Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:56 (3460390): wrapper (7.7.26015): starting
16:54:56 (3460390): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 16:54:56] Arguments: --nthreads 8
[2026-04-19 16:54:56] Threads: 8
[2026-04-19 16:54:56] Checking for CVMFS
[2026-04-19 16:54:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 16:54:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 16:54:56] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 16:54:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 16:54:57] 2.13.3.0 7554 167385 201364 158631 1 562 33858480 40960001 30092 16776704 0 508088178 99.714 418022790 37699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-19 16:54:57] CVMFS is ok
[2026-04-19 16:54:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 16:54:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 16:54:57] Further information can be found at the LHC@home message board.
[2026-04-19 16:54:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 16:54:57] Checking for apptainer binary...
[2026-04-19 16:54:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 16:54:57] Running /usr/bin/apptainer --version
[2026-04-19 16:54:57] apptainer version 1.4.5-2.el9
[2026-04-19 16:54:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 16:54:57] c-212-7.aglt2.org
[2026-04-19 16:54:57] apptainer works
[2026-04-19 16:54:57] Set ATHENA_PROC_NUMBER=8
[2026-04-19 16:54:57] Set ATHENA_CORE_NUMBER=8
[2026-04-19 16:54:57] Starting ATLAS job with PandaID=7090987429
[2026-04-19 16:54:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 19:53:01]  *** The last 200 lines of the pilot log: ***
[2026-04-19 19:53:01] 2026-04-19 23:52:21,320 | INFO     | .. there are 19 such processes running
[2026-04-19 19:53:01] 2026-04-19 23:52:21,824 | INFO     | job 7090987429 has state=finished
[2026-04-19 19:53:01] 2026-04-19 23:52:21,824 | INFO     | preparing for final server update for job 7090987429 in state='finished'
[2026-04-19 19:53:01] 2026-04-19 23:52:21,824 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7090987429/jobReport.json
[2026-04-19 19:53:01] 2026-04-19 23:52:21,827 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-19 19:53:01] 2026-04-19 23:52:21,827 | INFO     | this job has now completed (state=finished)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,827 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,827 | INFO     | log transfer has been attempted: DONE
[2026-04-19 19:53:01] 2026-04-19 23:52:21,827 | INFO     | job 7090987429 has finished - writing final server update
[2026-04-19 19:53:01] 2026-04-19 23:52:21,828 | INFO     | total number of processed events: 400 (read)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,843 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7090987429/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,843 | INFO     | extracted standard info from prmon json
[2026-04-19 19:53:01] 2026-04-19 23:52:21,844 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 19:53:01] 2026-04-19 23:52:21,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 19:53:01] 2026-04-19 23:52:21,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 19:53:01] 2026-04-19 23:52:21,847 | INFO     | fitting pss+swap vs Time
[2026-04-19 19:53:01] 2026-04-19 23:52:21,847 | INFO     | sum of square deviations: 1605460587.9768791
[2026-04-19 19:53:01] 2026-04-19 23:52:21,848 | INFO     | sum of deviations: 27816747638.046257
[2026-04-19 19:53:01] 2026-04-19 23:52:21,848 | INFO     | mean x (centered): 0.0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,848 | INFO     | mean y: 2488380.976878613
[2026-04-19 19:53:01] 2026-04-19 23:52:21,848 | INFO     | intersect: 2488380.976878613
[2026-04-19 19:53:01] 2026-04-19 23:52:21,849 | INFO     | chi2: 2.4606281238208414
[2026-04-19 19:53:01] 2026-04-19 23:52:21,849 | INFO     | sum of square deviations: 1470240057.9761908
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | sum of deviations: 26932881927.22619
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | mean x (centered): 0.0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | mean y: 2487384.136904762
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | intersect: 2487384.136904762
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | chi2: 2.464077077991963
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | current chi2=2.464077077991963 (change=-0.14016559990244615 %)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,850 | INFO     | right removable region: 167
[2026-04-19 19:53:01] 2026-04-19 23:52:21,851 | INFO     | sum of square deviations: 1470238837.9761908
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | sum of deviations: -10003564160.095238
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | mean x (centered): 0.0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | mean y: 2530698.0476190476
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | intersect: 2530698.0476190476
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | chi2: 0.25016892449723366
[2026-04-19 19:53:01] 2026-04-19 23:52:21,852 | INFO     | current chi2=0.25016892449723366 (change=89.83312748174342 %)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,853 | INFO     | sum of square deviations: 1342831187.97546
[2026-04-19 19:53:01] 2026-04-19 23:52:21,853 | INFO     | sum of deviations: -14230262093.349695
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | mean x (centered): 0.0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | mean y: 2535701.674846626
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | intersect: 2535701.674846626
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | chi2: 0.20431648058784896
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | current chi2=0.20431648058784896 (change=18.32859297034382 %)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | left removable region: 10
[2026-04-19 19:53:01] 2026-04-19 23:52:21,854 | INFO     | sum of square deviations: 1199930635.9745193
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | sum of deviations: -13816371810.585989
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | mean x (centered): 0.0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | mean y: 2536232.2929936307
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | intersect: 2536232.2929936307
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | chi2: 0.20264149868378528
[2026-04-19 19:53:01] 2026-04-19 23:52:21,855 | INFO     | current memory leak: -11.51 B/s (using 157 data points, chi2=0.20)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | could have reported an average CPU frequency of 3034 MHz (9 samples)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | ..............................
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | . Timing measurements:
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | . get job = 0 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | . initial setup = 16 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | . payload setup = 23 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,856 | INFO     | . stage-in = 0 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,857 | INFO     | . payload execution = 10559 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,857 | INFO     | . stage-out = 0 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,857 | INFO     | . log creation = 0 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,857 | INFO     | ..............................
[2026-04-19 19:53:01] 2026-04-19 23:52:21,936 | INFO     | 
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | job summary report
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | --------------------------------------------------
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | PanDA job id: 7090987429
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | task id: 49263191
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | errors: (none)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | pilot state: finished 
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | transexitcode: 0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | exeerrorcode: 0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | exeerrordiag: 
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | exitcode: 0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | exitmsg: OK
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | cpuconsumptiontime: 34744 s
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | nevents: 400
[2026-04-19 19:53:01] 2026-04-19 23:52:21,937 | INFO     | neventsw: 0
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | pid: 3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | pgrp: 3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | corecount: 8
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | event service: False
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | sizes: {0: 2281591, 1: 2283420, 12: 2283420, 10585: 2312419, 10586: 2312418, 10588: 2321472, 10590: 2321656, 10591: 2321914}
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | --------------------------------------------------
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | 
[2026-04-19 19:53:01] 2026-04-19 23:52:21,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 19:53:01] 2026-04-19 23:52:21,962 | INFO     | job 7090987429 has completed (purged errors)
[2026-04-19 19:53:01] 2026-04-19 23:52:21,962 | INFO     | overall cleanup function is called
[2026-04-19 19:53:01] 2026-04-19 23:52:22,970 | INFO     | --- collectZombieJob: --- 10, [3470499]
[2026-04-19 19:53:01] 2026-04-19 23:52:22,970 | INFO     | zombie collector waiting for pid 3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:22,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 19:53:01] 2026-04-19 23:52:22,971 | INFO     | collected zombie processes
[2026-04-19 19:53:01] 2026-04-19 23:52:22,971 | INFO     | will attempt to kill all subprocesses of pid=3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:23,385 | INFO     | process IDs to be killed: [3470499] (in reverse order)
[2026-04-19 19:53:01] 2026-04-19 23:52:23,529 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 19:53:01] 2026-04-19 23:52:23,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 19:53:01] 2026-04-19 23:52:23,546 | INFO     | did not find any defunct processes belonging to 3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:23,564 | INFO     | did not find any defunct processes belonging to 3470499
[2026-04-19 19:53:01] 2026-04-19 23:52:23,564 | INFO     | Ready for new job
[2026-04-19 19:53:01] 2026-04-19 23:52:23,566 | INFO     | **************************************
[2026-04-19 19:53:01] 2026-04-19 23:52:23,566 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 19:53:01] 2026-04-19 23:52:23,566 | INFO     | **************************************
[2026-04-19 19:53:01] 2026-04-19 23:52:23,566 | INFO     | 
[2026-04-19 19:53:01] 2026-04-19 23:52:23,572 | INFO     | architecture information:
[2026-04-19 19:53:01] 2026-04-19 23:52:23,572 | INFO     | executing command: cat /etc/os-release
[2026-04-19 19:53:01] 2026-04-19 23:52:23,593 | INFO     | cat /etc/os-release:
[2026-04-19 19:53:01] NAME="CentOS Linux"
[2026-04-19 19:53:01] VERSION="7 (Core)"
[2026-04-19 19:53:01] ID="centos"
[2026-04-19 19:53:01] ID_LIKE="rhel fedora"
[2026-04-19 19:53:01] VERSION_ID="7"
[2026-04-19 19:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 19:53:01] ANSI_COLOR="0;31"
[2026-04-19 19:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 19:53:01] HOME_URL="https://www.centos.org/"
[2026-04-19 19:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 19:53:01] 
[2026-04-19 19:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 19:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 19:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 19:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 19:53:01] 
[2026-04-19 19:53:01] 2026-04-19 23:52:23,593 | INFO     | **************************************
[2026-04-19 19:53:01] 2026-04-19 23:52:24,097 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-19 19:53:01] 2026-04-19 23:52:24,118 | INFO     | sufficient remaining disk space (129787494400 B)
[2026-04-19 19:53:01] 2026-04-19 23:52:24,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 19:53:01] 2026-04-19 23:52:24,119 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 19:53:01] 2026-04-19 23:52:24,119 | INFO     | update_server=False
[2026-04-19 19:53:01] 2026-04-19 23:52:24,119 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 19:53:01] 2026-04-19 23:52:24,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 19:53:01] 2026-04-19 23:52:24,497 | INFO     | all data control threads have been joined
[2026-04-19 19:53:01] 2026-04-19 23:52:24,552 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-19 19:53:01] 2026-04-19 23:52:24,552 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-19 19:53:01] 2026-04-19 23:52:24,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 19:53:01] 2026-04-19 23:52:24,553 | INFO     | will abort loop
[2026-04-19 19:53:01] 2026-04-19 23:52:25,125 | INFO     | [job] retrieve thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,131 | INFO     | [payload] failed_post thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,224 | INFO     | [data] copytool_in thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,376 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,470 | INFO     | all payload control threads have been joined
[2026-04-19 19:53:01] 2026-04-19 23:52:25,502 | INFO     | [data] control thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,558 | INFO     | [job] job monitor thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,660 | INFO     | all job control threads have been joined
[2026-04-19 19:53:01] 2026-04-19 23:52:25,818 | INFO     | [payload] validate_post thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:25,897 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,007 | INFO     | [job] validate thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,125 | INFO     | [data] copytool_out thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,248 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 19:53:01] 2026-04-19 23:52:26,476 | INFO     | [payload] control thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,665 | INFO     | [job] control thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:26,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 19:53:01] 2026-04-19 23:52:27,955 | INFO     | [job] queue monitor thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:30,346 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:34,835 | INFO     | job.realtimelogging is not enabled
[2026-04-19 19:53:01] 2026-04-19 23:52:35,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 19:53:01] 2026-04-19 23:52:53,929 | INFO     | PID=3464336 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 19:53:01] 2026-04-19 23:52:53,929 | INFO     | .. there are 19 such processes running
[2026-04-19 19:53:01] 2026-04-19 23:52:53,930 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 19:53:01] 2026-04-19 23:52:53,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 19:53:01] 2026-04-19 23:52:53,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 19:53:01] 2026-04-19 23:52:55,103 | INFO     | [monitor] cgroup control has ended
[2026-04-19 19:53:01] 2026-04-19 23:52:56,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725250025280)>', '<ExcThread(monitor, started 139724967917312)>']
[2026-04-19 19:53:01] 2026-04-19 23:52:56,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 19:53:01] 2026-04-19 23:52:56,946 | INFO     | [monitor] control thread has ended
[2026-04-19 19:53:01] 2026-04-19 23:53:01,365 | INFO     | all workflow threads have been joined
[2026-04-19 19:53:01] 2026-04-19 23:53:01,365 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 19:53:01] 2026-04-19 23:53:01,366 | INFO     | traces error code: 0
[2026-04-19 19:53:01] 2026-04-19 23:53:01,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 19:53:01] 2026-04-19 23:53:01,482 [wrapper] ==== pilot stdout END ====
[2026-04-19 19:53:01] 2026-04-19 23:53:01,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 19:53:01] 2026-04-19 23:53:01,490 [wrapper] pilotpid: 3464336
[2026-04-19 19:53:01] 2026-04-19 23:53:01,494 [wrapper] Pilot exit status: 0
[2026-04-19 19:53:01] 2026-04-19 23:53:01,514 [wrapper] pandaids: 7090987429
[2026-04-19 19:53:01] 2026-04-19 23:53:01,626 [wrapper] cleanup supervisor_pilot 3970889 3464337
[2026-04-19 19:53:01] 2026-04-19 23:53:01,629 [wrapper] Test setup, not cleaning
[2026-04-19 19:53:01] 2026-04-19 23:53:01,632 [wrapper] apfmon messages muted
[2026-04-19 19:53:01] 2026-04-19 23:53:01,634 [wrapper] ==== wrapper stdout END ====
[2026-04-19 19:53:01] 2026-04-19 23:53:01,637 [wrapper] ==== wrapper stderr END ====
[2026-04-19 19:53:01]  *** Error codes and diagnostics ***
[2026-04-19 19:53:01]     "exeErrorCode": 0,
[2026-04-19 19:53:01]     "pilotErrorCode": 0,
[2026-04-19 19:53:01]  *** Listing of results directory ***
[2026-04-19 19:53:01] total 414304
[2026-04-19 19:53:01] -rwx------. 1 boincer umatlas     36322 Apr 18 10:18 runpilot2-wrapper.sh
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 10:36 pilot3.tar.gz
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 10:39 queuedata.json
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas       100 Apr 19 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 19:53:01] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 16:54 run_atlas
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas       105 Apr 19 16:54 job.xml
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas 222034570 Apr 19 16:54 EVNT.49263189._001508.pool.root.1
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 16:54 start_atlas.sh
[2026-04-19 19:53:01] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 16:54 shared
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas    656934 Apr 19 16:54 input.tar.gz
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas         0 Apr 19 16:54 boinc_lockfile
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 16:54 pandaJob.out
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas        57 Apr 19 16:54 setup.sh.local
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas    997729 Apr 19 16:55 agis_schedconf.cvmfs.json
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas   1512404 Apr 19 16:55 agis_ddmendpoints.agis.ALL.json
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas       429 Apr 19 16:55 workernode_map.json
[2026-04-19 19:53:01] drwx------. 5 boincer umatlas      4096 Apr 19 16:55 pilot3
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas      6873 Apr 19 19:49 init_data.xml
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas 195466990 Apr 19 19:51 HITS.49263191._072464.pool.root.1
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas       488 Apr 19 19:51 boinc_task_state.xml
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas      1048 Apr 19 19:52 memory_monitor_summary.json
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas    367517 Apr 19 19:52 log.49263191._072464.job.log.tgz.1
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas      6391 Apr 19 19:52 heartbeat_new.json
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas      6282 Apr 19 19:52 heartbeat.json
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas        95 Apr 19 19:52 pilot_heartbeat.json
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas        28 Apr 19 19:52 wrapper_checkpoint.txt
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 19:52 boinc_mmap_file
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas      5078 Apr 19 19:53 pilotlog.txt
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas    974554 Apr 19 19:53 log.49263191._072464.job.log.1
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas       357 Apr 19 19:53 output.list
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas       410 Apr 19 19:53 runtime_log
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas   1361920 Apr 19 19:53 result.tar.gz
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas      8959 Apr 19 19:53 runtime_log.err
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas       659 Apr 19 19:53 929d71bd7a46.diag
[2026-04-19 19:53:01] -rw-r--r--. 1 boincer umatlas     21204 Apr 19 19:53 stderr.txt
[2026-04-19 19:53:01] HITS file was successfully produced:
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas 195466990 Apr 19 19:51 shared/HITS.pool.root.1
[2026-04-19 19:53:01]  *** Contents of shared directory: ***
[2026-04-19 19:53:01] total 409716
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas 222034570 Apr 19 16:54 ATLAS.root_0
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 16:54 start_atlas.sh
[2026-04-19 19:53:01] -rw-r--r--. 2 boincer umatlas    656934 Apr 19 16:54 input.tar.gz
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas 195466990 Apr 19 19:51 HITS.pool.root.1
[2026-04-19 19:53:01] -rw-------. 1 boincer umatlas   1361920 Apr 19 19:53 result.tar.gz
19:53:03 (3460390): run_atlas exited; CPU time 35082.760831
19:53:03 (3460390): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN