Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:35 (582292): wrapper (7.7.26015): starting
22:53:35 (582292): wrapper: running run_atlas (--nthreads 12)
[2026-04-19 22:53:35] Arguments: --nthreads 12
[2026-04-19 22:53:35] Threads: 12
[2026-04-19 22:53:35] Checking for CVMFS
[2026-04-19 22:53:35] No cvmfs_config command found, will try listing directly
[2026-04-19 22:53:35] CVMFS is ok
[2026-04-19 22:53:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 22:53:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 22:53:35] Further information can be found at the LHC@home message board.
[2026-04-19 22:53:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 22:53:35] Checking for apptainer binary...
[2026-04-19 22:53:35] which: no apptainer in ((null))
[2026-04-19 22:53:35] apptainer is not installed, using version from CVMFS
[2026-04-19 22:53:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 22:53:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-19 22:53:35] apptainer works
[2026-04-19 22:53:35] Set ATHENA_PROC_NUMBER=12
[2026-04-19 22:53:35] Set ATHENA_CORE_NUMBER=12
[2026-04-19 22:53:35] Starting ATLAS job with PandaID=7102873946
[2026-04-19 22:53:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 22:56:52]  *** The last 200 lines of the pilot log: ***
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | found no stored workdir sizes
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | will not add max space = 0 B to job metrics
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | WARNING  | wrong length of table data, x=[1776632046.0], y=[1130.0] (must be same and length>=4)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | could have reported an average CPU frequency of 3660 MHz (4 samples)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . Timing measurements:
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . get job = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . initial setup = 4 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload setup = 5 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-in = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload execution = 9 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-out = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . log creation = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7102873946/pilotlog.txt
[2026-04-19 22:56:52] 2026-04-19 20:56:13,387 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-04-19 22:56:52] - Log from pilotlog.txt -
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | extracted standard info from prmon json
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | found no stored workdir sizes
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | will not add max space = 0 B to job metrics
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | WARNING  | wrong length of table data, x=[1776632046.0], y=[1130.0] (must be same and length>=4)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | could have reported an average CPU frequency of 3660 MHz (4 samples)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . Timing measurements:
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . get job = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . initial setup = 4 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload setup = 5 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-in = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload execution = 9 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-out = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . log creation = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7102873946/pilotlog.txt
[2026-04-19 22:56:52] 2026-04-19 20:56:13,387 | WARNING  | 
[2026-04-19 22:56:52] [begin log extracts]
[2026-04-19 22:56:52] - Log from pilotlog.txt -
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | extracted standard info from prmon json
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | WARNING  | found no stored workdir sizes
[2026-04-19 22:56:52] 2026-04-19 20:56:13,373 | INFO     | will not add max space = 0 B to job metrics
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | WARNING  | wrong length of table data, x=[1776632046.0], y=[1130.0] (must be same and length>=4)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | could have reported an average CPU frequency of 3660 MHz (4 samples)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . Timing measurements:
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . get job = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . initial setup = 4 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload setup = 5 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-in = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . payload execution = 9 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . stage-out = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | . log creation = 0 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | ..............................
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-19 22:56:52] 2026-04-19 20:56:13,374 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7102873946/pilotlog.txt
[2026-04-19 22:56:52] [end log extracts]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,387 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,388 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: File EVNT.498
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | 
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | job summary report
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | --------------------------------------------------
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | PanDA job id: 7102873946
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | task id: 49820244
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-04-19 22:54:08,697 CRITICAL Transform executor raised TransformValidationExceptio
[2026-04-19 22:56:52] 2026-04-19 20:56:13,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | pilot state: failed 
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | transexitcode: 66
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | exeerrorcode: 66
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | exeerrordiag: File EVNT.49820242._000031.pool.root.1 did not pass corruption test
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | exitcode: 66
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | exitmsg: File EVNT.49820242._000031.pool.root.1 did not pass corruption test
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | cpuconsumptiontime: 10 s
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | nevents: 0
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | neventsw: 0
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | pid: 592734
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | pgrp: 592734
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | corecount: 12
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | event service: False
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | sizes: {0: 2281614, 1: 2283443, 11: 2283443, 18: 2298972, 19: 2303307, 136: 2303445}
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | --------------------------------------------------
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | 
[2026-04-19 22:56:52] 2026-04-19 20:56:13,881 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/0
[2026-04-19 22:56:52] 2026-04-19 20:56:13,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,896 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | job 7102873946 has completed (purged errors)
[2026-04-19 22:56:52] 2026-04-19 20:56:13,897 | INFO     | overall cleanup function is called
[2026-04-19 22:56:52] 2026-04-19 20:56:14,903 | INFO     | --- collectZombieJob: --- 10, [592734]
[2026-04-19 22:56:52] 2026-04-19 20:56:14,903 | INFO     | zombie collector waiting for pid 592734
[2026-04-19 22:56:52] 2026-04-19 20:56:14,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 22:56:52] 2026-04-19 20:56:14,903 | INFO     | collected zombie processes
[2026-04-19 22:56:52] 2026-04-19 20:56:14,903 | INFO     | will attempt to kill all subprocesses of pid=592734
[2026-04-19 22:56:52] 2026-04-19 20:56:15,244 | INFO     | process IDs to be killed: [592734] (in reverse order)
[2026-04-19 22:56:52] 2026-04-19 20:56:15,387 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 22:56:52] 2026-04-19 20:56:15,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 22:56:52] 2026-04-19 20:56:15,410 | INFO     | did not find any defunct processes belonging to 592734
[2026-04-19 22:56:52] 2026-04-19 20:56:15,430 | INFO     | did not find any defunct processes belonging to 592734
[2026-04-19 22:56:52] 2026-04-19 20:56:15,430 | INFO     | Ready for new job
[2026-04-19 22:56:52] 2026-04-19 20:56:15,431 | INFO     | **************************************
[2026-04-19 22:56:52] 2026-04-19 20:56:15,431 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 22:56:52] 2026-04-19 20:56:15,431 | INFO     | **************************************
[2026-04-19 22:56:52] 2026-04-19 20:56:15,431 | INFO     | 
[2026-04-19 22:56:52] 2026-04-19 20:56:15,436 | INFO     | architecture information:
[2026-04-19 22:56:52] 2026-04-19 20:56:15,437 | INFO     | executing command: cat /etc/os-release
[2026-04-19 22:56:52] 2026-04-19 20:56:15,448 | INFO     | cat /etc/os-release:
[2026-04-19 22:56:52] NAME="CentOS Linux"
[2026-04-19 22:56:52] VERSION="7 (Core)"
[2026-04-19 22:56:52] ID="centos"
[2026-04-19 22:56:52] ID_LIKE="rhel fedora"
[2026-04-19 22:56:52] VERSION_ID="7"
[2026-04-19 22:56:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 22:56:52] ANSI_COLOR="0;31"
[2026-04-19 22:56:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 22:56:52] HOME_URL="https://www.centos.org/"
[2026-04-19 22:56:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 22:56:52] 
[2026-04-19 22:56:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 22:56:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 22:56:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 22:56:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 22:56:52] 
[2026-04-19 22:56:52] 2026-04-19 20:56:15,449 | INFO     | **************************************
[2026-04-19 22:56:52] 2026-04-19 20:56:15,952 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/0
[2026-04-19 22:56:52] 2026-04-19 20:56:15,967 | INFO     | sufficient remaining disk space (196679303168 B)
[2026-04-19 22:56:52] 2026-04-19 20:56:15,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 22:56:52] 2026-04-19 20:56:15,967 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 22:56:52] 2026-04-19 20:56:15,967 | INFO     | update_server=False
[2026-04-19 22:56:52] 2026-04-19 20:56:15,967 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 22:56:52] 2026-04-19 20:56:16,228 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-19 22:56:52] 2026-04-19 20:56:16,228 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-19 22:56:52] 2026-04-19 20:56:16,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:56:52] 2026-04-19 20:56:16,228 | INFO     | will abort loop
[2026-04-19 22:56:52] 2026-04-19 20:56:16,244 | INFO     | all data control threads have been joined
[2026-04-19 22:56:52] 2026-04-19 20:56:16,324 | INFO     | all job control threads have been joined
[2026-04-19 22:56:52] 2026-04-19 20:56:16,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 22:56:52] 2026-04-19 20:56:16,695 | INFO     | all payload control threads have been joined
[2026-04-19 22:56:52] 2026-04-19 20:56:16,973 | INFO     | [job] retrieve thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,233 | INFO     | [job] job monitor thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,247 | INFO     | [data] control thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,330 | INFO     | [job] control thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,700 | INFO     | [payload] control thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,712 | INFO     | [payload] validate_post thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:17,956 | INFO     | [job] validate thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,062 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,143 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,188 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,196 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,282 | INFO     | [data] copytool_in thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,361 | INFO     | [payload] failed_post thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:56:52] 2026-04-19 20:56:18,470 | INFO     | [data] copytool_out thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:18,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 22:56:52] 2026-04-19 20:56:19,447 | INFO     | [job] queue monitor thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:22,966 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 22:56:52] 2026-04-19 20:56:45,464 | INFO     | PID=586909 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-19 22:56:52] 2026-04-19 20:56:45,464 | INFO     | .. there are 13 such processes running
[2026-04-19 22:56:52] 2026-04-19 20:56:45,465 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 22:56:52] 2026-04-19 20:56:45,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 22:56:52] 2026-04-19 20:56:45,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 22:56:52] 2026-04-19 20:56:46,290 | INFO     | [monitor] cgroup control has ended
[2026-04-19 22:56:52] 2026-04-19 20:56:46,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23180472235840)>', '<ExcThread(monitor, started 23180233422592)>']
[2026-04-19 22:56:52] 2026-04-19 20:56:47,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 22:56:52] 2026-04-19 20:56:47,475 | INFO     | [monitor] control thread has ended
[2026-04-19 22:56:52] 2026-04-19 20:56:51,859 | INFO     | all workflow threads have been joined
[2026-04-19 22:56:52] 2026-04-19 20:56:51,860 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 22:56:52] 2026-04-19 20:56:51,860 | INFO     | traces error code: 0
[2026-04-19 22:56:52] 2026-04-19 20:56:51,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 22:56:52] 2026-04-19 20:56:52,037 [wrapper] ==== pilot stdout END ====
[2026-04-19 22:56:52] 2026-04-19 20:56:52,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 22:56:52] 2026-04-19 20:56:52,040 [wrapper] pilotpid: 586909
[2026-04-19 22:56:52] 2026-04-19 20:56:52,041 [wrapper] Pilot exit status: 0
[2026-04-19 22:56:52] 2026-04-19 20:56:52,048 [wrapper] pandaids: 7102873946
[2026-04-19 22:56:52] 2026-04-19 20:56:52,145 [wrapper] cleanup supervisor_pilot  586915 586910
[2026-04-19 22:56:52] 2026-04-19 20:56:52,147 [wrapper] Test setup, not cleaning
[2026-04-19 22:56:52] 2026-04-19 20:56:52,149 [wrapper] apfmon messages muted
[2026-04-19 22:56:52] 2026-04-19 20:56:52,150 [wrapper] ==== wrapper stdout END ====
[2026-04-19 22:56:52] 2026-04-19 20:56:52,152 [wrapper] ==== wrapper stderr END ====
[2026-04-19 22:56:52]  *** Error codes and diagnostics ***
[2026-04-19 22:56:52]     "exeErrorCode": 66,
[2026-04-19 22:56:52]     "exeErrorDiag": "File EVNT.49820242._000031.pool.root.1 did not pass corruption test",
[2026-04-19 22:56:52]     "pilotErrorCode": 1305,
[2026-04-19 22:56:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: File EVNT.49820242._000031.pool.root.1 did not pass corruption test",
[2026-04-19 22:56:52]  *** Listing of results directory ***
[2026-04-19 22:56:52] total 2187048
[2026-04-19 22:56:52] -rwx------. 1 boinc boinc      36322 Apr 19 05:01 runpilot2-wrapper.sh
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc     644190 Apr 19 08:37 pilot3.tar.gz
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc       5094 Apr 19 09:04 queuedata.json
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc        100 Apr 19 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 22:56:52] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 22:53 run_atlas
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc        105 Apr 19 22:53 job.xml
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc 2235290498 Apr 19 22:53 ATLAS.root_0
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc      15615 Apr 19 22:53 start_atlas.sh
[2026-04-19 22:56:52] drwxrwx--x. 2 boinc boinc       4096 Apr 19 22:53 shared
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc     656913 Apr 19 22:53 input.tar.gz
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc       6626 Apr 19 22:53 init_data.xml
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc          0 Apr 19 22:53 boinc_lockfile
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc       2549 Apr 19 22:53 pandaJob.out
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc     997729 Apr 19 22:53 agis_schedconf.cvmfs.json
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc    1512404 Apr 19 22:53 agis_ddmendpoints.agis.ALL.json
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc        442 Apr 19 22:53 workernode_map.json
[2026-04-19 22:56:52] drwx------. 5 boinc boinc       4096 Apr 19 22:53 pilot3
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc        964 Apr 19 22:54 memory_monitor_summary.json
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc      16529 Apr 19 22:54 log.49820244._005253.job.log.tgz.1
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc       5806 Apr 19 22:56 heartbeat_new.json
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc       5768 Apr 19 22:56 heartbeat.json
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc         22 Apr 19 22:56 wrapper_checkpoint.txt
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc       8192 Apr 19 22:56 boinc_mmap_file
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc        481 Apr 19 22:56 boinc_task_state.xml
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc         95 Apr 19 22:56 pilot_heartbeat.json
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc       5015 Apr 19 22:56 pilotlog.txt
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc      76795 Apr 19 22:56 log.49820244._005253.job.log.1
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc        188 Apr 19 22:56 output.list
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc        410 Apr 19 22:56 runtime_log
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc     112640 Apr 19 22:56 result.tar.gz
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc       8640 Apr 19 22:56 runtime_log.err
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc        646 Apr 19 22:56 45816d5e75c0.diag
[2026-04-19 22:56:52] -rw-r--r--. 1 boinc boinc      21552 Apr 19 22:56 stderr.txt
[2026-04-19 22:56:52] No HITS result produced
[2026-04-19 22:56:52]  *** Contents of shared directory: ***
[2026-04-19 22:56:52] total 2183680
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc 2235290498 Apr 19 22:53 ATLAS.root_0
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc      15615 Apr 19 22:53 start_atlas.sh
[2026-04-19 22:56:52] -rw-r--r--. 2 boinc boinc     656913 Apr 19 22:53 input.tar.gz
[2026-04-19 22:56:52] -rw-------. 1 boinc boinc     112640 Apr 19 22:56 result.tar.gz
22:56:54 (582292): run_atlas exited; CPU time 12.044507
22:56:54 (582292): called boinc_finish(0)

</stderr_txt>
]]>

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