Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
12:04:34 (471197): wrapper (7.7.26015): starting
12:04:34 (471197): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 12:04:34] Arguments: --nthreads 4
[2026-04-19 12:04:34] Threads: 4
[2026-04-19 12:04:34] Checking for CVMFS
[2026-04-19 12:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 12:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 12:04:37] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 12:04:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 12:04:37] 2.13.3.0 471407 0 25672 158615 3 1 3400922 4096001 0 130560 0 0 0.000 1282 2012 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-19 12:04:37] CVMFS is ok
[2026-04-19 12:04:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 12:04:37] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-19 12:04:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-19 12:04:37] Further information can be found at the LHC@home message board.
[2026-04-19 12:04:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 12:04:37] Checking for apptainer binary...
[2026-04-19 12:04:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 12:04:37] Running /usr/bin/apptainer --version
[2026-04-19 12:04:37] apptainer version 1.4.5
[2026-04-19 12:04:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 12:04:37] JM7
[2026-04-19 12:04:37] apptainer works
[2026-04-19 12:04:37] Set ATHENA_PROC_NUMBER=4
[2026-04-19 12:04:37] Set ATHENA_CORE_NUMBER=4
[2026-04-19 12:04:37] Starting ATLAS job with PandaID=7093247849
[2026-04-19 12:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 14:11:14]  *** The last 200 lines of the pilot log: ***
[2026-04-19 14:11:14] 2026-04-19 12:10:29,042 | INFO     | extracted standard info from prmon json
[2026-04-19 14:11:14] 2026-04-19 12:10:29,042 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 14:11:14] 2026-04-19 12:10:29,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 14:11:14] 2026-04-19 12:10:29,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 14:11:14] 2026-04-19 12:10:29,046 | INFO     | fitting pss+swap vs Time
[2026-04-19 14:11:14] 2026-04-19 12:10:29,046 | INFO     | sum of square deviations: 576985702.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,047 | INFO     | sum of deviations: 10253271132.000002
[2026-04-19 14:11:14] 2026-04-19 12:10:29,047 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,048 | INFO     | mean y: 2358724.9430894307
[2026-04-19 14:11:14] 2026-04-19 12:10:29,048 | INFO     | intersect: 2358724.9430894307
[2026-04-19 14:11:14] 2026-04-19 12:10:29,048 | INFO     | chi2: 1.1892838662361418
[2026-04-19 14:11:14] 2026-04-19 12:10:29,048 | INFO     | sum of square deviations: 509440249.5
[2026-04-19 14:11:14] 2026-04-19 12:10:29,049 | INFO     | sum of deviations: 9754252244.499996
[2026-04-19 14:11:14] 2026-04-19 12:10:29,049 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,050 | INFO     | mean y: 2357597.1440677964
[2026-04-19 14:11:14] 2026-04-19 12:10:29,050 | INFO     | intersect: 2357597.1440677964
[2026-04-19 14:11:14] 2026-04-19 12:10:29,050 | INFO     | chi2: 1.1910200602373489
[2026-04-19 14:11:14] 2026-04-19 12:10:29,050 | INFO     | current chi2=1.1910200602373489 (change=-0.14598650923448442 %)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,050 | INFO     | right removable region: 117
[2026-04-19 14:11:14] 2026-04-19 12:10:29,051 | INFO     | sum of square deviations: 509440249.5
[2026-04-19 14:11:14] 2026-04-19 12:10:29,052 | INFO     | sum of deviations: -1389039997.4999998
[2026-04-19 14:11:14] 2026-04-19 12:10:29,052 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,052 | INFO     | mean y: 2384215.5677966103
[2026-04-19 14:11:14] 2026-04-19 12:10:29,052 | INFO     | intersect: 2384215.5677966103
[2026-04-19 14:11:14] 2026-04-19 12:10:29,052 | INFO     | chi2: 0.007195124974994653
[2026-04-19 14:11:14] 2026-04-19 12:10:29,053 | INFO     | current chi2=0.007195124974994653 (change=99.39500356649368 %)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,053 | INFO     | sum of square deviations: 447383272.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,054 | INFO     | sum of deviations: -306834819.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,054 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,054 | INFO     | mean y: 2381540.4424778763
[2026-04-19 14:11:14] 2026-04-19 12:10:29,054 | INFO     | intersect: 2381540.4424778763
[2026-04-19 14:11:14] 2026-04-19 12:10:29,054 | INFO     | chi2: 0.004338054037195176
[2026-04-19 14:11:14] 2026-04-19 12:10:29,055 | INFO     | current chi2=0.004338054037195176 (change=39.70842685469269 %)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,055 | INFO     | sum of square deviations: 390582207.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,056 | INFO     | sum of deviations: 62327024.500000015
[2026-04-19 14:11:14] 2026-04-19 12:10:29,056 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,056 | INFO     | mean y: 2380601.342592593
[2026-04-19 14:11:14] 2026-04-19 12:10:29,056 | INFO     | intersect: 2380601.342592593
[2026-04-19 14:11:14] 2026-04-19 12:10:29,056 | INFO     | chi2: 0.001567294130992941
[2026-04-19 14:11:14] 2026-04-19 12:10:29,057 | INFO     | current chi2=0.001567294130992941 (change=63.87103255158401 %)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,057 | INFO     | sum of square deviations: 338804492.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,058 | INFO     | sum of deviations: -151303545.99999994
[2026-04-19 14:11:14] 2026-04-19 12:10:29,058 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,058 | INFO     | mean y: 2381230.0970873786
[2026-04-19 14:11:14] 2026-04-19 12:10:29,058 | INFO     | intersect: 2381230.0970873786
[2026-04-19 14:11:14] 2026-04-19 12:10:29,058 | INFO     | chi2: 0.0013999023701276208
[2026-04-19 14:11:14] 2026-04-19 12:10:29,059 | INFO     | current chi2=0.0013999023701276208 (change=10.68030292177966 %)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,059 | INFO     | left removable region: 20
[2026-04-19 14:11:14] 2026-04-19 12:10:29,059 | INFO     | sum of square deviations: 282974608.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,060 | INFO     | sum of deviations: -230261884.99999997
[2026-04-19 14:11:14] 2026-04-19 12:10:29,060 | INFO     | mean x (centered): 0.0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,060 | INFO     | mean y: 2380969.93814433
[2026-04-19 14:11:14] 2026-04-19 12:10:29,060 | INFO     | intersect: 2380969.93814433
[2026-04-19 14:11:14] 2026-04-19 12:10:29,061 | INFO     | chi2: 0.0013584007975701313
[2026-04-19 14:11:14] 2026-04-19 12:10:29,061 | INFO     | current memory leak: -0.81 B/s (using 97 data points, chi2=0.00)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,061 | INFO     | could have reported an average CPU frequency of 1527 MHz (8 samples)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,061 | INFO     | ..............................
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . Timing measurements:
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . get job = 0 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . initial setup = 5 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . payload setup = 8 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . stage-in = 0 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . payload execution = 7503 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . stage-out = 0 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,062 | INFO     | . log creation = 0 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,063 | INFO     | ..............................
[2026-04-19 14:11:14] 2026-04-19 12:10:29,151 | INFO     | 
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | job summary report
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | --------------------------------------------------
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | PanDA job id: 7093247849
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | task id: 49545114
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | errors: (none)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,152 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | pilot state: finished 
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | transexitcode: 0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | exeerrorcode: 0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | exeerrordiag: 
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | exitcode: 0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | exitmsg: OK
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | cpuconsumptiontime: 29223 s
[2026-04-19 14:11:14] 2026-04-19 12:10:29,153 | INFO     | nevents: 400
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | neventsw: 0
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | pid: 480457
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | pgrp: 480457
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | corecount: 4
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | event service: False
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | sizes: {0: 2283485, 11: 2283485, 7515: 2310858, 7516: 2319870, 7519: 2319926, 7521: 2320120}
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | --------------------------------------------------
[2026-04-19 14:11:14] 2026-04-19 12:10:29,154 | INFO     | 
[2026-04-19 14:11:14] 2026-04-19 12:10:29,155 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-04-19 14:11:14] 2026-04-19 12:10:29,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,176 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 14:11:14] 2026-04-19 12:10:29,176 | INFO     | job 7093247849 has completed (purged errors)
[2026-04-19 14:11:14] 2026-04-19 12:10:29,176 | INFO     | overall cleanup function is called
[2026-04-19 14:11:14] 2026-04-19 12:10:30,185 | INFO     | --- collectZombieJob: --- 10, [480457]
[2026-04-19 14:11:14] 2026-04-19 12:10:30,185 | INFO     | zombie collector waiting for pid 480457
[2026-04-19 14:11:14] 2026-04-19 12:10:30,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 14:11:14] 2026-04-19 12:10:30,185 | INFO     | collected zombie processes
[2026-04-19 14:11:14] 2026-04-19 12:10:30,185 | INFO     | will attempt to kill all subprocesses of pid=480457
[2026-04-19 14:11:14] 2026-04-19 12:10:30,434 | INFO     | process IDs to be killed: [480457] (in reverse order)
[2026-04-19 14:11:14] 2026-04-19 12:10:30,484 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 14:11:14] 2026-04-19 12:10:30,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 14:11:14] 2026-04-19 12:10:30,491 | INFO     | did not find any defunct processes belonging to 480457
[2026-04-19 14:11:14] 2026-04-19 12:10:30,497 | INFO     | did not find any defunct processes belonging to 480457
[2026-04-19 14:11:14] 2026-04-19 12:10:30,497 | INFO     | Ready for new job
[2026-04-19 14:11:14] 2026-04-19 12:10:30,499 | INFO     | **************************************
[2026-04-19 14:11:14] 2026-04-19 12:10:30,499 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 14:11:14] 2026-04-19 12:10:30,499 | INFO     | **************************************
[2026-04-19 14:11:14] 2026-04-19 12:10:30,499 | INFO     | 
[2026-04-19 14:11:14] 2026-04-19 12:10:30,503 | INFO     | architecture information:
[2026-04-19 14:11:14] 2026-04-19 12:10:30,504 | INFO     | executing command: cat /etc/os-release
[2026-04-19 14:11:14] 2026-04-19 12:10:30,514 | INFO     | cat /etc/os-release:
[2026-04-19 14:11:14] NAME="CentOS Linux"
[2026-04-19 14:11:14] VERSION="7 (Core)"
[2026-04-19 14:11:14] ID="centos"
[2026-04-19 14:11:14] ID_LIKE="rhel fedora"
[2026-04-19 14:11:14] VERSION_ID="7"
[2026-04-19 14:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 14:11:14] ANSI_COLOR="0;31"
[2026-04-19 14:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 14:11:14] HOME_URL="https://www.centos.org/"
[2026-04-19 14:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 14:11:14] 
[2026-04-19 14:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 14:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 14:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 14:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 14:11:14] 
[2026-04-19 14:11:14] 2026-04-19 12:10:30,515 | INFO     | **************************************
[2026-04-19 14:11:14] 2026-04-19 12:10:31,018 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-04-19 14:11:14] 2026-04-19 12:10:31,030 | INFO     | sufficient remaining disk space (189952688128 B)
[2026-04-19 14:11:14] 2026-04-19 12:10:31,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 14:11:14] 2026-04-19 12:10:31,030 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 14:11:14] 2026-04-19 12:10:31,031 | INFO     | update_server=False
[2026-04-19 14:11:14] 2026-04-19 12:10:31,031 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 14:11:14] 2026-04-19 12:10:31,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 14:11:14] 2026-04-19 12:10:31,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 14:11:14] 2026-04-19 12:10:31,032 | INFO     | aborting loop
[2026-04-19 14:11:14] 2026-04-19 12:10:31,054 | INFO     | all payload control threads have been joined
[2026-04-19 14:11:14] 2026-04-19 12:10:31,716 | INFO     | all job control threads have been joined
[2026-04-19 14:11:14] 2026-04-19 12:10:31,800 | INFO     | all data control threads have been joined
[2026-04-19 14:11:14] 2026-04-19 12:10:32,036 | INFO     | [job] retrieve thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,037 | INFO     | [job] queue monitor thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,037 | INFO     | [job] job monitor thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,060 | INFO     | [payload] control thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 14:11:14] 2026-04-19 12:10:32,097 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,194 | INFO     | [payload] validate_post thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,220 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,519 | INFO     | [data] copytool_in thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,722 | INFO     | [job] control thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:32,806 | INFO     | [data] control thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:33,084 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:33,191 | INFO     | [payload] failed_post thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:33,315 | INFO     | [job] validate thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:33,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 14:11:14] 2026-04-19 12:10:34,084 | INFO     | [data] copytool_out thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:37,417 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:10:41,133 | INFO     | job.realtimelogging is not enabled
[2026-04-19 14:11:14] 2026-04-19 12:10:42,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 14:11:14] 2026-04-19 12:11:02,411 | INFO     | PID=475746 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-19 14:11:14] 2026-04-19 12:11:02,411 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 14:11:14] 2026-04-19 12:11:02,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 14:11:14] 2026-04-19 12:11:02,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 14:11:14] 2026-04-19 12:11:06,750 | INFO     | [monitor] cgroup control has ended
[2026-04-19 14:11:14] 2026-04-19 12:11:08,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233345996608)>', '<ExcThread(monitor, started 140232989058816)>']
[2026-04-19 14:11:14] 2026-04-19 12:11:09,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 14:11:14] 2026-04-19 12:11:09,447 | INFO     | [monitor] control thread has ended
[2026-04-19 14:11:14] 2026-04-19 12:11:13,812 | INFO     | all workflow threads have been joined
[2026-04-19 14:11:14] 2026-04-19 12:11:13,813 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 14:11:14] 2026-04-19 12:11:13,813 | INFO     | traces error code: 0
[2026-04-19 14:11:14] 2026-04-19 12:11:13,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 14:11:14] 2026-04-19 12:11:13,915 [wrapper] ==== pilot stdout END ====
[2026-04-19 14:11:14] 2026-04-19 12:11:13,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 14:11:14] 2026-04-19 12:11:13,921 [wrapper] pilotpid: 475746
[2026-04-19 14:11:14] 2026-04-19 12:11:13,924 [wrapper] Pilot exit status: 0
[2026-04-19 14:11:14] 2026-04-19 12:11:13,934 [wrapper] pandaids: 7093247849
[2026-04-19 14:11:14] 2026-04-19 12:11:13,972 [wrapper] cleanup supervisor_pilot  489464 475747
[2026-04-19 14:11:14] 2026-04-19 12:11:13,975 [wrapper] Test setup, not cleaning
[2026-04-19 14:11:14] 2026-04-19 12:11:13,978 [wrapper] apfmon messages muted
[2026-04-19 14:11:14] 2026-04-19 12:11:13,981 [wrapper] ==== wrapper stdout END ====
[2026-04-19 14:11:14] 2026-04-19 12:11:13,983 [wrapper] ==== wrapper stderr END ====
[2026-04-19 14:11:14]  *** Error codes and diagnostics ***
[2026-04-19 14:11:14]     "exeErrorCode": 0,
[2026-04-19 14:11:14]     "pilotErrorCode": 0,
[2026-04-19 14:11:14]  *** Listing of results directory ***
[2026-04-19 14:11:14] total 462880
[2026-04-19 14:11:14] -rwx------ 1 boinc boinc     36322 abr 16 18:07 runpilot2-wrapper.sh
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc    644190 abr 17 10:44 pilot3.tar.gz
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc      5094 abr 18 05:11 queuedata.json
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc       100 abr 19 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 14:11:14] -rwxr-xr-x 1 boinc boinc      7986 abr 19 12:04 run_atlas
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc       105 abr 19 12:04 job.xml
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc 280447117 abr 19 12:04 EVNT.49539591._000624.pool.root.1
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc     15665 abr 19 12:04 start_atlas.sh
[2026-04-19 14:11:14] drwxrwx--x 1 boinc boinc        76 abr 19 12:04 shared
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc    656932 abr 19 12:04 input.tar.gz
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc      8612 abr 19 12:04 init_data.xml
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc         0 abr 19 12:04 boinc_setup_complete
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc         0 abr 19 12:04 boinc_lockfile
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc      2604 abr 19 12:04 pandaJob.out
[2026-04-19 14:11:14] -rw------- 1 boinc boinc    997671 abr 19 12:04 agis_schedconf.cvmfs.json
[2026-04-19 14:11:14] -rw------- 1 boinc boinc   1512404 abr 19 12:04 agis_ddmendpoints.agis.ALL.json
[2026-04-19 14:11:14] -rw------- 1 boinc boinc       422 abr 19 12:04 workernode_map.json
[2026-04-19 14:11:14] drwx------ 1 boinc boinc       474 abr 19 12:04 pilot3
[2026-04-19 14:11:14] -rw------- 1 boinc boinc 187584476 abr 19 14:09 HITS.49545114._015577.pool.root.1
[2026-04-19 14:11:14] -rw------- 1 boinc boinc        95 abr 19 14:10 pilot_heartbeat.json
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc       487 abr 19 14:10 boinc_task_state.xml
[2026-04-19 14:11:14] -rw------- 1 boinc boinc      1037 abr 19 14:10 memory_monitor_summary.json
[2026-04-19 14:11:14] -rw------- 1 boinc boinc    256785 abr 19 14:10 log.49545114._015577.job.log.tgz.1
[2026-04-19 14:11:14] -rw------- 1 boinc boinc      6336 abr 19 14:10 heartbeat_new.json
[2026-04-19 14:11:14] -rw------- 1 boinc boinc      6227 abr 19 14:10 heartbeat.json
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc      8192 abr 19 14:11 boinc_mmap_file
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc        27 abr 19 14:11 wrapper_checkpoint.txt
[2026-04-19 14:11:14] -rw------- 1 boinc boinc      4822 abr 19 14:11 pilotlog.txt
[2026-04-19 14:11:14] -rw------- 1 boinc boinc    702736 abr 19 14:11 log.49545114._015577.job.log.1
[2026-04-19 14:11:14] -rw------- 1 boinc boinc       357 abr 19 14:11 output.list
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc       410 abr 19 14:11 runtime_log
[2026-04-19 14:11:14] -rw------- 1 boinc boinc    972800 abr 19 14:11 result.tar.gz
[2026-04-19 14:11:14] -rw------- 1 boinc boinc       638 abr 19 14:11 092c4b54add1.diag
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc      8478 abr 19 14:11 runtime_log.err
[2026-04-19 14:11:14] -rw-r--r-- 1 boinc boinc     20835 abr 19 14:11 stderr.txt
[2026-04-19 14:11:14] HITS file was successfully produced:
[2026-04-19 14:11:14] -rw------- 1 boinc boinc 187584476 abr 19 14:09 shared/HITS.pool.root.1
[2026-04-19 14:11:14]  *** Contents of shared directory: ***
[2026-04-19 14:11:14] total 458676
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc 280447117 abr 19 12:04 ATLAS.root_0
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc     15665 abr 19 12:04 start_atlas.sh
[2026-04-19 14:11:14] -rw-r--r-- 2 boinc boinc    656932 abr 19 12:04 input.tar.gz
[2026-04-19 14:11:14] -rw------- 1 boinc boinc 187584476 abr 19 14:09 HITS.pool.root.1
[2026-04-19 14:11:14] -rw------- 1 boinc boinc    972800 abr 19 14:11 result.tar.gz
14:11:15 (471197): run_atlas exited; CPU time 29406.373882
14:11:15 (471197): called boinc_finish(0)

</stderr_txt>
]]>

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