Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:50:05 (2098527): wrapper (7.7.26015): starting
04:50:05 (2098527): wrapper: running run_atlas (--nthreads 9)
[2026-04-19 04:50:05] Arguments: --nthreads 9
[2026-04-19 04:50:05] Threads: 9
[2026-04-19 04:50:05] Checking for CVMFS
[2026-04-19 04:50:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 04:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 04:50:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 04:50:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 04:50:06] 2.13.3.0 245921 123182 149204 158613 0 63 36847439 40960001 22753 16776704 0 311532439 99.797 166050237 39832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-19 04:50:06] CVMFS is ok
[2026-04-19 04:50:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 04:50:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 04:50:06] Further information can be found at the LHC@home message board.
[2026-04-19 04:50:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 04:50:06] Checking for apptainer binary...
[2026-04-19 04:50:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 04:50:06] Running /usr/bin/apptainer --version
[2026-04-19 04:50:07] apptainer version 1.4.5-2.el9
[2026-04-19 04:50:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 04:50:07] c-212-12.aglt2.org
[2026-04-19 04:50:07] apptainer works
[2026-04-19 04:50:07] Set ATHENA_PROC_NUMBER=9
[2026-04-19 04:50:07] Set ATHENA_CORE_NUMBER=9
[2026-04-19 04:50:07] Starting ATLAS job with PandaID=7093247916
[2026-04-19 04:50:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 07:22:08]  *** The last 200 lines of the pilot log: ***
[2026-04-19 07:22:08] 2026-04-19 11:21:32,002 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7093247916/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 07:22:08] 2026-04-19 11:21:32,295 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-19 07:22:08] 2026-04-19 11:21:33,120 | INFO     | number of running child processes to parent process 2109632: 1
[2026-04-19 07:22:08] 2026-04-19 11:21:33,121 | INFO     | maximum number of monitored processes: 6
[2026-04-19 07:22:08] 2026-04-19 11:21:33,744 | INFO     | job 7093247916 has state=finished
[2026-04-19 07:22:08] 2026-04-19 11:21:33,744 | INFO     | preparing for final server update for job 7093247916 in state='finished'
[2026-04-19 07:22:08] 2026-04-19 11:21:33,744 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7093247916/jobReport.json
[2026-04-19 07:22:08] 2026-04-19 11:21:33,747 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-19 07:22:08] 2026-04-19 11:21:33,747 | INFO     | this job has now completed (state=finished)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,747 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,747 | INFO     | log transfer has been attempted: DONE
[2026-04-19 07:22:08] 2026-04-19 11:21:33,747 | INFO     | job 7093247916 has finished - writing final server update
[2026-04-19 07:22:08] 2026-04-19 11:21:33,752 | INFO     | total number of processed events: 400 (read)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,831 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7093247916/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,832 | INFO     | extracted standard info from prmon json
[2026-04-19 07:22:08] 2026-04-19 11:21:33,832 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 07:22:08] 2026-04-19 11:21:33,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 07:22:08] 2026-04-19 11:21:33,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 07:22:08] 2026-04-19 11:21:33,849 | INFO     | fitting pss+swap vs Time
[2026-04-19 07:22:08] 2026-04-19 11:21:33,849 | INFO     | sum of square deviations: 984936876.1768705
[2026-04-19 07:22:08] 2026-04-19 11:21:33,850 | INFO     | sum of deviations: 8993312716.802721
[2026-04-19 07:22:08] 2026-04-19 11:21:33,850 | INFO     | mean x (centered): 0.0
[2026-04-19 07:22:08] 2026-04-19 11:21:33,850 | INFO     | mean y: 2551719.1088435375
[2026-04-19 07:22:08] 2026-04-19 11:21:33,850 | INFO     | intersect: 2551719.1088435375
[2026-04-19 07:22:08] 2026-04-19 11:21:33,850 | INFO     | chi2: 3.1768366546924476
[2026-04-19 07:22:08] 2026-04-19 11:21:33,851 | INFO     | sum of square deviations: 887794892.929579
[2026-04-19 07:22:08] 2026-04-19 11:21:33,851 | INFO     | sum of deviations: 18114163352.19718
[2026-04-19 07:22:08] 2026-04-19 11:21:33,851 | INFO     | mean x (centered): 0.0
[2026-04-19 07:22:08] 2026-04-19 11:21:33,851 | INFO     | mean y: 2565629.9225352113
[2026-04-19 07:22:08] 2026-04-19 11:21:33,852 | INFO     | intersect: 2565629.9225352113
[2026-04-19 07:22:08] 2026-04-19 11:21:33,869 | INFO     | chi2: 2.5078977378913985
[2026-04-19 07:22:08] 2026-04-19 11:21:33,869 | INFO     | current chi2=2.5078977378913985 (change=21.056761474121487 %)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,869 | INFO     | right removable region: 141
[2026-04-19 07:22:08] 2026-04-19 11:21:33,869 | INFO     | sum of square deviations: 887806118.6478878
[2026-04-19 07:22:08] 2026-04-19 11:21:33,870 | INFO     | sum of deviations: -22489092221.36619
[2026-04-19 07:22:08] 2026-04-19 11:21:33,870 | INFO     | mean x (centered): 0.0
[2026-04-19 07:22:08] 2026-04-19 11:21:33,870 | INFO     | mean y: 2600577.26056338
[2026-04-19 07:22:08] 2026-04-19 11:21:33,870 | INFO     | intersect: 2600577.26056338
[2026-04-19 07:22:08] 2026-04-19 11:21:33,871 | INFO     | chi2: 0.9236788055802401
[2026-04-19 07:22:08] 2026-04-19 11:21:33,871 | INFO     | current chi2=0.9236788055802401 (change=70.92457353084582 %)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,871 | INFO     | sum of square deviations: 797280136.1167868
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | sum of deviations: -25406180461.021904
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | mean x (centered): 0.0
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | mean y: 2605430.5474452553
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | intersect: 2605430.5474452553
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | chi2: 0.8794856295684462
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | current chi2=0.8794856295684462 (change=4.784474402228208 %)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | left removable region: 10
[2026-04-19 07:22:08] 2026-04-19 11:21:33,872 | INFO     | sum of square deviations: 697031026.3816772
[2026-04-19 07:22:08] 2026-04-19 11:21:33,892 | INFO     | sum of deviations: -15655537699.160301
[2026-04-19 07:22:08] 2026-04-19 11:21:33,892 | INFO     | mean x (centered): 0.0
[2026-04-19 07:22:08] 2026-04-19 11:21:33,893 | INFO     | mean y: 2622638.3511450384
[2026-04-19 07:22:08] 2026-04-19 11:21:33,893 | INFO     | intersect: 2622638.3511450384
[2026-04-19 07:22:08] 2026-04-19 11:21:33,893 | INFO     | chi2: 0.16453879078791547
[2026-04-19 07:22:08] 2026-04-19 11:21:33,893 | INFO     | current memory leak: -22.46 B/s (using 131 data points, chi2=0.16)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | could have reported an average CPU frequency of 3112 MHz (8 samples)
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | ..............................
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . Timing measurements:
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . get job = 0 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . initial setup = 22 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . payload setup = 29 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . stage-in = 0 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . payload execution = 8953 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . stage-out = 3 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | . log creation = 0 s
[2026-04-19 07:22:08] 2026-04-19 11:21:33,894 | INFO     | ..............................
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | 
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | job summary report
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | --------------------------------------------------
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | PanDA job id: 7093247916
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | task id: 49545114
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | errors: (none)
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | pilot state: finished 
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | transexitcode: 0
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | exeerrorcode: 0
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | exeerrordiag: 
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | exitcode: 0
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | exitmsg: OK
[2026-04-19 07:22:08] 2026-04-19 11:21:34,098 | INFO     | cpuconsumptiontime: 34513 s
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | nevents: 400
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | neventsw: 0
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | pid: 2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | pgrp: 2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | corecount: 9
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | event service: False
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | sizes: {0: 2281623, 1: 2281707, 2: 2268506, 3: 2283536, 13: 2283564, 8987: 2312027, 8988: 2312154, 8992: 2321208, 8994: 2321264, 8995: 2321458}
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | --------------------------------------------------
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | 
[2026-04-19 07:22:08] 2026-04-19 11:21:34,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-19 07:22:08] 2026-04-19 11:21:34,131 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,131 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,131 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,131 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 07:22:08] 2026-04-19 11:21:34,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,133 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 07:22:08] 2026-04-19 11:21:34,133 | INFO     | job 7093247916 has completed (purged errors)
[2026-04-19 07:22:08] 2026-04-19 11:21:34,133 | INFO     | overall cleanup function is called
[2026-04-19 07:22:08] 2026-04-19 11:21:35,142 | INFO     | --- collectZombieJob: --- 10, [2109632]
[2026-04-19 07:22:08] 2026-04-19 11:21:35,142 | INFO     | zombie collector waiting for pid 2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:35,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 07:22:08] 2026-04-19 11:21:35,142 | INFO     | collected zombie processes
[2026-04-19 07:22:08] 2026-04-19 11:21:35,142 | INFO     | will attempt to kill all subprocesses of pid=2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:35,531 | INFO     | process IDs to be killed: [2109632] (in reverse order)
[2026-04-19 07:22:08] 2026-04-19 11:21:35,783 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 07:22:08] 2026-04-19 11:21:35,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 07:22:08] 2026-04-19 11:21:35,825 | INFO     | did not find any defunct processes belonging to 2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:35,840 | INFO     | did not find any defunct processes belonging to 2109632
[2026-04-19 07:22:08] 2026-04-19 11:21:35,840 | INFO     | Ready for new job
[2026-04-19 07:22:08] 2026-04-19 11:21:35,842 | INFO     | **************************************
[2026-04-19 07:22:08] 2026-04-19 11:21:35,842 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 07:22:08] 2026-04-19 11:21:35,842 | INFO     | **************************************
[2026-04-19 07:22:08] 2026-04-19 11:21:35,842 | INFO     | 
[2026-04-19 07:22:08] 2026-04-19 11:21:35,847 | INFO     | architecture information:
[2026-04-19 07:22:08] 2026-04-19 11:21:35,848 | INFO     | executing command: cat /etc/os-release
[2026-04-19 07:22:08] 2026-04-19 11:21:35,915 | INFO     | cat /etc/os-release:
[2026-04-19 07:22:08] NAME="CentOS Linux"
[2026-04-19 07:22:08] VERSION="7 (Core)"
[2026-04-19 07:22:08] ID="centos"
[2026-04-19 07:22:08] ID_LIKE="rhel fedora"
[2026-04-19 07:22:08] VERSION_ID="7"
[2026-04-19 07:22:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 07:22:08] ANSI_COLOR="0;31"
[2026-04-19 07:22:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 07:22:08] HOME_URL="https://www.centos.org/"
[2026-04-19 07:22:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 07:22:08] 
[2026-04-19 07:22:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 07:22:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 07:22:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 07:22:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 07:22:08] 
[2026-04-19 07:22:08] 2026-04-19 11:21:35,915 | INFO     | **************************************
[2026-04-19 07:22:08] 2026-04-19 11:21:36,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-19 07:22:08] 2026-04-19 11:21:36,495 | INFO     | sufficient remaining disk space (104527298560 B)
[2026-04-19 07:22:08] 2026-04-19 11:21:36,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 07:22:08] 2026-04-19 11:21:36,496 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 07:22:08] 2026-04-19 11:21:36,496 | INFO     | update_server=False
[2026-04-19 07:22:08] 2026-04-19 11:21:36,497 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 07:22:08] 2026-04-19 11:21:36,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 07:22:08] 2026-04-19 11:21:36,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 07:22:08] 2026-04-19 11:21:36,639 | INFO     | aborting loop
[2026-04-19 07:22:08] 2026-04-19 11:21:36,802 | INFO     | all data control threads have been joined
[2026-04-19 07:22:08] 2026-04-19 11:21:37,503 | INFO     | [job] retrieve thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:37,645 | INFO     | [job] job monitor thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:37,777 | INFO     | all job control threads have been joined
[2026-04-19 07:22:08] 2026-04-19 11:21:37,790 | INFO     | all payload control threads have been joined
[2026-04-19 07:22:08] 2026-04-19 11:21:37,808 | INFO     | [data] control thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,310 | INFO     | [payload] failed_post thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,358 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,467 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,470 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,478 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,482 | INFO     | [data] copytool_in thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,504 | INFO     | [data] copytool_out thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,560 | INFO     | [job] validate thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,783 | INFO     | [job] control thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,796 | INFO     | [payload] control thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:38,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 07:22:08] 2026-04-19 11:21:39,096 | INFO     | [payload] validate_post thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:39,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 07:22:08] 2026-04-19 11:21:39,926 | INFO     | [monitor] cgroup control has ended
[2026-04-19 07:22:08] 2026-04-19 11:21:40,118 | INFO     | [job] queue monitor thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:42,986 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 07:22:08] 2026-04-19 11:21:43,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278438590272)>', '<ExcThread(monitor, started 140277977175808)>']
[2026-04-19 07:22:08] 2026-04-19 11:21:48,271 | INFO     | all workflow threads have been joined
[2026-04-19 07:22:08] 2026-04-19 11:21:48,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 07:22:08] 2026-04-19 11:21:48,271 | INFO     | traces error code: 0
[2026-04-19 07:22:08] 2026-04-19 11:21:48,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 07:22:08] 2026-04-19 11:22:07,515 | INFO     | PID=2103284 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 07:22:08] 2026-04-19 11:22:07,516 | INFO     | .. there are 16 such processes running
[2026-04-19 07:22:08] 2026-04-19 11:22:07,516 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 07:22:08] 2026-04-19 11:22:07,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 07:22:08] 2026-04-19 11:22:07,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 07:22:08] 2026-04-19 11:22:07,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 07:22:08] 2026-04-19 11:22:07,517 | INFO     | [monitor] control thread has ended
[2026-04-19 07:22:08] 2026-04-19 11:22:08,093 [wrapper] ==== pilot stdout END ====
[2026-04-19 07:22:08] 2026-04-19 11:22:08,150 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 07:22:08] 2026-04-19 11:22:08,167 [wrapper] pilotpid: 2103284
[2026-04-19 07:22:08] 2026-04-19 11:22:08,182 [wrapper] Pilot exit status: 0
[2026-04-19 07:22:08] 2026-04-19 11:22:08,319 [wrapper] pandaids: 7093247916
[2026-04-19 07:22:08] 2026-04-19 11:22:08,434 [wrapper] cleanup supervisor_pilot 2439954 2103285
[2026-04-19 07:22:08] 2026-04-19 11:22:08,437 [wrapper] Test setup, not cleaning
[2026-04-19 07:22:08] 2026-04-19 11:22:08,441 [wrapper] apfmon messages muted
[2026-04-19 07:22:08] 2026-04-19 11:22:08,445 [wrapper] ==== wrapper stdout END ====
[2026-04-19 07:22:08] 2026-04-19 11:22:08,448 [wrapper] ==== wrapper stderr END ====
[2026-04-19 07:22:08]  *** Error codes and diagnostics ***
[2026-04-19 07:22:08]     "exeErrorCode": 0,
[2026-04-19 07:22:08]     "pilotErrorCode": 0,
[2026-04-19 07:22:08]  *** Listing of results directory ***
[2026-04-19 07:22:08] total 461560
[2026-04-19 07:22:08] -rwx------. 1 boincer umatlas     36322 Apr 19 04:22 runpilot2-wrapper.sh
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas    644190 Apr 19 04:26 pilot3.tar.gz
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas      5094 Apr 19 04:28 queuedata.json
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas       100 Apr 19 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 07:22:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 04:50 run_atlas
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas       105 Apr 19 04:50 job.xml
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas 279128952 Apr 19 04:50 EVNT.49539591._000626.pool.root.1
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 04:50 start_atlas.sh
[2026-04-19 07:22:08] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 04:50 shared
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas    656930 Apr 19 04:50 input.tar.gz
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas         0 Apr 19 04:50 boinc_lockfile
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas      2605 Apr 19 04:50 pandaJob.out
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas        57 Apr 19 04:50 setup.sh.local
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas    997681 Apr 19 04:51 agis_schedconf.cvmfs.json
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas   1512404 Apr 19 04:51 agis_ddmendpoints.agis.ALL.json
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas       430 Apr 19 04:51 workernode_map.json
[2026-04-19 07:22:08] drwx------. 5 boincer umatlas      4096 Apr 19 04:51 pilot3
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas      6874 Apr 19 07:19 init_data.xml
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas 187083150 Apr 19 07:20 HITS.49545114._015644.pool.root.1
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas       487 Apr 19 07:20 boinc_task_state.xml
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas      1047 Apr 19 07:21 memory_monitor_summary.json
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas    367916 Apr 19 07:21 log.49545114._015644.job.log.tgz.1
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas      6374 Apr 19 07:21 heartbeat_new.json
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas      6265 Apr 19 07:21 heartbeat.json
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 07:22 boinc_mmap_file
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas        27 Apr 19 07:22 wrapper_checkpoint.txt
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas        95 Apr 19 07:22 pilot_heartbeat.json
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas       823 Apr 19 07:22 pilotlog.txt
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas    817156 Apr 19 07:22 log.49545114._015644.job.log.1
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas       357 Apr 19 07:22 output.list
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas       410 Apr 19 07:22 runtime_log
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas   1198080 Apr 19 07:22 result.tar.gz
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas      8963 Apr 19 07:22 runtime_log.err
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas       657 Apr 19 07:22 90d7500d045e.diag
[2026-04-19 07:22:08] -rw-r--r--. 1 boincer umatlas     21312 Apr 19 07:22 stderr.txt
[2026-04-19 07:22:08] HITS file was successfully produced:
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas 187083150 Apr 19 07:20 shared/HITS.pool.root.1
[2026-04-19 07:22:08]  *** Contents of shared directory: ***
[2026-04-19 07:22:08] total 457128
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas 279128952 Apr 19 04:50 ATLAS.root_0
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 19 04:50 start_atlas.sh
[2026-04-19 07:22:08] -rw-r--r--. 2 boincer umatlas    656930 Apr 19 04:50 input.tar.gz
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas 187083150 Apr 19 07:20 HITS.pool.root.1
[2026-04-19 07:22:08] -rw-------. 1 boincer umatlas   1198080 Apr 19 07:22 result.tar.gz
07:22:09 (2098527): run_atlas exited; CPU time 34791.986377
07:22:09 (2098527): called boinc_finish(0)

</stderr_txt>
]]>

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