Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:34:21 (3279475): wrapper (7.7.26015): starting
06:34:21 (3279475): wrapper: running run_atlas (--nthreads 9)
[2026-04-19 06:34:21] Arguments: --nthreads 9
[2026-04-19 06:34:21] Threads: 9
[2026-04-19 06:34:21] Checking for CVMFS
[2026-04-19 06:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 06:34:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 06:34:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 06:34:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 06:34:22] 2.13.3.0 11285 237251 225600 158617 2 272 28554185 32935936 24057 16776704 0 1349671049 99.575 1562338773 34201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-19 06:34:22] CVMFS is ok
[2026-04-19 06:34:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 06:34:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 06:34:22] Further information can be found at the LHC@home message board.
[2026-04-19 06:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 06:34:22] Checking for apptainer binary...
[2026-04-19 06:34:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 06:34:22] Running /usr/bin/apptainer --version
[2026-04-19 06:34:22] apptainer version 1.4.5-2.el9
[2026-04-19 06:34:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 06:34:22] c7-3-29.aglt2.org
[2026-04-19 06:34:22] apptainer works
[2026-04-19 06:34:22] Set ATHENA_PROC_NUMBER=9
[2026-04-19 06:34:22] Set ATHENA_CORE_NUMBER=9
[2026-04-19 06:34:23] Starting ATLAS job with PandaID=7093115193
[2026-04-19 06:34:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 08:58:17]  *** The last 200 lines of the pilot log: ***
[2026-04-19 08:58:17] 2026-04-19 12:57:13,657 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-19 08:58:17] 2026-04-19 12:57:13,658 | INFO     | this job has now completed (state=finished)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,658 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,658 | INFO     | log transfer has been attempted: DONE
[2026-04-19 08:58:17] 2026-04-19 12:57:13,658 | INFO     | job 7093115193 has finished - writing final server update
[2026-04-19 08:58:17] 2026-04-19 12:57:13,658 | INFO     | total number of processed events: 400 (read)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,676 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7093115193/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,676 | INFO     | extracted standard info from prmon json
[2026-04-19 08:58:17] 2026-04-19 12:57:13,677 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 08:58:17] 2026-04-19 12:57:13,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 08:58:17] 2026-04-19 12:57:13,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 08:58:17] 2026-04-19 12:57:13,679 | INFO     | fitting pss+swap vs Time
[2026-04-19 08:58:17] 2026-04-19 12:57:13,680 | INFO     | sum of square deviations: 850810866.5428559
[2026-04-19 08:58:17] 2026-04-19 12:57:13,680 | INFO     | sum of deviations: 61002872770.571396
[2026-04-19 08:58:17] 2026-04-19 12:57:13,680 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,680 | INFO     | mean y: 2446898.9285714286
[2026-04-19 08:58:17] 2026-04-19 12:57:13,681 | INFO     | intersect: 2446898.9285714286
[2026-04-19 08:58:17] 2026-04-19 12:57:13,681 | INFO     | chi2: 4.541662173809185
[2026-04-19 08:58:17] 2026-04-19 12:57:13,681 | INFO     | sum of square deviations: 762867471.5259277
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | sum of deviations: 67671285191.1037
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | mean y: 2457990.237037037
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | intersect: 2457990.237037037
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | chi2: 3.796852248098951
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | current chi2=3.796852248098951 (change=16.399500826049923 %)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,682 | INFO     | right removable region: 134
[2026-04-19 08:58:17] 2026-04-19 12:57:13,683 | INFO     | sum of square deviations: 762862591.5259277
[2026-04-19 08:58:17] 2026-04-19 12:57:13,683 | INFO     | sum of deviations: 21147395429.25184
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | mean y: 2515813.7185185184
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | intersect: 2515813.7185185184
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | chi2: 1.4287975835881668
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | current chi2=1.4287975835881668 (change=68.54020556993994 %)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,684 | INFO     | sum of square deviations: 681193504.0076928
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | sum of deviations: 5075743742.73077
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | mean y: 2545675.346153846
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | intersect: 2545675.346153846
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | chi2: 0.953200652472145
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | current chi2=0.953200652472145 (change=33.28651563937042 %)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,685 | INFO     | sum of square deviations: 605571041.4879987
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | sum of deviations: -3319873725.9360027
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | mean y: 2562539.992
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | intersect: 2562539.992
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | chi2: 0.8217944497146576
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | current chi2=0.8217944497146576 (change=13.785786068933415 %)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,686 | INFO     | left removable region: 15
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | sum of square deviations: 522484039.4621858
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | sum of deviations: 4800494521.840337
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | mean x (centered): 0.0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | mean y: 2579681.3949579834
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | intersect: 2579681.3949579834
[2026-04-19 08:58:17] 2026-04-19 12:57:13,687 | INFO     | chi2: 0.05167670369427776
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | current memory leak: 9.19 B/s (using 119 data points, chi2=0.05)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | could have reported an average CPU frequency of 3040 MHz (8 samples)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | ..............................
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | . Timing measurements:
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | . get job = 0 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | . initial setup = 12 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | . payload setup = 23 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,688 | INFO     | . stage-in = 0 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,689 | INFO     | . payload execution = 8493 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,689 | INFO     | . stage-out = 0 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,689 | INFO     | . log creation = 0 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,689 | INFO     | ..............................
[2026-04-19 08:58:17] 2026-04-19 12:57:13,842 | INFO     | 
[2026-04-19 08:58:17] 2026-04-19 12:57:13,842 | INFO     | job summary report
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | --------------------------------------------------
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | PanDA job id: 7093115193
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | task id: 49545114
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | errors: (none)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | pilot state: finished 
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | transexitcode: 0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | exeerrorcode: 0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | exeerrordiag: 
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | exitcode: 0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | exitmsg: OK
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | cpuconsumptiontime: 33847 s
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | nevents: 400
[2026-04-19 08:58:17] 2026-04-19 12:57:13,843 | INFO     | neventsw: 0
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | pid: 3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | pgrp: 3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | corecount: 9
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | event service: False
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | sizes: {0: 2281022, 1: 2283508, 12: 2283508, 8520: 2311513, 8522: 2320511, 8526: 2320889}
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | --------------------------------------------------
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | 
[2026-04-19 08:58:17] 2026-04-19 12:57:13,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-19 08:58:17] 2026-04-19 12:57:13,868 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,868 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | job 7093115193 has completed (purged errors)
[2026-04-19 08:58:17] 2026-04-19 12:57:13,870 | INFO     | overall cleanup function is called
[2026-04-19 08:58:17] 2026-04-19 12:57:14,878 | INFO     | --- collectZombieJob: --- 10, [3303719]
[2026-04-19 08:58:17] 2026-04-19 12:57:14,878 | INFO     | zombie collector waiting for pid 3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:14,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 08:58:17] 2026-04-19 12:57:14,881 | INFO     | collected zombie processes
[2026-04-19 08:58:17] 2026-04-19 12:57:14,881 | INFO     | will attempt to kill all subprocesses of pid=3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:15,561 | INFO     | process IDs to be killed: [3303719] (in reverse order)
[2026-04-19 08:58:17] 2026-04-19 12:57:15,726 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 08:58:17] 2026-04-19 12:57:15,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 08:58:17] 2026-04-19 12:57:15,746 | INFO     | did not find any defunct processes belonging to 3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:15,766 | INFO     | did not find any defunct processes belonging to 3303719
[2026-04-19 08:58:17] 2026-04-19 12:57:15,768 | INFO     | Ready for new job
[2026-04-19 08:58:17] 2026-04-19 12:57:15,770 | INFO     | **************************************
[2026-04-19 08:58:17] 2026-04-19 12:57:15,770 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 08:58:17] 2026-04-19 12:57:15,770 | INFO     | **************************************
[2026-04-19 08:58:17] 2026-04-19 12:57:15,770 | INFO     | 
[2026-04-19 08:58:17] 2026-04-19 12:57:15,777 | INFO     | architecture information:
[2026-04-19 08:58:17] 2026-04-19 12:57:15,780 | INFO     | executing command: cat /etc/os-release
[2026-04-19 08:58:17] 2026-04-19 12:57:15,820 | INFO     | cat /etc/os-release:
[2026-04-19 08:58:17] NAME="CentOS Linux"
[2026-04-19 08:58:17] VERSION="7 (Core)"
[2026-04-19 08:58:17] ID="centos"
[2026-04-19 08:58:17] ID_LIKE="rhel fedora"
[2026-04-19 08:58:17] VERSION_ID="7"
[2026-04-19 08:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 08:58:17] ANSI_COLOR="0;31"
[2026-04-19 08:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 08:58:17] HOME_URL="https://www.centos.org/"
[2026-04-19 08:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 08:58:17] 
[2026-04-19 08:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 08:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 08:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 08:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 08:58:17] 
[2026-04-19 08:58:17] 2026-04-19 12:57:15,820 | INFO     | **************************************
[2026-04-19 08:58:17] 2026-04-19 12:57:16,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-19 08:58:17] 2026-04-19 12:57:16,349 | INFO     | sufficient remaining disk space (69283610624 B)
[2026-04-19 08:58:17] 2026-04-19 12:57:16,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 08:58:17] 2026-04-19 12:57:16,350 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 08:58:17] 2026-04-19 12:57:16,350 | INFO     | update_server=False
[2026-04-19 08:58:17] 2026-04-19 12:57:16,350 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 08:58:17] 2026-04-19 12:57:16,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 08:58:17] 2026-04-19 12:57:16,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 08:58:17] 2026-04-19 12:57:16,352 | INFO     | aborting loop
[2026-04-19 08:58:17] 2026-04-19 12:57:16,452 | INFO     | all job control threads have been joined
[2026-04-19 08:58:17] 2026-04-19 12:57:16,743 | INFO     | all data control threads have been joined
[2026-04-19 08:58:17] 2026-04-19 12:57:17,356 | INFO     | [job] retrieve thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:17,363 | INFO     | all payload control threads have been joined
[2026-04-19 08:58:17] 2026-04-19 12:57:17,364 | INFO     | [job] job monitor thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:17,458 | INFO     | [job] control thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:17,749 | INFO     | [data] control thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:17,865 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:17,990 | INFO     | [job] validate thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,034 | INFO     | [data] copytool_in thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,094 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,357 | INFO     | [data] copytool_out thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,376 | INFO     | [payload] control thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,477 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,657 | INFO     | [payload] validate_post thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,675 | INFO     | [payload] failed_post thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:18,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 08:58:17] 2026-04-19 12:57:19,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 08:58:17] 2026-04-19 12:57:19,786 | INFO     | [job] queue monitor thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:23,677 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 08:58:17] 2026-04-19 12:57:45,696 | INFO     | PID=3288135 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 08:58:17] 2026-04-19 12:57:45,697 | INFO     | .. there are 19 such processes running
[2026-04-19 08:58:17] 2026-04-19 12:57:45,697 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 08:58:17] 2026-04-19 12:57:45,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 08:58:17] 2026-04-19 12:57:45,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 08:58:17] 2026-04-19 12:58:10,072 | INFO     | [monitor] cgroup control has ended
[2026-04-19 08:58:17] 2026-04-19 12:58:11,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062398465856)>', '<ExcThread(monitor, started 140061618198272)>']
[2026-04-19 08:58:17] 2026-04-19 12:58:11,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 08:58:17] 2026-04-19 12:58:11,858 | INFO     | [monitor] control thread has ended
[2026-04-19 08:58:17] 2026-04-19 12:58:16,784 | INFO     | all workflow threads have been joined
[2026-04-19 08:58:17] 2026-04-19 12:58:16,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 08:58:17] 2026-04-19 12:58:16,784 | INFO     | traces error code: 0
[2026-04-19 08:58:17] 2026-04-19 12:58:16,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 08:58:17] 2026-04-19 12:58:16,939 [wrapper] ==== pilot stdout END ====
[2026-04-19 08:58:17] 2026-04-19 12:58:16,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 08:58:17] 2026-04-19 12:58:16,945 [wrapper] pilotpid: 3288135
[2026-04-19 08:58:17] 2026-04-19 12:58:16,957 [wrapper] Pilot exit status: 0
[2026-04-19 08:58:17] 2026-04-19 12:58:16,982 [wrapper] pandaids: 7093115193
[2026-04-19 08:58:17] 2026-04-19 12:58:17,084 [wrapper] cleanup supervisor_pilot 3771972 3288136
[2026-04-19 08:58:17] 2026-04-19 12:58:17,087 [wrapper] Test setup, not cleaning
[2026-04-19 08:58:17] 2026-04-19 12:58:17,089 [wrapper] apfmon messages muted
[2026-04-19 08:58:17] 2026-04-19 12:58:17,091 [wrapper] ==== wrapper stdout END ====
[2026-04-19 08:58:17] 2026-04-19 12:58:17,095 [wrapper] ==== wrapper stderr END ====
[2026-04-19 08:58:17]  *** Error codes and diagnostics ***
[2026-04-19 08:58:17]     "exeErrorCode": 0,
[2026-04-19 08:58:17]     "pilotErrorCode": 0,
[2026-04-19 08:58:17]  *** Listing of results directory ***
[2026-04-19 08:58:17] total 467352
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas    644190 Apr 19 06:19 pilot3.tar.gz
[2026-04-19 08:58:17] -rwx------. 1 boincer umatlas     36322 Apr 19 06:25 runpilot2-wrapper.sh
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas      5094 Apr 19 06:29 queuedata.json
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas       100 Apr 19 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 08:58:17] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 06:34 run_atlas
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas       105 Apr 19 06:34 job.xml
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas 280195708 Apr 19 06:34 EVNT.49539591._000606.pool.root.1
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas    656933 Apr 19 06:34 input.tar.gz
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 06:34 start_atlas.sh
[2026-04-19 08:58:17] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 06:34 shared
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas         0 Apr 19 06:34 boinc_lockfile
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas      2605 Apr 19 06:34 pandaJob.out
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas        57 Apr 19 06:34 setup.sh.local
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas    997326 Apr 19 06:34 agis_schedconf.cvmfs.json
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas   1512404 Apr 19 06:34 agis_ddmendpoints.agis.ALL.json
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas       429 Apr 19 06:34 workernode_map.json
[2026-04-19 08:58:17] drwx------. 5 boincer umatlas      4096 Apr 19 06:34 pilot3
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas      6860 Apr 19 08:54 init_data.xml
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas 192010519 Apr 19 08:56 HITS.49545114._015135.pool.root.1
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas       487 Apr 19 08:56 boinc_task_state.xml
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas      1043 Apr 19 08:57 memory_monitor_summary.json
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas        95 Apr 19 08:57 pilot_heartbeat.json
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas    353819 Apr 19 08:57 log.49545114._015135.job.log.tgz.1
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas      6366 Apr 19 08:57 heartbeat_new.json
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas      6257 Apr 19 08:57 heartbeat.json
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas        27 Apr 19 08:58 wrapper_checkpoint.txt
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 08:58 boinc_mmap_file
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas      4819 Apr 19 08:58 pilotlog.txt
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas    792582 Apr 19 08:58 log.49545114._015135.job.log.1
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas       357 Apr 19 08:58 output.list
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas       410 Apr 19 08:58 runtime_log
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas   1167360 Apr 19 08:58 result.tar.gz
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas      8958 Apr 19 08:58 runtime_log.err
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas       655 Apr 19 08:58 adacc0cd6a1e.diag
[2026-04-19 08:58:17] -rw-r--r--. 1 boincer umatlas     21009 Apr 19 08:58 stderr.txt
[2026-04-19 08:58:17] HITS file was successfully produced:
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas 192010519 Apr 19 08:56 shared/HITS.pool.root.1
[2026-04-19 08:58:17]  *** Contents of shared directory: ***
[2026-04-19 08:58:17] total 462952
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas 280195708 Apr 19 06:34 ATLAS.root_0
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas    656933 Apr 19 06:34 input.tar.gz
[2026-04-19 08:58:17] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 06:34 start_atlas.sh
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas 192010519 Apr 19 08:56 HITS.pool.root.1
[2026-04-19 08:58:17] -rw-------. 1 boincer umatlas   1167360 Apr 19 08:58 result.tar.gz
08:58:18 (3279475): run_atlas exited; CPU time 34172.884071
08:58:18 (3279475): called boinc_finish(0)

</stderr_txt>
]]>

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