Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:26:36 (1559601): wrapper (7.7.26015): starting
06:26:36 (1559601): wrapper: running run_atlas (--nthreads 9)
[2026-04-19 06:26:36] Arguments: --nthreads 9
[2026-04-19 06:26:36] Threads: 9
[2026-04-19 06:26:36] Checking for CVMFS
[2026-04-19 06:26:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 06:26:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 06:26:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 06:26:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 06:26:39] 2.13.3.0 4389 234195 150340 158617 3 291 25667902 32935936 11217 16776704 0 994469079 99.694 808537556 32492 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-19 06:26:39] CVMFS is ok
[2026-04-19 06:26:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 06:26:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 06:26:39] Further information can be found at the LHC@home message board.
[2026-04-19 06:26:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 06:26:39] Checking for apptainer binary...
[2026-04-19 06:26:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 06:26:39] Running /usr/bin/apptainer --version
[2026-04-19 06:26:40] apptainer version 1.4.5-2.el9
[2026-04-19 06:26:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 06:26:40] c-8-24.aglt2.org
[2026-04-19 06:26:40] apptainer works
[2026-04-19 06:26:40] Set ATHENA_PROC_NUMBER=9
[2026-04-19 06:26:40] Set ATHENA_CORE_NUMBER=9
[2026-04-19 06:26:40] Starting ATLAS job with PandaID=7090631595
[2026-04-19 06:26:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 11:28:23]  *** The last 200 lines of the pilot log: ***
[2026-04-19 11:28:23] 2026-04-19 15:27:15,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 11:28:23] 2026-04-19 15:27:15,747 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 11:28:23] 2026-04-19 15:27:15,753 | INFO     | fitting pss+swap vs Time
[2026-04-19 11:28:23] 2026-04-19 15:27:15,753 | INFO     | sum of square deviations: 7641261172.213097
[2026-04-19 11:28:23] 2026-04-19 15:27:15,761 | INFO     | sum of deviations: 177527369675.36783
[2026-04-19 11:28:23] 2026-04-19 15:27:15,761 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,762 | INFO     | mean y: 2515456.202749141
[2026-04-19 11:28:23] 2026-04-19 15:27:15,762 | INFO     | intersect: 2515456.202749141
[2026-04-19 11:28:23] 2026-04-19 15:27:15,762 | INFO     | chi2: 5.649146614305898
[2026-04-19 11:28:23] 2026-04-19 15:27:15,763 | INFO     | sum of square deviations: 7254242543.678277
[2026-04-19 11:28:23] 2026-04-19 15:27:15,765 | INFO     | sum of deviations: 174950194491.39844
[2026-04-19 11:28:23] 2026-04-19 15:27:15,765 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,766 | INFO     | mean y: 2514440.762237762
[2026-04-19 11:28:23] 2026-04-19 15:27:15,766 | INFO     | intersect: 2514440.762237762
[2026-04-19 11:28:23] 2026-04-19 15:27:15,766 | INFO     | chi2: 5.650794253837569
[2026-04-19 11:28:23] 2026-04-19 15:27:15,766 | INFO     | current chi2=5.650794253837569 (change=-0.02916616693039742 %)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,767 | INFO     | right removable region: 285
[2026-04-19 11:28:23] 2026-04-19 15:27:15,767 | INFO     | sum of square deviations: 7253960108.405581
[2026-04-19 11:28:23] 2026-04-19 15:27:15,770 | INFO     | sum of deviations: 80658929468.62245
[2026-04-19 11:28:23] 2026-04-19 15:27:15,770 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,770 | INFO     | mean y: 2553557.786713287
[2026-04-19 11:28:23] 2026-04-19 15:27:15,770 | INFO     | intersect: 2553557.786713287
[2026-04-19 11:28:23] 2026-04-19 15:27:15,771 | INFO     | chi2: 1.5172992592356518
[2026-04-19 11:28:23] 2026-04-19 15:27:15,771 | INFO     | current chi2=1.5172992592356518 (change=73.14108903824086 %)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,772 | INFO     | sum of square deviations: 6880048372.469801
[2026-04-19 11:28:23] 2026-04-19 15:27:15,774 | INFO     | sum of deviations: 27627047757.451935
[2026-04-19 11:28:23] 2026-04-19 15:27:15,774 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,774 | INFO     | mean y: 2575137.857651246
[2026-04-19 11:28:23] 2026-04-19 15:27:15,774 | INFO     | intersect: 2575137.857651246
[2026-04-19 11:28:23] 2026-04-19 15:27:15,775 | INFO     | chi2: 0.3128554113198939
[2026-04-19 11:28:23] 2026-04-19 15:27:15,775 | INFO     | current chi2=0.3128554113198939 (change=79.380770839004 %)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,776 | INFO     | sum of square deviations: 6519207502.909426
[2026-04-19 11:28:23] 2026-04-19 15:27:15,778 | INFO     | sum of deviations: 10061134931.442032
[2026-04-19 11:28:23] 2026-04-19 15:27:15,778 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,779 | INFO     | mean y: 2582552.644927536
[2026-04-19 11:28:23] 2026-04-19 15:27:15,779 | INFO     | intersect: 2582552.644927536
[2026-04-19 11:28:23] 2026-04-19 15:27:15,779 | INFO     | chi2: 0.18877954688547696
[2026-04-19 11:28:23] 2026-04-19 15:27:15,779 | INFO     | current chi2=0.18877954688547696 (change=39.65917159973611 %)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,780 | INFO     | sum of square deviations: 6171254591.387468
[2026-04-19 11:28:23] 2026-04-19 15:27:15,782 | INFO     | sum of deviations: 1262344929.2841363
[2026-04-19 11:28:23] 2026-04-19 15:27:15,783 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,783 | INFO     | mean y: 2586400.4944649446
[2026-04-19 11:28:23] 2026-04-19 15:27:15,783 | INFO     | intersect: 2586400.4944649446
[2026-04-19 11:28:23] 2026-04-19 15:27:15,783 | INFO     | chi2: 0.15408921908050127
[2026-04-19 11:28:23] 2026-04-19 15:27:15,783 | INFO     | current chi2=0.15408921908050127 (change=18.376105026897093 %)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,784 | INFO     | left removable region: 20
[2026-04-19 11:28:23] 2026-04-19 15:27:15,784 | INFO     | sum of square deviations: 5770488848.603773
[2026-04-19 11:28:23] 2026-04-19 15:27:15,786 | INFO     | sum of deviations: 1779930188.226415
[2026-04-19 11:28:23] 2026-04-19 15:27:15,787 | INFO     | mean x (centered): 0.0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,787 | INFO     | mean y: 2586635.8075471697
[2026-04-19 11:28:23] 2026-04-19 15:27:15,787 | INFO     | intersect: 2586635.8075471697
[2026-04-19 11:28:23] 2026-04-19 15:27:15,787 | INFO     | chi2: 0.1538679369228146
[2026-04-19 11:28:23] 2026-04-19 15:27:15,788 | INFO     | current memory leak: 0.31 B/s (using 265 data points, chi2=0.15)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,788 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,788 | INFO     | ..............................
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . Timing measurements:
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . get job = 0 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . initial setup = 40 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . payload setup = 98 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . stage-in = 1 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . payload execution = 17784 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . stage-out = 2 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | . log creation = 0 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,789 | INFO     | ..............................
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | 
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | job summary report
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | --------------------------------------------------
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | PanDA job id: 7090631595
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | task id: 49263200
[2026-04-19 11:28:23] 2026-04-19 15:27:15,906 | INFO     | errors: (none)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | pilot state: finished 
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | transexitcode: 0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | exeerrorcode: 0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | exeerrordiag: 
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | exitcode: 0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | exitmsg: OK
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | cpuconsumptiontime: 53522 s
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | nevents: 400
[2026-04-19 11:28:23] 2026-04-19 15:27:15,907 | INFO     | neventsw: 0
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | pid: 1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | pgrp: 1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | corecount: 9
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | event service: False
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | sizes: {0: 2281533, 1: 2281589, 2: 2281617, 3: 2281872, 4: 2281872, 5: 2283658, 17: 2283658, 17887: 2315989, 17889: 2324987, 17891: 2325043, 17894: 2325237}
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | --------------------------------------------------
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | 
[2026-04-19 11:28:23] 2026-04-19 15:27:15,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-19 11:28:23] 2026-04-19 15:27:15,931 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,933 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 11:28:23] 2026-04-19 15:27:15,934 | INFO     | job 7090631595 has completed (purged errors)
[2026-04-19 11:28:23] 2026-04-19 15:27:15,934 | INFO     | overall cleanup function is called
[2026-04-19 11:28:23] 2026-04-19 15:27:16,942 | INFO     | --- collectZombieJob: --- 10, [1586256]
[2026-04-19 11:28:23] 2026-04-19 15:27:16,942 | INFO     | zombie collector waiting for pid 1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:16,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 11:28:23] 2026-04-19 15:27:16,942 | INFO     | collected zombie processes
[2026-04-19 11:28:23] 2026-04-19 15:27:16,943 | INFO     | will attempt to kill all subprocesses of pid=1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:17,263 | INFO     | process IDs to be killed: [1586256] (in reverse order)
[2026-04-19 11:28:23] 2026-04-19 15:27:17,362 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 11:28:23] 2026-04-19 15:27:17,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 11:28:23] 2026-04-19 15:27:17,375 | INFO     | did not find any defunct processes belonging to 1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:17,389 | INFO     | did not find any defunct processes belonging to 1586256
[2026-04-19 11:28:23] 2026-04-19 15:27:17,389 | INFO     | Ready for new job
[2026-04-19 11:28:23] 2026-04-19 15:27:17,391 | INFO     | **************************************
[2026-04-19 11:28:23] 2026-04-19 15:27:17,393 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 11:28:23] 2026-04-19 15:27:17,393 | INFO     | **************************************
[2026-04-19 11:28:23] 2026-04-19 15:27:17,393 | INFO     | 
[2026-04-19 11:28:23] 2026-04-19 15:27:17,395 | INFO     | architecture information:
[2026-04-19 11:28:23] 2026-04-19 15:27:17,395 | INFO     | executing command: cat /etc/os-release
[2026-04-19 11:28:23] 2026-04-19 15:27:17,414 | INFO     | cat /etc/os-release:
[2026-04-19 11:28:23] NAME="CentOS Linux"
[2026-04-19 11:28:23] VERSION="7 (Core)"
[2026-04-19 11:28:23] ID="centos"
[2026-04-19 11:28:23] ID_LIKE="rhel fedora"
[2026-04-19 11:28:23] VERSION_ID="7"
[2026-04-19 11:28:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 11:28:23] ANSI_COLOR="0;31"
[2026-04-19 11:28:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 11:28:23] HOME_URL="https://www.centos.org/"
[2026-04-19 11:28:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 11:28:23] 
[2026-04-19 11:28:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 11:28:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 11:28:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 11:28:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 11:28:23] 
[2026-04-19 11:28:23] 2026-04-19 15:27:17,414 | INFO     | **************************************
[2026-04-19 11:28:23] 2026-04-19 15:27:17,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-19 11:28:23] 2026-04-19 15:27:17,942 | INFO     | sufficient remaining disk space (76476841984 B)
[2026-04-19 11:28:23] 2026-04-19 15:27:17,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 11:28:23] 2026-04-19 15:27:17,942 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 11:28:23] 2026-04-19 15:27:17,942 | INFO     | update_server=False
[2026-04-19 11:28:23] 2026-04-19 15:27:17,943 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 11:28:23] 2026-04-19 15:27:17,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 11:28:23] 2026-04-19 15:27:17,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 11:28:23] 2026-04-19 15:27:17,943 | INFO     | aborting loop
[2026-04-19 11:28:23] 2026-04-19 15:27:18,186 | INFO     | all job control threads have been joined
[2026-04-19 11:28:23] 2026-04-19 15:27:18,407 | INFO     | all data control threads have been joined
[2026-04-19 11:28:23] 2026-04-19 15:27:18,488 | INFO     | all payload control threads have been joined
[2026-04-19 11:28:23] 2026-04-19 15:27:18,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 11:28:23] 2026-04-19 15:27:18,948 | INFO     | [job] retrieve thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:18,949 | INFO     | [job] job monitor thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,192 | INFO     | [job] control thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,309 | INFO     | [job] validate thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,416 | INFO     | [data] copytool_in thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,418 | INFO     | [data] control thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,494 | INFO     | [payload] control thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,627 | INFO     | [payload] failed_post thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,822 | INFO     | [payload] validate_post thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,941 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:19,950 | INFO     | [data] copytool_out thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:20,250 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:20,425 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:20,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 11:28:23] 2026-04-19 15:27:21,926 | INFO     | [job] queue monitor thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:22,903 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:28,084 | INFO     | job.realtimelogging is not enabled
[2026-04-19 11:28:23] 2026-04-19 15:27:29,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 11:28:23] 2026-04-19 15:27:50,215 | INFO     | PID=1566821 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 11:28:23] 2026-04-19 15:27:50,215 | INFO     | .. there are 11 such processes running
[2026-04-19 11:28:23] 2026-04-19 15:27:50,216 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 11:28:23] 2026-04-19 15:27:50,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 11:28:23] 2026-04-19 15:27:50,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 11:28:23] 2026-04-19 15:28:01,383 [wrapper] supervise_pilot (15 min periods counter: 21)
[2026-04-19 11:28:23] 2026-04-19 15:28:16,702 | INFO     | [monitor] cgroup control has ended
[2026-04-19 11:28:23] 2026-04-19 15:28:17,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840792758080)>', '<ExcThread(monitor, started 139840309950208)>']
[2026-04-19 11:28:23] 2026-04-19 15:28:18,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 11:28:23] 2026-04-19 15:28:18,378 | INFO     | [monitor] control thread has ended
[2026-04-19 11:28:23] 2026-04-19 15:28:22,655 | INFO     | all workflow threads have been joined
[2026-04-19 11:28:23] 2026-04-19 15:28:22,655 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 11:28:23] 2026-04-19 15:28:22,656 | INFO     | traces error code: 0
[2026-04-19 11:28:23] 2026-04-19 15:28:22,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 11:28:23] 2026-04-19 15:28:23,230 [wrapper] ==== pilot stdout END ====
[2026-04-19 11:28:23] 2026-04-19 15:28:23,278 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 11:28:23] 2026-04-19 15:28:23,326 [wrapper] pilotpid: 1566821
[2026-04-19 11:28:23] 2026-04-19 15:28:23,352 [wrapper] Pilot exit status: 0
[2026-04-19 11:28:23] 2026-04-19 15:28:23,552 [wrapper] pandaids: 7090631595
[2026-04-19 11:28:23] 2026-04-19 15:28:23,667 [wrapper] cleanup supervisor_pilot 2196881 1566822
[2026-04-19 11:28:23] 2026-04-19 15:28:23,672 [wrapper] Test setup, not cleaning
[2026-04-19 11:28:23] 2026-04-19 15:28:23,677 [wrapper] apfmon messages muted
[2026-04-19 11:28:23] 2026-04-19 15:28:23,681 [wrapper] ==== wrapper stdout END ====
[2026-04-19 11:28:23] 2026-04-19 15:28:23,685 [wrapper] ==== wrapper stderr END ====
[2026-04-19 11:28:23]  *** Error codes and diagnostics ***
[2026-04-19 11:28:23]     "exeErrorCode": 0,
[2026-04-19 11:28:23]     "pilotErrorCode": 0,
[2026-04-19 11:28:23]  *** Listing of results directory ***
[2026-04-19 11:28:23] total 423568
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas    644190 Apr 19 06:19 pilot3.tar.gz
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas      5094 Apr 19 06:20 queuedata.json
[2026-04-19 11:28:23] -rwx------. 1 boincer umatlas     36322 Apr 19 06:20 runpilot2-wrapper.sh
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas       100 Apr 19 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 11:28:23] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 06:26 run_atlas
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas       105 Apr 19 06:26 job.xml
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas 225994227 Apr 19 06:26 EVNT.49263198._001189.pool.root.1
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 06:26 start_atlas.sh
[2026-04-19 11:28:23] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 06:26 shared
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas    656930 Apr 19 06:26 input.tar.gz
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas         0 Apr 19 06:26 boinc_lockfile
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas      2576 Apr 19 06:26 pandaJob.out
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas        57 Apr 19 06:26 setup.sh.local
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas    997326 Apr 19 06:28 agis_schedconf.cvmfs.json
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas       440 Apr 19 06:28 workernode_map.json
[2026-04-19 11:28:23] drwx------. 5 boincer umatlas      4096 Apr 19 06:28 pilot3
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas      6575 Apr 19 11:20 init_data.xml
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas 199836799 Apr 19 11:26 HITS.49263200._069041.pool.root.1
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas       489 Apr 19 11:26 boinc_task_state.xml
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas        95 Apr 19 11:26 pilot_heartbeat.json
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas      1040 Apr 19 11:27 memory_monitor_summary.json
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas   1512404 Apr 19 11:27 agis_ddmendpoints.agis.ALL.json
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas    441501 Apr 19 11:27 log.49263200._069041.job.log.tgz.1
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas      6407 Apr 19 11:27 heartbeat_new.json
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas      6298 Apr 19 11:27 heartbeat.json
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 11:27 boinc_mmap_file
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas        28 Apr 19 11:27 wrapper_checkpoint.txt
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas      4891 Apr 19 11:28 pilotlog.txt
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas   1477169 Apr 19 11:28 log.49263200._069041.job.log.1
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas       357 Apr 19 11:28 output.list
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas       410 Apr 19 11:28 runtime_log
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas   1935360 Apr 19 11:28 result.tar.gz
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas      8954 Apr 19 11:28 runtime_log.err
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas       655 Apr 19 11:28 ac7d294fe3ad.diag
[2026-04-19 11:28:23] -rw-r--r--. 1 boincer umatlas     20883 Apr 19 11:28 stderr.txt
[2026-04-19 11:28:23] HITS file was successfully produced:
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas 199836799 Apr 19 11:26 shared/HITS.pool.root.1
[2026-04-19 11:28:23]  *** Contents of shared directory: ***
[2026-04-19 11:28:23] total 418416
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas 225994227 Apr 19 06:26 ATLAS.root_0
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 06:26 start_atlas.sh
[2026-04-19 11:28:23] -rw-r--r--. 2 boincer umatlas    656930 Apr 19 06:26 input.tar.gz
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas 199836799 Apr 19 11:26 HITS.pool.root.1
[2026-04-19 11:28:23] -rw-------. 1 boincer umatlas   1935360 Apr 19 11:28 result.tar.gz
11:28:24 (1559601): run_atlas exited; CPU time 53990.757689
11:28:24 (1559601): called boinc_finish(0)

</stderr_txt>
]]>

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