Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-24 10:06:06 (157077): vboxwrapper version 26210
2026-04-24 10:06:06 (157077): BOINC client version: 7.16.6
2026-04-24 10:06:06 (157077): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-04-24 10:06:06 (157077): Successfully copied 'init_data.xml' to the shared directory.
2026-04-24 10:06:06 (157077): Create VM. (boinc_5a93eb77c7ddfb98, slot#0)
2026-04-24 10:06:06 (157077): Setting Memory Size for VM. (4800MB)
2026-04-24 10:06:06 (157077): Setting CPU Count for VM. (8)
2026-04-24 10:06:07 (157077): Setting Chipset Options for VM.
2026-04-24 10:06:07 (157077): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-24 10:06:07 (157077): Setting Boot Options for VM.
2026-04-24 10:06:07 (157077): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-24 10:06:07 (157077): Enabling VM Network Access.
2026-04-24 10:06:07 (157077): Disabling USB Support for VM.
2026-04-24 10:06:08 (157077): Disabling COM Port Support for VM.
2026-04-24 10:06:08 (157077): Disabling LPT Port Support for VM.
2026-04-24 10:06:08 (157077): Disabling Audio Support for VM.
2026-04-24 10:06:08 (157077): Disabling Clipboard Support for VM.
2026-04-24 10:06:08 (157077): Disabling Drag and Drop Support for VM.
2026-04-24 10:06:08 (157077): Adding storage controller(s) to VM.
2026-04-24 10:06:08 (157077): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-24 10:06:09 (157077): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-24 10:06:09 (157077): forwarding host port 60191 to guest port 80
2026-04-24 10:06:09 (157077): Enabling remote desktop for VM.
2026-04-24 10:06:10 (157077): Enabling shared directory for VM.
2026-04-24 10:06:10 (157077): Starting VM using VBoxManage interface. (boinc_5a93eb77c7ddfb98, slot#0)
2026-04-24 10:06:11 (157077): Successfully started VM. (PID = '157517')
2026-04-24 10:06:11 (157077): Reporting VM Process ID to BOINC.
2026-04-24 10:06:11 (157077): Guest Log: BIOS: VirtualBox 6.1.50
2026-04-24 10:06:11 (157077): Guest Log: CPUID EDX: 0x178bfbff
2026-04-24 10:06:11 (157077): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-24 10:06:11 (157077): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-24 10:06:11 (157077): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-24 10:06:11 (157077): Detected: Web Application Enabled (http://localhost:60191)
2026-04-24 10:06:11 (157077): Detected: Remote Desktop Enabled (localhost:48399)
2026-04-24 10:06:11 (157077): Preference change detected
2026-04-24 10:06:11 (157077): Setting CPU throttle for VM. (90%)
2026-04-24 10:06:11 (157077): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 10:06:13 (157077): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-24 10:06:13 (157077): Guest Log: BIOS: Booting from Hard Disk...
2026-04-24 10:06:16 (157077): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-24 10:06:16 (157077): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-24 10:06:16 (157077): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-24 10:06:30 (157077): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-24 10:06:30 (157077): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-24 10:06:49 (157077): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000470 main     Log opened 2026-04-24T16:06:46.966793000Z
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000675 main     OS Product: Linux
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000750 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000811 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000873 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000874 main     Process ID: 1366
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.000876 main     Package type: LINUX_64BITS_GENERIC
2026-04-24 10:06:49 (157077): Guest Log: 00:00:00.003522 main     5.2.32 r132073 started. Verbose level = 0
2026-04-24 10:06:49 (157077): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-24 10:06:49 (157077): Guest Log: [INFO] Mounting shared directory
2026-04-24 10:06:50 (157077): Guest Log: [INFO] Checking for init_data.xml
2026-04-24 10:08:02 (157077): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-24 10:08:02 (157077): Guest Log: [INFO] Detected branch: prod
2026-04-24 10:08:02 (157077): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-24 10:08:02 (157077): Guest Log: Copying input files
2026-04-24 10:08:03 (157077): Guest Log: Copied input files into RunAtlas.
2026-04-24 10:08:03 (157077): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-24 10:08:03 (157077): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-24 10:08:03 (157077): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-24 10:08:03 (157077): Guest Log: Further information can be found at the LHC@home message board.
2026-04-24 10:08:14 (157077): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-24 10:08:14 (157077): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-24 10:08:14 (157077): Guest Log: 2.6.3.0 1664 0 30164 158815 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-24 10:08:18 (157077): Guest Log: copied the webapp to /var/www
2026-04-24 10:08:18 (157077): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-24 10:08:18 (157077): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-24 10:08:18 (157077): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-24 10:08:18 (157077): Guest Log:  *** Starting ATLAS job. (PandaID=7089522888 taskID=49263200) ***
2026-04-24 10:28:38 (157077): Preference change detected
2026-04-24 10:28:38 (157077): Setting CPU throttle for VM. (90%)
2026-04-24 10:28:39 (157077): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 11:28:41 (157077): Preference change detected
2026-04-24 11:28:41 (157077): Setting CPU throttle for VM. (90%)
2026-04-24 11:28:41 (157077): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 11:45:17 (157077): Status Report: Elapsed Time: '6000.000000'
2026-04-24 11:45:17 (157077): Status Report: CPU Time: '38892.050000'
2026-04-24 12:28:43 (157077): Preference change detected
2026-04-24 12:28:43 (157077): Setting CPU throttle for VM. (90%)
2026-04-24 12:28:43 (157077): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 13:24:23 (157077): Status Report: Elapsed Time: '12000.000000'
2026-04-24 13:24:23 (157077): Status Report: CPU Time: '81361.400000'
2026-04-24 13:28:45 (157077): Preference change detected
2026-04-24 13:28:45 (157077): Setting CPU throttle for VM. (90%)
2026-04-24 13:28:46 (157077): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 13:59:07 (157077): Guest Log:  *** Job finished ***
2026-04-24 13:59:07 (157077): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:47,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:47,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:57,328 | INFO     | [monitor] cgroup control has ended
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:59,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797596817216)>', '<ExcThread(monitor, started 139796269750016)>']
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:59,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:58:59,928 | INFO     | [monitor] control thread has ended
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,049 | INFO     | all workflow threads have been joined
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,050 | INFO     | end of generic workflow (traces error code: 0)
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,050 | INFO     | traces error code: 0
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,154 [wrapper] ==== pilot stdout END ====
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,166 [wrapper] ==== wrapper stdout RESUME ====
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,178 [wrapper] pilotpid: 6107
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,189 [wrapper] Pilot exit status: 0
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,360 [wrapper] pandaids: 7089522888
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,445 [wrapper] cleanup supervisor_pilot 28394 6108
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,457 [wrapper] Test setup, not cleaning
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,469 [wrapper] apfmon messages muted
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,480 [wrapper] ==== wrapper stdout END ====
2026-04-24 13:59:07 (157077): Guest Log: 2026-04-24 19:59:04,492 [wrapper] ==== wrapper stderr END ====
2026-04-24 13:59:07 (157077): Guest Log:  *** Error codes and diagnostics ***
2026-04-24 13:59:07 (157077): Guest Log:     "exeErrorCode": 0,
2026-04-24 13:59:07 (157077): Guest Log:     "pilotErrorCode": 0,
2026-04-24 13:59:07 (157077): Guest Log:  *** Listing of results directory ***
2026-04-24 13:59:07 (157077): Guest Log: total 196908
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 19 09:43 pilot3.tar.gz
2026-04-24 13:59:07 (157077): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 19 10:06 runpilot2-wrapper.sh
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 19 10:06 queuedata.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas      6121 Apr 24 16:08 init_data.xml
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas    656931 Apr 24 16:08 input.tar.gz
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas     15665 Apr 24 16:08 start_atlas.sh
2026-04-24 13:59:07 (157077): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 24 16:08 EVNT.49263198._001795.pool.root.1 -> /data/./ATLAS.root_0
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas      2577 Apr 24 16:08 pandaJob.out
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas    997606 Apr 24 16:09 agis_schedconf.cvmfs.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas       427 Apr 24 16:09 workernode_map.json
2026-04-24 13:59:07 (157077): Guest Log: drwx------. 5 atlas atlas      4096 Apr 24 16:09 pilot3
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas 194427240 Apr 24 19:57 HITS.49263200._063263.pool.root.1
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas      1036 Apr 24 19:58 memory_monitor_summary.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 24 19:58 agis_ddmendpoints.agis.ALL.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas    399644 Apr 24 19:58 log.49263200._063263.job.log.tgz.1
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas      6401 Apr 24 19:58 heartbeat_new.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas      6292 Apr 24 19:58 heartbeat.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas        95 Apr 24 19:58 pilot_heartbeat.json
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas      4800 Apr 24 19:59 pilotlog.txt
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas   1215375 Apr 24 19:59 log.49263200._063263.job.log.1
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas       357 Apr 24 19:59 output.list
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 24 19:59 runtime_log
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas   1628160 Apr 24 19:59 result.tar.gz
2026-04-24 13:59:07 (157077): Guest Log: -rw-r--r--. 1 atlas atlas      8386 Apr 24 19:59 runtime_log.err
2026-04-24 13:59:07 (157077): Guest Log: -rw-------. 1 atlas atlas       664 Apr 24 19:59 a9320819e2b2.diag
2026-04-24 13:59:08 (157077): Guest Log: Looking for outputfile HITS.49263200._063263.pool.root.1
2026-04-24 13:59:08 (157077): Guest Log: HITS file was successfully produced
2026-04-24 13:59:08 (157077): Guest Log: -rw-------. 1 atlas atlas 194427240 Apr 24 19:57 /home/atlas/RunAtlas/HITS.49263200._063263.pool.root.1
2026-04-24 13:59:08 (157077): Guest Log: Successfully finished the ATLAS job!
2026-04-24 13:59:08 (157077): Guest Log: Copying the results back to the shared directory!
2026-04-24 13:59:08 (157077): Guest Log:  *** Contents of shared directory: ***
2026-04-24 13:59:08 (157077): Guest Log: total 220452
2026-04-24 13:59:08 (157077): Guest Log: -rw-r--r--. 1 root root 223426626 Apr 24 16:06 ATLAS.root_0
2026-04-24 13:59:08 (157077): Guest Log: -rw-r--r--. 1 root root      6121 Apr 24 16:06 init_data.xml
2026-04-24 13:59:08 (157077): Guest Log: -rw-r--r--. 1 root root    656931 Apr 24 16:06 input.tar.gz
2026-04-24 13:59:08 (157077): Guest Log: -rw-r--r--. 1 root root   1628160 Apr 24 19:59 result.tar.gz
2026-04-24 13:59:08 (157077): Guest Log: -rw-r--r--. 1 root root     15665 Apr 24 16:06 start_atlas.sh
2026-04-24 13:59:08 (157077): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-24 13:59:08 (157077): VM Completion File Detected.
2026-04-24 13:59:08 (157077): Powering off VM.
2026-04-24 13:59:09 (157077): Successfully stopped VM.
2026-04-24 13:59:09 (157077): Deregistering VM. (boinc_5a93eb77c7ddfb98, slot#0)
2026-04-24 13:59:09 (157077): Removing network bandwidth throttle group from VM.
2026-04-24 13:59:09 (157077): Removing VM from VirtualBox.
2026-04-24 13:59:14 (157077): called boinc_finish(0)

</stderr_txt>
]]>

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