Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:13:18 (921347): wrapper (7.7.26015): starting
20:13:18 (921347): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 20:13:18] Arguments: --nthreads 4
[2026-04-21 20:13:18] Threads: 4
[2026-04-21 20:13:18] Checking for CVMFS
[2026-04-21 20:13:18] No cvmfs_config command found, will try listing directly
[2026-04-21 20:13:18] CVMFS is ok
[2026-04-21 20:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 20:13:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 20:13:18] Further information can be found at the LHC@home message board.
[2026-04-21 20:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 20:13:18] Checking for apptainer binary...
[2026-04-21 20:13:18] which: no apptainer in ((null))
[2026-04-21 20:13:18] apptainer is not installed, using version from CVMFS
[2026-04-21 20:13:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 20:13:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-04-21 20:13:18] apptainer works
[2026-04-21 20:13:18] Set ATHENA_PROC_NUMBER=4
[2026-04-21 20:13:18] Set ATHENA_CORE_NUMBER=4
[2026-04-21 20:13:18] Starting ATLAS job with PandaID=7087256777
[2026-04-21 20:13:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:16:39]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | INFO     | will not add max space = 0 B to job metrics
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | WARNING  | wrong length of table data, x=[1776795238.0], y=[13913.0] (must be same and length>=4)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . Timing measurements:
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . get job = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . initial setup = 5 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . payload setup = 9 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-in = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . payload execution = 14 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-out = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . log creation = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-7087256777/pilotlog.txt
[2026-04-21 20:16:39] 2026-04-21 18:16:08,113 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-04-21 20:16:39] - Log from pilotlog.txt -
[2026-04-21 20:16:39] 2026-04-21 18:16:08,095 | INFO     | extracted standard info from prmon json
[2026-04-21 20:16:39] 2026-04-21 18:16:08,095 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | found no stored workdir sizes
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | INFO     | will not add max space = 0 B to job metrics
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | WARNING  | wrong length of table data, x=[1776795238.0], y=[13913.0] (must be same and length>=4)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . Timing measurements:
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . get job = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . initial setup = 5 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . payload setup = 9 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-in = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . payload execution = 14 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-out = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . log creation = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-7087256777/pilotlog.txt
[2026-04-21 20:16:39] 2026-04-21 18:16:08,113 | WARNING  | 
[2026-04-21 20:16:39] [begin log extracts]
[2026-04-21 20:16:39] - Log from pilotlog.txt -
[2026-04-21 20:16:39] 2026-04-21 18:16:08,095 | INFO     | extracted standard info from prmon json
[2026-04-21 20:16:39] 2026-04-21 18:16:08,095 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | WARNING  | found no stored workdir sizes
[2026-04-21 20:16:39] 2026-04-21 18:16:08,096 | INFO     | will not add max space = 0 B to job metrics
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | WARNING  | wrong length of table data, x=[1776795238.0], y=[13913.0] (must be same and length>=4)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . Timing measurements:
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . get job = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . initial setup = 5 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,097 | INFO     | . payload setup = 9 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-in = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . payload execution = 14 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . stage-out = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | . log creation = 0 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | ..............................
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-04-21 20:16:39] 2026-04-21 18:16:08,098 | INFO     | executing command: tail -n 20 /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-7087256777/pilotlog.txt
[2026-04-21 20:16:39] [end log extracts]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,114 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,114 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: File EVNT.492
[2026-04-21 20:16:39] 2026-04-21 18:16:08,375 | INFO     | 
[2026-04-21 20:16:39] 2026-04-21 18:16:08,376 | INFO     | job summary report
[2026-04-21 20:16:39] 2026-04-21 18:16:08,376 | INFO     | --------------------------------------------------
[2026-04-21 20:16:39] 2026-04-21 18:16:08,376 | INFO     | PanDA job id: 7087256777
[2026-04-21 20:16:39] 2026-04-21 18:16:08,376 | INFO     | task id: 49263191
[2026-04-21 20:16:39] 2026-04-21 18:16:08,376 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-04-21 20:14:04,321 CRITICAL Transform executor raised TransformValidationExceptio
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | pilot state: failed 
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | transexitcode: 66
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | exeerrorcode: 66
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | exeerrordiag: File EVNT.49263189._001270.pool.root.1 did not pass corruption test
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | exitcode: 66
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | exitmsg: File EVNT.49263189._001270.pool.root.1 did not pass corruption test
[2026-04-21 20:16:39] 2026-04-21 18:16:08,377 | INFO     | cpuconsumptiontime: 16 s
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | nevents: 0
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | neventsw: 0
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | pid: 938141
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | pgrp: 938141
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | corecount: 4
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | event service: False
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | sizes: {0: 2274674, 1: 2276503, 11: 2276503, 27: 2292658, 28: 2296992, 144: 2297130}
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | --------------------------------------------------
[2026-04-21 20:16:39] 2026-04-21 18:16:08,378 | INFO     | 
[2026-04-21 20:16:39] 2026-04-21 18:16:08,379 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/2
[2026-04-21 20:16:39] 2026-04-21 18:16:08,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:16:39] 2026-04-21 18:16:08,400 | INFO     | job 7087256777 has completed (purged errors)
[2026-04-21 20:16:39] 2026-04-21 18:16:08,401 | INFO     | overall cleanup function is called
[2026-04-21 20:16:39] 2026-04-21 18:16:09,407 | INFO     | --- collectZombieJob: --- 10, [938141]
[2026-04-21 20:16:39] 2026-04-21 18:16:09,407 | INFO     | zombie collector waiting for pid 938141
[2026-04-21 20:16:39] 2026-04-21 18:16:09,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:16:39] 2026-04-21 18:16:09,407 | INFO     | collected zombie processes
[2026-04-21 20:16:39] 2026-04-21 18:16:09,407 | INFO     | will attempt to kill all subprocesses of pid=938141
[2026-04-21 20:16:39] 2026-04-21 18:16:09,633 | INFO     | PID=927557 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 20:16:39] 2026-04-21 18:16:09,634 | INFO     | .. there are 5 such processes running
[2026-04-21 20:16:39] 2026-04-21 18:16:09,773 | INFO     | process IDs to be killed: [938141] (in reverse order)
[2026-04-21 20:16:39] 2026-04-21 18:16:09,846 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:16:39] 2026-04-21 18:16:09,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:16:39] 2026-04-21 18:16:09,853 | INFO     | did not find any defunct processes belonging to 938141
[2026-04-21 20:16:39] 2026-04-21 18:16:09,860 | INFO     | did not find any defunct processes belonging to 938141
[2026-04-21 20:16:39] 2026-04-21 18:16:09,860 | INFO     | Ready for new job
[2026-04-21 20:16:39] 2026-04-21 18:16:09,862 | INFO     | **************************************
[2026-04-21 20:16:39] 2026-04-21 18:16:09,862 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:16:39] 2026-04-21 18:16:09,863 | INFO     | **************************************
[2026-04-21 20:16:39] 2026-04-21 18:16:09,863 | INFO     | 
[2026-04-21 20:16:39] 2026-04-21 18:16:09,865 | INFO     | architecture information:
[2026-04-21 20:16:39] 2026-04-21 18:16:09,865 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:16:39] 2026-04-21 18:16:09,877 | INFO     | cat /etc/os-release:
[2026-04-21 20:16:39] NAME="CentOS Linux"
[2026-04-21 20:16:39] VERSION="7 (Core)"
[2026-04-21 20:16:39] ID="centos"
[2026-04-21 20:16:39] ID_LIKE="rhel fedora"
[2026-04-21 20:16:39] VERSION_ID="7"
[2026-04-21 20:16:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:16:39] ANSI_COLOR="0;31"
[2026-04-21 20:16:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:16:39] HOME_URL="https://www.centos.org/"
[2026-04-21 20:16:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:16:39] 
[2026-04-21 20:16:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:16:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:16:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:16:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:16:39] 
[2026-04-21 20:16:39] 2026-04-21 18:16:09,878 | INFO     | **************************************
[2026-04-21 20:16:39] 2026-04-21 18:16:10,379 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/2
[2026-04-21 20:16:39] 2026-04-21 18:16:10,393 | INFO     | sufficient remaining disk space (141518962688 B)
[2026-04-21 20:16:39] 2026-04-21 18:16:10,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:16:39] 2026-04-21 18:16:10,393 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:16:39] 2026-04-21 18:16:10,393 | INFO     | update_server=False
[2026-04-21 20:16:39] 2026-04-21 18:16:10,393 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:16:39] 2026-04-21 18:16:10,394 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-21 20:16:39] 2026-04-21 18:16:10,394 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:16:39] 2026-04-21 18:16:10,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:16:39] 2026-04-21 18:16:10,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:16:39] 2026-04-21 18:16:10,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:16:39] 2026-04-21 18:16:10,766 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 20:16:39] 2026-04-21 18:16:10,766 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 20:16:39] 2026-04-21 18:16:10,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:16:39] 2026-04-21 18:16:10,766 | INFO     | will abort loop
[2026-04-21 20:16:39] 2026-04-21 18:16:10,827 | INFO     | all data control threads have been joined
[2026-04-21 20:16:39] 2026-04-21 18:16:11,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:16:39] 2026-04-21 18:16:11,025 | INFO     | all payload control threads have been joined
[2026-04-21 20:16:39] 2026-04-21 18:16:11,399 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:11,460 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:11,536 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:11,652 | INFO     | all job control threads have been joined
[2026-04-21 20:16:39] 2026-04-21 18:16:11,766 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:11,771 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:11,833 | INFO     | [data] control thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,031 | INFO     | [payload] control thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,447 | INFO     | [job] validate thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,462 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,491 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,518 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,657 | INFO     | [job] control thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,769 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:12,892 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:13,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:16:39] 2026-04-21 18:16:14,246 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:15,015 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:16:39] 2026-04-21 18:16:33,109 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:16:39] 2026-04-21 18:16:34,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23366516500288)>', '<ExcThread(monitor, started 23366278067968)>']
[2026-04-21 20:16:39] 2026-04-21 18:16:34,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:16:39] 2026-04-21 18:16:34,507 | INFO     | [monitor] control thread has ended
[2026-04-21 20:16:39] 2026-04-21 18:16:39,453 | INFO     | all workflow threads have been joined
[2026-04-21 20:16:39] 2026-04-21 18:16:39,453 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:16:39] 2026-04-21 18:16:39,453 | INFO     | traces error code: 0
[2026-04-21 20:16:39] 2026-04-21 18:16:39,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:16:39] 2026-04-21 18:16:39,570 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:16:39] 2026-04-21 18:16:39,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:16:39] 2026-04-21 18:16:39,575 [wrapper] pilotpid: 927557
[2026-04-21 20:16:39] 2026-04-21 18:16:39,577 [wrapper] Pilot exit status: 0
[2026-04-21 20:16:39] 2026-04-21 18:16:39,587 [wrapper] pandaids: 7087256777
[2026-04-21 20:16:39] 2026-04-21 18:16:39,634 [wrapper] cleanup supervisor_pilot  927571 927558
[2026-04-21 20:16:39] 2026-04-21 18:16:39,637 [wrapper] Test setup, not cleaning
[2026-04-21 20:16:39] 2026-04-21 18:16:39,640 [wrapper] apfmon messages muted
[2026-04-21 20:16:39] 2026-04-21 18:16:39,642 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:16:39] 2026-04-21 18:16:39,644 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:16:39]  *** Error codes and diagnostics ***
[2026-04-21 20:16:39]     "exeErrorCode": 66,
[2026-04-21 20:16:39]     "exeErrorDiag": "File EVNT.49263189._001270.pool.root.1 did not pass corruption test",
[2026-04-21 20:16:39]     "pilotErrorCode": 1305,
[2026-04-21 20:16:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: File EVNT.49263189._001270.pool.root.1 did not pass corruption test",
[2026-04-21 20:16:39]  *** Listing of results directory ***
[2026-04-21 20:16:39] total 224212
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc      5094 Apr 19 11:42 queuedata.json
[2026-04-21 20:16:39] -rwx------. 1 boinc boinc     36322 Apr 19 11:43 runpilot2-wrapper.sh
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc    644190 Apr 19 11:43 pilot3.tar.gz
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc       100 Apr 21 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:16:39] -rwxr-xr-x. 1 boinc boinc      7986 Apr 21 20:13 run_atlas
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc       105 Apr 21 20:13 job.xml
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc      6262 Apr 21 20:13 init_data.xml
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc 225358505 Apr 21 20:13 ATLAS.root_0
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc     15615 Apr 21 20:13 start_atlas.sh
[2026-04-21 20:16:39] drwxrwx--x. 2 boinc boinc      4096 Apr 21 20:13 shared
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc    656926 Apr 21 20:13 input.tar.gz
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc         0 Apr 21 20:13 boinc_lockfile
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc      2578 Apr 21 20:13 pandaJob.out
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc    994998 Apr 21 20:13 agis_schedconf.cvmfs.json
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc   1509089 Apr 21 20:13 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc       444 Apr 21 20:13 workernode_map.json
[2026-04-21 20:16:39] drwx------. 5 boinc boinc      4096 Apr 21 20:13 pilot3
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc       953 Apr 21 20:14 memory_monitor_summary.json
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc     16551 Apr 21 20:14 log.49263191._052352.job.log.tgz.1
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc        95 Apr 21 20:15 pilot_heartbeat.json
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc      5930 Apr 21 20:16 heartbeat_new.json
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc      5892 Apr 21 20:16 heartbeat.json
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc        22 Apr 21 20:16 wrapper_checkpoint.txt
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc      8192 Apr 21 20:16 boinc_mmap_file
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc       478 Apr 21 20:16 boinc_task_state.xml
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc      4743 Apr 21 20:16 pilotlog.txt
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc     76042 Apr 21 20:16 log.49263191._052352.job.log.1
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc       188 Apr 21 20:16 output.list
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc       410 Apr 21 20:16 runtime_log
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc    112640 Apr 21 20:16 result.tar.gz
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc      8616 Apr 21 20:16 runtime_log.err
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc       647 Apr 21 20:16 a3afc1b27ff8.diag
[2026-04-21 20:16:39] -rw-r--r--. 1 boinc boinc     21599 Apr 21 20:16 stderr.txt
[2026-04-21 20:16:39] No HITS result produced
[2026-04-21 20:16:39]  *** Contents of shared directory: ***
[2026-04-21 20:16:39] total 220852
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc 225358505 Apr 21 20:13 ATLAS.root_0
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc     15615 Apr 21 20:13 start_atlas.sh
[2026-04-21 20:16:39] -rw-r--r--. 2 boinc boinc    656926 Apr 21 20:13 input.tar.gz
[2026-04-21 20:16:39] -rw-------. 1 boinc boinc    112640 Apr 21 20:16 result.tar.gz
20:16:41 (921347): run_atlas exited; CPU time 19.220545
20:16:41 (921347): called boinc_finish(0)

</stderr_txt>
]]>

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