Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:59 (3234536): wrapper (7.7.26015): starting
16:54:59 (3234536): wrapper: running run_atlas (--nthreads 9)
[2026-04-19 16:54:59] Arguments: --nthreads 9
[2026-04-19 16:54:59] Threads: 9
[2026-04-19 16:54:59] Checking for CVMFS
[2026-04-19 16:54:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 16:54:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 16:54:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 16:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 16:54:59] 2.13.3.0 9943 165270 137588 158631 1 66 33564890 39288833 9861 16776704 0 204526278 99.565 312841654 34491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-19 16:54:59] CVMFS is ok
[2026-04-19 16:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 16:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 16:54:59] Further information can be found at the LHC@home message board.
[2026-04-19 16:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 16:54:59] Checking for apptainer binary...
[2026-04-19 16:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 16:54:59] Running /usr/bin/apptainer --version
[2026-04-19 16:54:59] apptainer version 1.4.5-2.el9
[2026-04-19 16:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 16:55:00] c-210-6.aglt2.org
[2026-04-19 16:55:00] apptainer works
[2026-04-19 16:55:00] Set ATHENA_PROC_NUMBER=9
[2026-04-19 16:55:00] Set ATHENA_CORE_NUMBER=9
[2026-04-19 16:55:00] Starting ATLAS job with PandaID=7087159280
[2026-04-19 16:55:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:32:14 (3779036): wrapper (7.7.26015): starting
21:32:14 (3779036): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 21:32:14] Arguments: --nthreads 8
[2026-04-19 21:32:14] Threads: 8
[2026-04-19 21:32:14] This job has been restarted, cleaning up previous attempt
[2026-04-19 21:32:14] Checking for CVMFS
[2026-04-19 21:32:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 21:32:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 21:32:15] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 21:32:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 21:32:15] 2.13.3.0 9943 165547 138220 158638 0 352 34513208 39288833 14521 16776704 0 205001448 99.565 312853442 34491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-19 21:32:15] CVMFS is ok
[2026-04-19 21:32:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 21:32:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 21:32:15] Further information can be found at the LHC@home message board.
[2026-04-19 21:32:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 21:32:15] Checking for apptainer binary...
[2026-04-19 21:32:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 21:32:15] Running /usr/bin/apptainer --version
[2026-04-19 21:32:15] apptainer version 1.4.5-2.el9
[2026-04-19 21:32:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 21:32:15] c-210-6.aglt2.org
[2026-04-19 21:32:15] apptainer works
[2026-04-19 21:32:15] Set ATHENA_PROC_NUMBER=8
[2026-04-19 21:32:15] Set ATHENA_CORE_NUMBER=8
[2026-04-19 21:32:15] Starting ATLAS job with PandaID=7087159280
[2026-04-19 21:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 03:36:14]  *** The last 200 lines of the pilot log: ***
[2026-04-20 03:36:14] 2026-04-20 07:35:20,497 | INFO     | job 7087159280 has finished - writing final server update
[2026-04-20 03:36:14] 2026-04-20 07:35:20,497 | INFO     | total number of processed events: 400 (read)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,504 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7087159280/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,505 | INFO     | extracted standard info from prmon json
[2026-04-20 03:36:14] 2026-04-20 07:35:20,505 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 03:36:14] 2026-04-20 07:35:20,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 03:36:14] 2026-04-20 07:35:20,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 03:36:14] 2026-04-20 07:35:20,513 | INFO     | fitting pss+swap vs Time
[2026-04-20 03:36:14] 2026-04-20 07:35:20,514 | INFO     | sum of square deviations: 14108005546.291292
[2026-04-20 03:36:14] 2026-04-20 07:35:20,518 | INFO     | sum of deviations: 32153828671.789894
[2026-04-20 03:36:14] 2026-04-20 07:35:20,519 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,519 | INFO     | mean y: 2513220.6218487397
[2026-04-20 03:36:14] 2026-04-20 07:35:20,519 | INFO     | intersect: 2513220.6218487397
[2026-04-20 03:36:14] 2026-04-20 07:35:20,520 | INFO     | chi2: 2.2183667407884147
[2026-04-20 03:36:14] 2026-04-20 07:35:20,520 | INFO     | sum of square deviations: 13523480060.47443
[2026-04-20 03:36:14] 2026-04-20 07:35:20,524 | INFO     | sum of deviations: 53938430605.25569
[2026-04-20 03:36:14] 2026-04-20 07:35:20,524 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,524 | INFO     | mean y: 2518837.414772727
[2026-04-20 03:36:14] 2026-04-20 07:35:20,524 | INFO     | intersect: 2518837.414772727
[2026-04-20 03:36:14] 2026-04-20 07:35:20,525 | INFO     | chi2: 1.5349643907688135
[2026-04-20 03:36:14] 2026-04-20 07:35:20,525 | INFO     | current chi2=1.5349643907688135 (change=30.806554094690302 %)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,526 | INFO     | sum of square deviations: 12955348325.135464
[2026-04-20 03:36:14] 2026-04-20 07:35:20,529 | INFO     | sum of deviations: 52821213676.53315
[2026-04-20 03:36:14] 2026-04-20 07:35:20,530 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,530 | INFO     | mean y: 2518537.521613833
[2026-04-20 03:36:14] 2026-04-20 07:35:20,530 | INFO     | intersect: 2518537.521613833
[2026-04-20 03:36:14] 2026-04-20 07:35:20,531 | INFO     | chi2: 1.5353301793508656
[2026-04-20 03:36:14] 2026-04-20 07:35:20,531 | INFO     | current chi2=1.5353301793508656 (change=-0.023830427875192576 %)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,531 | INFO     | right removable region: 346
[2026-04-20 03:36:14] 2026-04-20 07:35:20,532 | INFO     | sum of square deviations: 13523445595.954607
[2026-04-20 03:36:14] 2026-04-20 07:35:20,535 | INFO     | sum of deviations: -24260200334.693195
[2026-04-20 03:36:14] 2026-04-20 07:35:20,535 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,535 | INFO     | mean y: 2527850.1107954546
[2026-04-20 03:36:14] 2026-04-20 07:35:20,536 | INFO     | intersect: 2527850.1107954546
[2026-04-20 03:36:14] 2026-04-20 07:35:20,536 | INFO     | chi2: 0.7854612552736631
[2026-04-20 03:36:14] 2026-04-20 07:35:20,537 | INFO     | current chi2=0.7854612552736631 (change=64.59281322462905 %)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,537 | INFO     | sum of square deviations: 12955258045.608027
[2026-04-20 03:36:14] 2026-04-20 07:35:20,540 | INFO     | sum of deviations: -27787583188.512955
[2026-04-20 03:36:14] 2026-04-20 07:35:20,541 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,541 | INFO     | mean y: 2528784.288184438
[2026-04-20 03:36:14] 2026-04-20 07:35:20,541 | INFO     | intersect: 2528784.288184438
[2026-04-20 03:36:14] 2026-04-20 07:35:20,542 | INFO     | chi2: 0.7690045934046053
[2026-04-20 03:36:14] 2026-04-20 07:35:20,542 | INFO     | current chi2=0.7690045934046053 (change=2.095158960237209 %)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,542 | INFO     | left removable region: 10
[2026-04-20 03:36:14] 2026-04-20 07:35:20,543 | INFO     | sum of square deviations: 11761832267.354103
[2026-04-20 03:36:14] 2026-04-20 07:35:20,546 | INFO     | sum of deviations: -6085387641.458328
[2026-04-20 03:36:14] 2026-04-20 07:35:20,547 | INFO     | mean x (centered): 0.0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,547 | INFO     | mean y: 2534706.4226190476
[2026-04-20 03:36:14] 2026-04-20 07:35:20,547 | INFO     | intersect: 2534706.4226190476
[2026-04-20 03:36:14] 2026-04-20 07:35:20,547 | INFO     | chi2: 0.0750914212854656
[2026-04-20 03:36:14] 2026-04-20 07:35:20,548 | INFO     | current memory leak: -0.52 B/s (using 336 data points, chi2=0.08)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,548 | INFO     | could have reported an average CPU frequency of 2640 MHz (16 samples)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | ..............................
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . Timing measurements:
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . get job = 0 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . initial setup = 2 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . payload setup = 13 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . stage-in = 0 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . payload execution = 21737 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . stage-out = 2 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,549 | INFO     | . log creation = 0 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,550 | INFO     | ..............................
[2026-04-20 03:36:14] 2026-04-20 07:35:20,661 | INFO     | 
[2026-04-20 03:36:14] 2026-04-20 07:35:20,661 | INFO     | job summary report
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | --------------------------------------------------
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | PanDA job id: 7087159280
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | task id: 49263208
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | errors: (none)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | pilot state: finished 
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | transexitcode: 0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | exeerrorcode: 0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | exeerrordiag: 
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | exitcode: 0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,662 | INFO     | exitmsg: OK
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | cpuconsumptiontime: 48648 s
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | nevents: 400
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | neventsw: 0
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | pid: 3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | pgrp: 3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | corecount: 8
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | event service: False
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | sizes: {0: 2281637, 1: 2283466, 11: 2283466, 21754: 2317922, 21755: 2317921, 21758: 2326975, 21759: 2327353}
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | --------------------------------------------------
[2026-04-20 03:36:14] 2026-04-20 07:35:20,663 | INFO     | 
[2026-04-20 03:36:14] 2026-04-20 07:35:20,664 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-20 03:36:14] 2026-04-20 07:35:20,686 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 03:36:14] 2026-04-20 07:35:20,688 | INFO     | job 7087159280 has completed (purged errors)
[2026-04-20 03:36:14] 2026-04-20 07:35:20,689 | INFO     | overall cleanup function is called
[2026-04-20 03:36:14] 2026-04-20 07:35:21,179 | INFO     | PID=3786824 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-20 03:36:14] 2026-04-20 07:35:21,179 | INFO     | .. there are 8 such processes running
[2026-04-20 03:36:14] 2026-04-20 07:35:21,697 | INFO     | --- collectZombieJob: --- 10, [3792828]
[2026-04-20 03:36:14] 2026-04-20 07:35:21,697 | INFO     | zombie collector waiting for pid 3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:21,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 03:36:14] 2026-04-20 07:35:21,697 | INFO     | collected zombie processes
[2026-04-20 03:36:14] 2026-04-20 07:35:21,698 | INFO     | will attempt to kill all subprocesses of pid=3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:21,961 | INFO     | process IDs to be killed: [3792828] (in reverse order)
[2026-04-20 03:36:14] 2026-04-20 07:35:22,055 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 03:36:14] 2026-04-20 07:35:22,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 03:36:14] 2026-04-20 07:35:22,067 | INFO     | did not find any defunct processes belonging to 3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:22,077 | INFO     | did not find any defunct processes belonging to 3792828
[2026-04-20 03:36:14] 2026-04-20 07:35:22,077 | INFO     | Ready for new job
[2026-04-20 03:36:14] 2026-04-20 07:35:22,080 | INFO     | **************************************
[2026-04-20 03:36:14] 2026-04-20 07:35:22,080 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 03:36:14] 2026-04-20 07:35:22,080 | INFO     | **************************************
[2026-04-20 03:36:14] 2026-04-20 07:35:22,080 | INFO     | 
[2026-04-20 03:36:14] 2026-04-20 07:35:22,082 | INFO     | architecture information:
[2026-04-20 03:36:14] 2026-04-20 07:35:22,082 | INFO     | executing command: cat /etc/os-release
[2026-04-20 03:36:14] 2026-04-20 07:35:22,097 | INFO     | cat /etc/os-release:
[2026-04-20 03:36:14] NAME="CentOS Linux"
[2026-04-20 03:36:14] VERSION="7 (Core)"
[2026-04-20 03:36:14] ID="centos"
[2026-04-20 03:36:14] ID_LIKE="rhel fedora"
[2026-04-20 03:36:14] VERSION_ID="7"
[2026-04-20 03:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 03:36:14] ANSI_COLOR="0;31"
[2026-04-20 03:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 03:36:14] HOME_URL="https://www.centos.org/"
[2026-04-20 03:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 03:36:14] 
[2026-04-20 03:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 03:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 03:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 03:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 03:36:14] 
[2026-04-20 03:36:14] 2026-04-20 07:35:22,097 | INFO     | **************************************
[2026-04-20 03:36:14] 2026-04-20 07:35:22,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-20 03:36:14] 2026-04-20 07:35:22,616 | INFO     | sufficient remaining disk space (53133443072 B)
[2026-04-20 03:36:14] 2026-04-20 07:35:22,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 03:36:14] 2026-04-20 07:35:22,617 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 03:36:14] 2026-04-20 07:35:22,617 | INFO     | update_server=False
[2026-04-20 03:36:14] 2026-04-20 07:35:22,617 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 03:36:14] 2026-04-20 07:35:22,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:36:14] 2026-04-20 07:35:22,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 03:36:14] 2026-04-20 07:35:22,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 03:36:14] 2026-04-20 07:35:22,620 | INFO     | all data control threads have been joined
[2026-04-20 03:36:14] 2026-04-20 07:35:22,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-20 03:36:14] 2026-04-20 07:35:22,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-20 03:36:14] 2026-04-20 07:35:22,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:36:14] 2026-04-20 07:35:22,635 | INFO     | will abort loop
[2026-04-20 03:36:14] 2026-04-20 07:35:23,037 | INFO     | all payload control threads have been joined
[2026-04-20 03:36:14] 2026-04-20 07:35:23,622 | INFO     | [job] queue monitor thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:23,623 | INFO     | [job] retrieve thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:23,626 | INFO     | [data] control thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:23,641 | INFO     | [job] job monitor thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:23,845 | INFO     | all job control threads have been joined
[2026-04-20 03:36:14] 2026-04-20 07:35:23,916 | INFO     | [payload] validate_post thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,043 | INFO     | [payload] control thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,148 | INFO     | [data] copytool_in thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,203 | INFO     | [payload] failed_post thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,281 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,310 | INFO     | [job] validate thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,625 | INFO     | [data] copytool_out thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,658 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,706 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:24,851 | INFO     | [job] control thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:25,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:26,627 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 03:36:14] 2026-04-20 07:35:53,592 | INFO     | PID=3786824 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 03:36:14] 2026-04-20 07:35:53,592 | INFO     | .. there are 8 such processes running
[2026-04-20 03:36:14] 2026-04-20 07:35:53,593 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 03:36:14] 2026-04-20 07:35:53,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 03:36:14] 2026-04-20 07:35:53,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 03:36:14] 2026-04-20 07:36:08,550 | INFO     | [monitor] cgroup control has ended
[2026-04-20 03:36:14] 2026-04-20 07:36:08,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190146869056)>', '<ExcThread(monitor, started 140189779343104)>']
[2026-04-20 03:36:14] 2026-04-20 07:36:09,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 03:36:14] 2026-04-20 07:36:09,696 | INFO     | [monitor] control thread has ended
[2026-04-20 03:36:14] 2026-04-20 07:36:13,955 | INFO     | all workflow threads have been joined
[2026-04-20 03:36:14] 2026-04-20 07:36:13,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 03:36:14] 2026-04-20 07:36:13,956 | INFO     | traces error code: 0
[2026-04-20 03:36:14] 2026-04-20 07:36:13,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 03:36:14] 2026-04-20 07:36:14,090 [wrapper] ==== pilot stdout END ====
[2026-04-20 03:36:14] 2026-04-20 07:36:14,094 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 03:36:14] 2026-04-20 07:36:14,098 [wrapper] pilotpid: 3786824
[2026-04-20 03:36:14] 2026-04-20 07:36:14,101 [wrapper] Pilot exit status: 0
[2026-04-20 03:36:14] 2026-04-20 07:36:14,115 [wrapper] pandaids: 7087159280 7087159280
[2026-04-20 03:36:14] 2026-04-20 07:36:14,175 [wrapper] cleanup supervisor_pilot  141578 3786826
[2026-04-20 03:36:14] 2026-04-20 07:36:14,180 [wrapper] Test setup, not cleaning
[2026-04-20 03:36:14] 2026-04-20 07:36:14,183 [wrapper] apfmon messages muted
[2026-04-20 03:36:14] 2026-04-20 07:36:14,187 [wrapper] ==== wrapper stdout END ====
[2026-04-20 03:36:14] 2026-04-20 07:36:14,191 [wrapper] ==== wrapper stderr END ====
[2026-04-20 03:36:14]  *** Error codes and diagnostics ***
[2026-04-20 03:36:14]     "exeErrorCode": 0,
[2026-04-20 03:36:14]     "pilotErrorCode": 0,
[2026-04-20 03:36:14]  *** Listing of results directory ***
[2026-04-20 03:36:14] total 633808
[2026-04-20 03:36:14] drwx------. 5 boincer umatlas      4096 Apr  1 08:07 pilot3
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas    644190 Apr 11 14:42 pilot3.tar.gz
[2026-04-20 03:36:14] -rwx------. 1 boincer umatlas     36322 Apr 11 14:43 runpilot2-wrapper.sh
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas      5094 Apr 11 14:44 queuedata.json
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas       100 Apr 19 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 03:36:14] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 16:54 run_atlas
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas       105 Apr 19 16:54 job.xml
[2026-04-20 03:36:14] -rw-r--r--. 3 boincer umatlas 225298166 Apr 19 16:54 EVNT.49263206._000959.pool.root.1
[2026-04-20 03:36:14] -rw-r--r--. 3 boincer umatlas 225298166 Apr 19 16:54 ATLAS.root_0
[2026-04-20 03:36:14] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 16:54 start_atlas.sh
[2026-04-20 03:36:14] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 16:54 shared
[2026-04-20 03:36:14] -rw-r--r--. 2 boincer umatlas    656927 Apr 19 16:54 input.tar.gz
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas         0 Apr 19 16:54 boinc_lockfile
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas      2575 Apr 19 21:32 pandaJob.out
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas        57 Apr 19 21:32 setup.sh.local
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas    997737 Apr 19 21:32 agis_schedconf.cvmfs.json
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas       441 Apr 19 21:32 workernode_map.json
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas      6575 Apr 20 03:32 init_data.xml
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas 189722653 Apr 20 03:34 HITS.49263208._037430.pool.root.1
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas       488 Apr 20 03:34 boinc_task_state.xml
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas      1052 Apr 20 03:35 memory_monitor_summary.json
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas   1512404 Apr 20 03:35 agis_ddmendpoints.agis.ALL.json
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas    458549 Apr 20 03:35 log.49263208._037430.job.log.tgz.1
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas      6429 Apr 20 03:35 heartbeat_new.json
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas      6320 Apr 20 03:35 heartbeat.json
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas        96 Apr 20 03:35 pilot_heartbeat.json
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas        28 Apr 20 03:36 wrapper_checkpoint.txt
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 03:36 boinc_mmap_file
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas      5004 Apr 20 03:36 pilotlog.txt
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas   1862733 Apr 20 03:36 log.49263208._037430.job.log.1
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas       357 Apr 20 03:36 output.list
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas       410 Apr 20 03:36 runtime_log
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas   2334720 Apr 20 03:36 result.tar.gz
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas      9044 Apr 20 03:36 runtime_log.err
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas       785 Apr 20 03:36 964493093e2f.diag
[2026-04-20 03:36:14] -rw-r--r--. 1 boincer umatlas     23296 Apr 20 03:36 stderr.txt
[2026-04-20 03:36:14] HITS file was successfully produced:
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas 189722653 Apr 20 03:34 shared/HITS.pool.root.1
[2026-04-20 03:36:14]  *** Contents of shared directory: ***
[2026-04-20 03:36:14] total 408244
[2026-04-20 03:36:14] -rw-r--r--. 3 boincer umatlas 225298166 Apr 19 16:54 ATLAS.root_0
[2026-04-20 03:36:14] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 16:54 start_atlas.sh
[2026-04-20 03:36:14] -rw-r--r--. 2 boincer umatlas    656927 Apr 19 16:54 input.tar.gz
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas 189722653 Apr 20 03:34 HITS.pool.root.1
[2026-04-20 03:36:14] -rw-------. 1 boincer umatlas   2334720 Apr 20 03:36 result.tar.gz
03:36:16 (3779036): run_atlas exited; CPU time 49230.134887
03:36:16 (3779036): called boinc_finish(0)

</stderr_txt>
]]>

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