Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:09:42 (29775): wrapper (7.7.26015): starting
15:09:42 (29775): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 15:09:42] Arguments: --nthreads 8
[2026-04-19 15:09:42] Threads: 8
[2026-04-19 15:09:42] Checking for CVMFS
[2026-04-19 15:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 15:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 15:09:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 15:09:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 15:09:45] 2.11.2.0 20034 5523 95060 158620 2 54 16027937 25165824 1060 130560 0 1533557 99.644 4160539 24658 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 15:09:45] CVMFS is ok
[2026-04-19 15:09:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 15:09:45] Checking for apptainer binary...
[2026-04-19 15:09:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 15:09:45] Running /usr/bin/apptainer --version
[2026-04-19 15:09:45] apptainer version 1.3.2-1.el7
[2026-04-19 15:09:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 15:10:11] cg-vwn380.simple-grid.lan
[2026-04-19 15:10:11] apptainer works
[2026-04-19 15:10:11] Set ATHENA_PROC_NUMBER=8
[2026-04-19 15:10:11] Set ATHENA_CORE_NUMBER=8
[2026-04-19 15:10:11] Starting ATLAS job with PandaID=7096255729
[2026-04-19 15:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 17:56:34]  *** The last 200 lines of the pilot log: ***
[2026-04-19 17:56:34] 2026-04-19 15:55:48,995 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 17:56:34] 2026-04-19 15:55:48,995 | INFO     | log transfer has been attempted: DONE
[2026-04-19 17:56:34] 2026-04-19 15:55:48,995 | INFO     | job 7096255729 has finished - writing final server update
[2026-04-19 17:56:34] 2026-04-19 15:55:48,995 | INFO     | total number of processed events: 400 (read)
[2026-04-19 17:56:34] 2026-04-19 15:55:48,997 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7096255729/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 17:56:34] 2026-04-19 15:55:48,998 | INFO     | extracted standard info from prmon json
[2026-04-19 17:56:34] 2026-04-19 15:55:48,998 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 17:56:34] 2026-04-19 15:55:48,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 17:56:34] 2026-04-19 15:55:48,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 17:56:34] 2026-04-19 15:55:49,002 | INFO     | fitting pss+swap vs Time
[2026-04-19 17:56:34] 2026-04-19 15:55:49,002 | INFO     | sum of square deviations: 1088905998.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,004 | INFO     | sum of deviations: 65615608462.5
[2026-04-19 17:56:34] 2026-04-19 15:55:49,004 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,004 | INFO     | mean y: 2421587.7565789474
[2026-04-19 17:56:34] 2026-04-19 15:55:49,004 | INFO     | intersect: 2421587.7565789474
[2026-04-19 17:56:34] 2026-04-19 15:55:49,004 | INFO     | chi2: 9.579321436375835
[2026-04-19 17:56:34] 2026-04-19 15:55:49,005 | INFO     | sum of square deviations: 984941258.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,006 | INFO     | sum of deviations: 73687032052.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,006 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,006 | INFO     | mean y: 2433029.700680272
[2026-04-19 17:56:34] 2026-04-19 15:55:49,006 | INFO     | intersect: 2433029.700680272
[2026-04-19 17:56:34] 2026-04-19 15:55:49,006 | INFO     | chi2: 8.942159449647383
[2026-04-19 17:56:34] 2026-04-19 15:55:49,007 | INFO     | current chi2=8.942159449647383 (change=6.6514313248633545 %)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,007 | INFO     | right removable region: 146
[2026-04-19 17:56:34] 2026-04-19 15:55:49,007 | INFO     | sum of square deviations: 984941258.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,008 | INFO     | sum of deviations: 12192665787.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,008 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,008 | INFO     | mean y: 2499896.870748299
[2026-04-19 17:56:34] 2026-04-19 15:55:49,008 | INFO     | intersect: 2499896.870748299
[2026-04-19 17:56:34] 2026-04-19 15:55:49,009 | INFO     | chi2: 3.926935707120577
[2026-04-19 17:56:34] 2026-04-19 15:55:49,009 | INFO     | current chi2=3.926935707120577 (change=59.00611819738389 %)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,009 | INFO     | sum of square deviations: 887813855.5
[2026-04-19 17:56:34] 2026-04-19 15:55:49,010 | INFO     | sum of deviations: -27800208472.5
[2026-04-19 17:56:34] 2026-04-19 15:55:49,010 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,010 | INFO     | mean y: 2562548.2183098593
[2026-04-19 17:56:34] 2026-04-19 15:55:49,010 | INFO     | intersect: 2562548.2183098593
[2026-04-19 17:56:34] 2026-04-19 15:55:49,011 | INFO     | chi2: 1.0575976178919682
[2026-04-19 17:56:34] 2026-04-19 15:55:49,011 | INFO     | current chi2=1.0575976178919682 (change=73.06811985808011 %)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,011 | INFO     | sum of square deviations: 797291228.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,012 | INFO     | sum of deviations: -33322037449.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,012 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,012 | INFO     | mean y: 2571677.4452554747
[2026-04-19 17:56:34] 2026-04-19 15:55:49,012 | INFO     | intersect: 2571677.4452554747
[2026-04-19 17:56:34] 2026-04-19 15:55:49,013 | INFO     | chi2: 0.91632412955366
[2026-04-19 17:56:34] 2026-04-19 15:55:49,013 | INFO     | current chi2=0.91632412955366 (change=13.357962040411758 %)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,013 | INFO     | left removable region: 15
[2026-04-19 17:56:34] 2026-04-19 15:55:49,013 | INFO     | sum of square deviations: 697054930.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,014 | INFO     | sum of deviations: -22658691681.999977
[2026-04-19 17:56:34] 2026-04-19 15:55:49,014 | INFO     | mean x (centered): 0.0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,014 | INFO     | mean y: 2590532.717557252
[2026-04-19 17:56:34] 2026-04-19 15:55:49,014 | INFO     | intersect: 2590532.717557252
[2026-04-19 17:56:34] 2026-04-19 15:55:49,015 | INFO     | chi2: 0.11384494117485254
[2026-04-19 17:56:34] 2026-04-19 15:55:49,015 | INFO     | current memory leak: -32.51 B/s (using 131 data points, chi2=0.11)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,015 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,015 | INFO     | ..............................
[2026-04-19 17:56:34] 2026-04-19 15:55:49,015 | INFO     | . Timing measurements:
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . get job = 0 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . initial setup = 98 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . payload setup = 200 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . stage-in = 0 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . payload execution = 9353 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . stage-out = 0 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | . log creation = 0 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,016 | INFO     | ..............................
[2026-04-19 17:56:34] 2026-04-19 15:55:49,131 | INFO     | 
[2026-04-19 17:56:34] 2026-04-19 15:55:49,131 | INFO     | job summary report
[2026-04-19 17:56:34] 2026-04-19 15:55:49,131 | INFO     | --------------------------------------------------
[2026-04-19 17:56:34] 2026-04-19 15:55:49,131 | INFO     | PanDA job id: 7096255729
[2026-04-19 17:56:34] 2026-04-19 15:55:49,131 | INFO     | task id: 49545114
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | errors: (none)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | pilot state: finished 
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | transexitcode: 0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | exeerrorcode: 0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | exeerrordiag: 
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | exitcode: 0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | exitmsg: OK
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | cpuconsumptiontime: 52635 s
[2026-04-19 17:56:34] 2026-04-19 15:55:49,132 | INFO     | nevents: 400
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | neventsw: 0
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | pid: 5811
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | pgrp: 5811
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | corecount: 8
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | event service: False
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | sizes: {0: 2281563, 1: 2281647, 2: 2283476, 12: 2283476, 9558: 2311969, 9559: 2311968, 9560: 2321150, 9563: 2321206, 9565: 2321464}
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | --------------------------------------------------
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | 
[2026-04-19 17:56:34] 2026-04-19 15:55:49,133 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-19 17:56:34] 2026-04-19 15:55:49,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,164 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,166 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 17:56:34] 2026-04-19 15:55:49,167 | INFO     | job 7096255729 has completed (purged errors)
[2026-04-19 17:56:34] 2026-04-19 15:55:49,167 | INFO     | overall cleanup function is called
[2026-04-19 17:56:34] 2026-04-19 15:55:50,175 | INFO     | --- collectZombieJob: --- 10, [5811]
[2026-04-19 17:56:34] 2026-04-19 15:55:50,175 | INFO     | zombie collector waiting for pid 5811
[2026-04-19 17:56:34] 2026-04-19 15:55:50,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 17:56:34] 2026-04-19 15:55:50,176 | INFO     | collected zombie processes
[2026-04-19 17:56:34] 2026-04-19 15:55:50,176 | INFO     | will attempt to kill all subprocesses of pid=5811
[2026-04-19 17:56:34] 2026-04-19 15:55:50,239 | INFO     | process IDs to be killed: [5811] (in reverse order)
[2026-04-19 17:56:34] 2026-04-19 15:55:50,288 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 17:56:34] 2026-04-19 15:55:50,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 17:56:34] 2026-04-19 15:55:50,290 | INFO     | did not find any defunct processes belonging to 5811
[2026-04-19 17:56:34] 2026-04-19 15:55:50,292 | INFO     | did not find any defunct processes belonging to 5811
[2026-04-19 17:56:34] 2026-04-19 15:55:50,292 | INFO     | Ready for new job
[2026-04-19 17:56:34] 2026-04-19 15:55:50,294 | INFO     | **************************************
[2026-04-19 17:56:34] 2026-04-19 15:55:50,294 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 17:56:34] 2026-04-19 15:55:50,294 | INFO     | **************************************
[2026-04-19 17:56:34] 2026-04-19 15:55:50,294 | INFO     | 
[2026-04-19 17:56:34] 2026-04-19 15:55:50,295 | INFO     | pilot is running in a VM
[2026-04-19 17:56:34] 2026-04-19 15:55:50,295 | INFO     | architecture information:
[2026-04-19 17:56:34] 2026-04-19 15:55:50,296 | INFO     | executing command: cat /etc/os-release
[2026-04-19 17:56:34] 2026-04-19 15:55:50,321 | INFO     | cat /etc/os-release:
[2026-04-19 17:56:34] NAME="CentOS Linux"
[2026-04-19 17:56:34] VERSION="7 (Core)"
[2026-04-19 17:56:34] ID="centos"
[2026-04-19 17:56:34] ID_LIKE="rhel fedora"
[2026-04-19 17:56:34] VERSION_ID="7"
[2026-04-19 17:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 17:56:34] ANSI_COLOR="0;31"
[2026-04-19 17:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 17:56:34] HOME_URL="https://www.centos.org/"
[2026-04-19 17:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 17:56:34] 
[2026-04-19 17:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 17:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 17:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 17:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 17:56:34] 
[2026-04-19 17:56:34] 2026-04-19 15:55:50,322 | INFO     | **************************************
[2026-04-19 17:56:34] 2026-04-19 15:55:50,824 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-19 17:56:34] 2026-04-19 15:55:50,854 | INFO     | sufficient remaining disk space (497848156160 B)
[2026-04-19 17:56:34] 2026-04-19 15:55:50,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 17:56:34] 2026-04-19 15:55:50,854 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 17:56:34] 2026-04-19 15:55:50,854 | INFO     | update_server=False
[2026-04-19 17:56:34] 2026-04-19 15:55:50,855 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 17:56:34] 2026-04-19 15:55:50,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 17:56:34] 2026-04-19 15:55:50,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 17:56:34] 2026-04-19 15:55:50,856 | INFO     | aborting loop
[2026-04-19 17:56:34] 2026-04-19 15:55:50,899 | INFO     | all data control threads have been joined
[2026-04-19 17:56:34] 2026-04-19 15:55:51,733 | INFO     | all job control threads have been joined
[2026-04-19 17:56:34] 2026-04-19 15:55:51,859 | INFO     | [job] retrieve thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:51,860 | INFO     | [job] queue monitor thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:51,862 | INFO     | [job] job monitor thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:51,905 | INFO     | [data] control thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:52,010 | INFO     | [payload] validate_post thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:52,044 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:52,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 17:56:34] 2026-04-19 15:55:52,139 | INFO     | all payload control threads have been joined
[2026-04-19 17:56:34] 2026-04-19 15:55:52,280 | INFO     | [job] validate thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:52,442 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:52,738 | INFO     | [job] control thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:53,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 17:56:34] 2026-04-19 15:55:53,069 | INFO     | [data] copytool_in thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:53,145 | INFO     | [payload] control thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:53,329 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:53,418 | INFO     | [payload] failed_post thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:54,063 | INFO     | [data] copytool_out thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:55:57,072 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:56:01,565 | INFO     | job.realtimelogging is not enabled
[2026-04-19 17:56:34] 2026-04-19 15:56:02,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 17:56:34] 2026-04-19 15:56:20,428 | INFO     | PID=1335 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-19 17:56:34] 2026-04-19 15:56:20,428 | INFO     | .. there are 2 such processes running
[2026-04-19 17:56:34] 2026-04-19 15:56:20,428 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 17:56:34] 2026-04-19 15:56:20,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 17:56:34] 2026-04-19 15:56:20,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 17:56:34] 2026-04-19 15:56:27,429 | INFO     | [monitor] cgroup control has ended
[2026-04-19 17:56:34] 2026-04-19 15:56:29,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696837556032)>', '<ExcThread(monitor, started 139695950391040)>']
[2026-04-19 17:56:34] 2026-04-19 15:56:29,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 17:56:34] 2026-04-19 15:56:29,471 | INFO     | [monitor] control thread has ended
[2026-04-19 17:56:34] 2026-04-19 15:56:34,245 | INFO     | all workflow threads have been joined
[2026-04-19 17:56:34] 2026-04-19 15:56:34,246 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 17:56:34] 2026-04-19 15:56:34,246 | INFO     | traces error code: 0
[2026-04-19 17:56:34] 2026-04-19 15:56:34,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 17:56:34] 2026-04-19 15:56:34,387 [wrapper] ==== pilot stdout END ====
[2026-04-19 17:56:34] 2026-04-19 15:56:34,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 17:56:34] 2026-04-19 15:56:34,401 [wrapper] pilotpid: 1335
[2026-04-19 17:56:34] 2026-04-19 15:56:34,406 [wrapper] Pilot exit status: 0
[2026-04-19 17:56:34] 2026-04-19 15:56:34,426 [wrapper] pandaids: 7096255729
[2026-04-19 17:56:34] 2026-04-19 15:56:34,466 [wrapper] cleanup supervisor_pilot 26820 1336
[2026-04-19 17:56:34] 2026-04-19 15:56:34,471 [wrapper] Test setup, not cleaning
[2026-04-19 17:56:34] 2026-04-19 15:56:34,483 [wrapper] apfmon messages muted
[2026-04-19 17:56:34] 2026-04-19 15:56:34,494 [wrapper] ==== wrapper stdout END ====
[2026-04-19 17:56:34] 2026-04-19 15:56:34,500 [wrapper] ==== wrapper stderr END ====
[2026-04-19 17:56:34]  *** Error codes and diagnostics ***
[2026-04-19 17:56:34]     "exeErrorCode": 0,
[2026-04-19 17:56:34]     "pilotErrorCode": 0,
[2026-04-19 17:56:34]  *** Listing of results directory ***
[2026-04-19 17:56:34] total 459716
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc      5094 Apr 19 12:19 queuedata.json
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc    644190 Apr 19 12:19 pilot3.tar.gz
[2026-04-19 17:56:34] -rwx------. 1 boinc boinc     36322 Apr 19 12:19 runpilot2-wrapper.sh
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc       100 Apr 19 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 17:56:34] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 15:09 run_atlas
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc       105 Apr 19 15:09 job.xml
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc 278474266 Apr 19 15:09 EVNT.49539591._000035.pool.root.1
[2026-04-19 17:56:34] drwxrwx--x. 2 boinc boinc        68 Apr 19 15:09 shared
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc    656929 Apr 19 15:09 input.tar.gz
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc      6306 Apr 19 15:09 init_data.xml
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc     15665 Apr 19 15:09 start_atlas.sh
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc         0 Apr 19 15:09 boinc_lockfile
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc      2600 Apr 19 15:10 pandaJob.out
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc   1512404 Apr 19 15:14 agis_ddmendpoints.agis.ALL.json
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc       415 Apr 19 15:16 workernode_map.json
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc    997326 Apr 19 15:16 agis_schedconf.cvmfs.json
[2026-04-19 17:56:34] drwx------. 5 boinc boinc      4096 Apr 19 15:16 pilot3
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc 185700452 Apr 19 17:55 HITS.49545114._017838.pool.root.1
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc       487 Apr 19 17:55 boinc_task_state.xml
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc      1019 Apr 19 17:55 memory_monitor_summary.json
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc        95 Apr 19 17:55 pilot_heartbeat.json
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc    359684 Apr 19 17:55 log.49545114._017838.job.log.tgz.1
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc      6341 Apr 19 17:55 heartbeat_new.json
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc      6232 Apr 19 17:55 heartbeat.json
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc      8192 Apr 19 17:56 boinc_mmap_file
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc        28 Apr 19 17:56 wrapper_checkpoint.txt
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc      4950 Apr 19 17:56 pilotlog.txt
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc    907609 Apr 19 17:56 log.49545114._017838.job.log.1
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc       357 Apr 19 17:56 output.list
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc       410 Apr 19 17:56 runtime_log
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc   1280000 Apr 19 17:56 result.tar.gz
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc      8437 Apr 19 17:56 runtime_log.err
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc       653 Apr 19 17:56 ac4cbb6c0226.diag
[2026-04-19 17:56:34] -rw-r--r--. 1 boinc boinc     20605 Apr 19 17:56 stderr.txt
[2026-04-19 17:56:34] HITS file was successfully produced:
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc 185700452 Apr 19 17:55 shared/HITS.pool.root.1
[2026-04-19 17:56:34]  *** Contents of shared directory: ***
[2026-04-19 17:56:34] total 455212
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc 278474266 Apr 19 15:09 ATLAS.root_0
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc    656929 Apr 19 15:09 input.tar.gz
[2026-04-19 17:56:34] -rw-r--r--. 2 boinc boinc     15665 Apr 19 15:09 start_atlas.sh
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc 185700452 Apr 19 17:55 HITS.pool.root.1
[2026-04-19 17:56:34] -rw-------. 1 boinc boinc   1280000 Apr 19 17:56 result.tar.gz
17:56:36 (29775): run_atlas exited; CPU time 52717.079060
17:56:36 (29775): called boinc_finish(0)

</stderr_txt>
]]>

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