.json
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc       415 Apr 20 03:39 workernode_map.json
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc    997737 Apr 20 03:39 agis_schedconf.cvmfs.json
[2026-04-20 06:36:59] drwx------. 5 boinc boinc      4096 Apr 20 03:39 pilot3
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc 190179122 Apr 20 06:34 HITS.49545114._030888.pool.root.1
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc       488 Apr 20 06:34 boinc_task_state.xml
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc      1022 Apr 20 06:35 memory_monitor_summary.json
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc    350883 Apr 20 06:35 log.49545114._030888.job.log.tgz.1
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc      6341 Apr 20 06:35 heartbeat_new.json
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc      6232 Apr 20 06:35 heartbeat.json
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc        95 Apr 20 06:36 pilot_heartbeat.json
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc      8192 Apr 20 06:36 boinc_mmap_file
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc        28 Apr 20 06:36 wrapper_checkpoint.txt
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc      4951 Apr 20 06:36 pilotlog.txt
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc    997750 Apr 20 06:36 log.49545114._030888.job.log.1
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc       357 Apr 20 06:36 output.list
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc       410 Apr 20 06:36 runtime_log
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc   1361920 Apr 20 06:36 result.tar.gz
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc      8438 Apr 20 06:36 runtime_log.err
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc       655 Apr 20 06:36 4d6e96d069c2.diag
[2026-04-20 06:36:59] -rw-r--r--. 1 boinc boinc     20619 Apr 20 06:36 stderr.txt
[2026-04-20 06:36:59] HITS file was successfully produced:
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc 190179122 Apr 20 06:34 shared/HITS.pool.root.1
[2026-04-20 06:36:59]  *** Contents of shared directory: ***
[2026-04-20 06:36:59] total 465608
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc 284558486 Apr 20 03:32 ATLAS.root_0
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc     15665 Apr 20 03:32 start_atlas.sh
[2026-04-20 06:36:59] -rw-r--r--. 2 boinc boinc    656946 Apr 20 03:32 input.tar.gz
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc 190179122 Apr 20 06:34 HITS.pool.root.1
[2026-04-20 06:36:59] -rw-------. 1 boinc boinc   1361920 Apr 20 06:36 result.tar.gz
06:37:01 (18202): run_atlas exited; CPU time 49403.804067
06:37:01 (18202): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN