Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:17 (784800): wrapper (7.7.26015): starting
04:18:17 (784800): wrapper: running run_atlas (--nthreads 12)
[2026-04-19 04:18:17] Arguments: --nthreads 12
[2026-04-19 04:18:17] Threads: 12
[2026-04-19 04:18:17] Checking for CVMFS
[2026-04-19 04:18:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 04:18:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 04:18:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 04:18:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 04:18:17] 2.13.3.0 9863 237025 191692 158613 2 65 27031420 32935937 9038 16776704 0 999684399 99.699 782574080 31926 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-19 04:18:17] CVMFS is ok
[2026-04-19 04:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 04:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 04:18:17] Further information can be found at the LHC@home message board.
[2026-04-19 04:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 04:18:17] Checking for apptainer binary...
[2026-04-19 04:18:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 04:18:17] Running /usr/bin/apptainer --version
[2026-04-19 04:18:17] apptainer version 1.4.5-2.el9
[2026-04-19 04:18:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 04:18:18] c-5-3.aglt2.org
[2026-04-19 04:18:18] apptainer works
[2026-04-19 04:18:18] Set ATHENA_PROC_NUMBER=12
[2026-04-19 04:18:18] Set ATHENA_CORE_NUMBER=12
[2026-04-19 04:18:18] Starting ATLAS job with PandaID=7102934296
[2026-04-19 04:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 12:41:02]  *** The last 200 lines of the pilot log: ***
[2026-04-19 12:41:02] 2026-04-19 16:40:27,049 | INFO     | summary of transferred files:
[2026-04-19 12:41:02] 2026-04-19 16:40:27,049 | INFO     |  -- lfn=log.49820375._007112.job.log.tgz.1, status_code=0, status=transferred
[2026-04-19 12:41:02] 2026-04-19 16:40:27,049 | INFO     | stage-out finished correctly
[2026-04-19 12:41:02] 2026-04-19 16:40:27,221 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-19 12:41:02] 2026-04-19 16:40:28,250 | INFO     | job 7102934296 has state=finished
[2026-04-19 12:41:02] 2026-04-19 16:40:28,250 | INFO     | preparing for final server update for job 7102934296 in state='finished'
[2026-04-19 12:41:02] 2026-04-19 16:40:28,251 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7102934296/jobReport.json
[2026-04-19 12:41:02] 2026-04-19 16:40:28,254 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-19 12:41:02] 2026-04-19 16:40:28,257 | INFO     | this job has now completed (state=finished)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,258 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,258 | INFO     | log transfer has been attempted: DONE
[2026-04-19 12:41:02] 2026-04-19 16:40:28,258 | INFO     | job 7102934296 has finished - writing final server update
[2026-04-19 12:41:02] 2026-04-19 16:40:28,258 | INFO     | total number of processed events: 400 (read)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,267 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7102934296/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,267 | INFO     | extracted standard info from prmon json
[2026-04-19 12:41:02] 2026-04-19 16:40:28,268 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 12:41:02] 2026-04-19 16:40:28,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 12:41:02] 2026-04-19 16:40:28,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 12:41:02] 2026-04-19 16:40:28,293 | INFO     | fitting pss+swap vs Time
[2026-04-19 12:41:02] 2026-04-19 16:40:28,294 | INFO     | sum of square deviations: 37155129698.63664
[2026-04-19 12:41:02] 2026-04-19 16:40:28,300 | INFO     | sum of deviations: -12147256847.711897
[2026-04-19 12:41:02] 2026-04-19 16:40:28,300 | INFO     | mean x (centered): 0.0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,300 | INFO     | mean y: 2787226.7545638946
[2026-04-19 12:41:02] 2026-04-19 16:40:28,301 | INFO     | intersect: 2787226.7545638946
[2026-04-19 12:41:02] 2026-04-19 16:40:28,301 | INFO     | chi2: 2.146957565019022
[2026-04-19 12:41:02] 2026-04-19 16:40:28,302 | INFO     | sum of square deviations: 36036214190.19469
[2026-04-19 12:41:02] 2026-04-19 16:40:28,308 | INFO     | sum of deviations: -14022053869.735624
[2026-04-19 12:41:02] 2026-04-19 16:40:28,308 | INFO     | mean x (centered): 0.0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,308 | INFO     | mean y: 2786972.026639344
[2026-04-19 12:41:02] 2026-04-19 16:40:28,308 | INFO     | intersect: 2786972.026639344
[2026-04-19 12:41:02] 2026-04-19 16:40:28,309 | INFO     | chi2: 2.1452352817535925
[2026-04-19 12:41:02] 2026-04-19 16:40:28,309 | INFO     | current chi2=2.1452352817535925 (change=0.0802197161923914 %)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,309 | INFO     | right removable region: 487
[2026-04-19 12:41:02] 2026-04-19 16:40:28,310 | INFO     | sum of square deviations: 36035727821.532845
[2026-04-19 12:41:02] 2026-04-19 16:40:28,316 | INFO     | sum of deviations: -115412962460.6764
[2026-04-19 12:41:02] 2026-04-19 16:40:28,316 | INFO     | mean x (centered): 0.0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,316 | INFO     | mean y: 2801250.9528688523
[2026-04-19 12:41:02] 2026-04-19 16:40:28,316 | INFO     | intersect: 2801250.9528688523
[2026-04-19 12:41:02] 2026-04-19 16:40:28,317 | INFO     | chi2: 0.43261360738105376
[2026-04-19 12:41:02] 2026-04-19 16:40:28,317 | INFO     | current chi2=0.43261360738105376 (change=79.8499227730558 %)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,318 | INFO     | sum of square deviations: 34939024043.86745
[2026-04-19 12:41:02] 2026-04-19 16:40:28,324 | INFO     | sum of deviations: -108655167778.24641
[2026-04-19 12:41:02] 2026-04-19 16:40:28,324 | INFO     | mean x (centered): 0.0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,324 | INFO     | mean y: 2800297.927536232
[2026-04-19 12:41:02] 2026-04-19 16:40:28,325 | INFO     | intersect: 2800297.927536232
[2026-04-19 12:41:02] 2026-04-19 16:40:28,325 | INFO     | chi2: 0.3952206446511205
[2026-04-19 12:41:02] 2026-04-19 16:40:28,326 | INFO     | current chi2=0.3952206446511205 (change=8.643501288898864 %)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,326 | INFO     | left removable region: 10
[2026-04-19 12:41:02] 2026-04-19 16:40:28,327 | INFO     | sum of square deviations: 33653155621.576366
[2026-04-19 12:41:02] 2026-04-19 16:40:28,332 | INFO     | sum of deviations: -109565146811.48422
[2026-04-19 12:41:02] 2026-04-19 16:40:28,333 | INFO     | mean x (centered): 0.0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,333 | INFO     | mean y: 2800169.4465408805
[2026-04-19 12:41:02] 2026-04-19 16:40:28,333 | INFO     | intersect: 2800169.4465408805
[2026-04-19 12:41:02] 2026-04-19 16:40:28,334 | INFO     | chi2: 0.39232452372841653
[2026-04-19 12:41:02] 2026-04-19 16:40:28,334 | INFO     | current memory leak: -3.26 B/s (using 477 data points, chi2=0.39)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,335 | INFO     | could have reported an average CPU frequency of 2620 MHz (20 samples)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,335 | INFO     | ..............................
[2026-04-19 12:41:02] 2026-04-19 16:40:28,335 | INFO     | . Timing measurements:
[2026-04-19 12:41:02] 2026-04-19 16:40:28,335 | INFO     | . get job = 0 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . initial setup = 9 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . payload setup = 12 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . stage-in = 0 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . payload execution = 30075 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . stage-out = 2 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | . log creation = 0 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,336 | INFO     | ..............................
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | 
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | job summary report
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | --------------------------------------------------
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | PanDA job id: 7102934296
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | task id: 49820375
[2026-04-19 12:41:02] 2026-04-19 16:40:28,444 | INFO     | errors: (none)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | pilot state: finished 
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | transexitcode: 0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | exeerrorcode: 0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | exeerrordiag: 
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | exitcode: 0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | exitmsg: OK
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | cpuconsumptiontime: 88814 s
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | nevents: 400
[2026-04-19 12:41:02] 2026-04-19 16:40:28,445 | INFO     | neventsw: 0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | pid: 795022
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | pgrp: 795022
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | corecount: 12
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | event service: False
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | sizes: {0: 2280932, 1: 2283418, 12: 2283418, 30091: 2321238, 30095: 2330292, 30096: 2330430}
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | --------------------------------------------------
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | 
[2026-04-19 12:41:02] 2026-04-19 16:40:28,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | job 7102934296 has completed (purged errors)
[2026-04-19 12:41:02] 2026-04-19 16:40:28,469 | INFO     | overall cleanup function is called
[2026-04-19 12:41:02] 2026-04-19 16:40:29,478 | INFO     | --- collectZombieJob: --- 10, [795022]
[2026-04-19 12:41:02] 2026-04-19 16:40:29,478 | INFO     | zombie collector waiting for pid 795022
[2026-04-19 12:41:02] 2026-04-19 16:40:29,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 12:41:02] 2026-04-19 16:40:29,479 | INFO     | collected zombie processes
[2026-04-19 12:41:02] 2026-04-19 16:40:29,479 | INFO     | will attempt to kill all subprocesses of pid=795022
[2026-04-19 12:41:02] 2026-04-19 16:40:29,807 | INFO     | process IDs to be killed: [795022] (in reverse order)
[2026-04-19 12:41:02] 2026-04-19 16:40:29,908 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 12:41:02] 2026-04-19 16:40:29,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 12:41:02] 2026-04-19 16:40:29,920 | INFO     | did not find any defunct processes belonging to 795022
[2026-04-19 12:41:02] 2026-04-19 16:40:29,931 | INFO     | did not find any defunct processes belonging to 795022
[2026-04-19 12:41:02] 2026-04-19 16:40:29,932 | INFO     | Ready for new job
[2026-04-19 12:41:02] 2026-04-19 16:40:29,934 | INFO     | **************************************
[2026-04-19 12:41:02] 2026-04-19 16:40:29,934 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 12:41:02] 2026-04-19 16:40:29,934 | INFO     | **************************************
[2026-04-19 12:41:02] 2026-04-19 16:40:29,935 | INFO     | 
[2026-04-19 12:41:02] 2026-04-19 16:40:29,937 | INFO     | architecture information:
[2026-04-19 12:41:02] 2026-04-19 16:40:29,937 | INFO     | executing command: cat /etc/os-release
[2026-04-19 12:41:02] 2026-04-19 16:40:30,014 | INFO     | cat /etc/os-release:
[2026-04-19 12:41:02] NAME="CentOS Linux"
[2026-04-19 12:41:02] VERSION="7 (Core)"
[2026-04-19 12:41:02] ID="centos"
[2026-04-19 12:41:02] ID_LIKE="rhel fedora"
[2026-04-19 12:41:02] VERSION_ID="7"
[2026-04-19 12:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 12:41:02] ANSI_COLOR="0;31"
[2026-04-19 12:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 12:41:02] HOME_URL="https://www.centos.org/"
[2026-04-19 12:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 12:41:02] 
[2026-04-19 12:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 12:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 12:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 12:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 12:41:02] 
[2026-04-19 12:41:02] 2026-04-19 16:40:30,015 | INFO     | **************************************
[2026-04-19 12:41:02] 2026-04-19 16:40:30,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-19 12:41:02] 2026-04-19 16:40:30,562 | INFO     | sufficient remaining disk space (67562897408 B)
[2026-04-19 12:41:02] 2026-04-19 16:40:30,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 12:41:02] 2026-04-19 16:40:30,563 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 12:41:02] 2026-04-19 16:40:30,563 | INFO     | update_server=False
[2026-04-19 12:41:02] 2026-04-19 16:40:30,563 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 12:41:02] 2026-04-19 16:40:30,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 12:41:02] 2026-04-19 16:40:30,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 12:41:02] 2026-04-19 16:40:30,564 | INFO     | aborting loop
[2026-04-19 12:41:02] 2026-04-19 16:40:30,671 | INFO     | all job control threads have been joined
[2026-04-19 12:41:02] 2026-04-19 16:40:30,679 | INFO     | all data control threads have been joined
[2026-04-19 12:41:02] 2026-04-19 16:40:31,093 | INFO     | all payload control threads have been joined
[2026-04-19 12:41:02] 2026-04-19 16:40:31,569 | INFO     | [job] retrieve thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:31,570 | INFO     | [job] job monitor thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:31,618 | INFO     | [data] copytool_in thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:31,632 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:31,677 | INFO     | [job] control thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:31,685 | INFO     | [data] control thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,032 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,099 | INFO     | [payload] control thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,361 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,570 | INFO     | [data] copytool_out thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,639 | INFO     | [job] validate thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,679 | INFO     | [payload] validate_post thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:32,926 | INFO     | [payload] failed_post thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:33,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 12:41:02] 2026-04-19 16:40:33,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 12:41:02] 2026-04-19 16:40:34,484 | INFO     | [job] queue monitor thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:37,360 | INFO     | [monitor] cgroup control has ended
[2026-04-19 12:41:02] 2026-04-19 16:40:37,380 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 12:41:02] 2026-04-19 16:40:39,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357592151872)>', '<ExcThread(monitor, started 140357106919168)>']
[2026-04-19 12:41:02] 2026-04-19 16:40:44,074 | INFO     | all workflow threads have been joined
[2026-04-19 12:41:02] 2026-04-19 16:40:44,075 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 12:41:02] 2026-04-19 16:40:44,075 | INFO     | traces error code: 0
[2026-04-19 12:41:02] 2026-04-19 16:40:44,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 12:41:02] 2026-04-19 16:41:01,527 | INFO     | PID=788473 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-19 12:41:02] 2026-04-19 16:41:01,527 | INFO     | .. there are 12 such processes running
[2026-04-19 12:41:02] 2026-04-19 16:41:01,528 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 12:41:02] 2026-04-19 16:41:01,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 12:41:02] 2026-04-19 16:41:01,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 12:41:02] 2026-04-19 16:41:01,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 12:41:02] 2026-04-19 16:41:01,528 | INFO     | [monitor] control thread has ended
[2026-04-19 12:41:02] 2026-04-19 16:41:01,711 [wrapper] ==== pilot stdout END ====
[2026-04-19 12:41:02] 2026-04-19 16:41:01,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 12:41:02] 2026-04-19 16:41:01,724 [wrapper] pilotpid: 788473
[2026-04-19 12:41:02] 2026-04-19 16:41:01,728 [wrapper] Pilot exit status: 0
[2026-04-19 12:41:02] 2026-04-19 16:41:01,777 [wrapper] pandaids: 7102934296
[2026-04-19 12:41:02] 2026-04-19 16:41:01,861 [wrapper] cleanup supervisor_pilot 2148026 788474
[2026-04-19 12:41:02] 2026-04-19 16:41:01,865 [wrapper] Test setup, not cleaning
[2026-04-19 12:41:02] 2026-04-19 16:41:01,869 [wrapper] apfmon messages muted
[2026-04-19 12:41:02] 2026-04-19 16:41:01,872 [wrapper] ==== wrapper stdout END ====
[2026-04-19 12:41:02] 2026-04-19 16:41:01,875 [wrapper] ==== wrapper stderr END ====
[2026-04-19 12:41:02]  *** Error codes and diagnostics ***
[2026-04-19 12:41:02]     "exeErrorCode": 0,
[2026-04-19 12:41:02]     "pilotErrorCode": 0,
[2026-04-19 12:41:02]  *** Listing of results directory ***
[2026-04-19 12:41:02] total 2447588
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas     644190 Apr 19 03:40 pilot3.tar.gz
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas       5094 Apr 19 04:10 queuedata.json
[2026-04-19 12:41:02] -rwx------. 1 boincer umatlas      36322 Apr 19 04:11 runpilot2-wrapper.sh
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas        100 Apr 19 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 12:41:02] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 19 04:18 run_atlas
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas        105 Apr 19 04:18 job.xml
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas 2217434726 Apr 19 04:18 EVNT.49820373._000044.pool.root.1
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas      15665 Apr 19 04:18 start_atlas.sh
[2026-04-19 12:41:02] drwxrwx--x. 2 boincer umatlas       4096 Apr 19 04:18 shared
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas     656921 Apr 19 04:18 input.tar.gz
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas          0 Apr 19 04:18 boinc_lockfile
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas       2584 Apr 19 04:18 pandaJob.out
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas         57 Apr 19 04:18 setup.sh.local
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas     997681 Apr 19 04:18 agis_schedconf.cvmfs.json
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas        431 Apr 19 04:18 workernode_map.json
[2026-04-19 12:41:02] drwx------. 5 boincer umatlas       4096 Apr 19 04:18 pilot3
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas  278811646 Apr 19 12:39 HITS.49820375._007112.pool.root.1
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas        489 Apr 19 12:39 boinc_task_state.xml
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas       1047 Apr 19 12:40 memory_monitor_summary.json
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas    1512404 Apr 19 12:40 agis_ddmendpoints.agis.ALL.json
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas     690892 Apr 19 12:40 log.49820375._007112.job.log.tgz.1
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas       6400 Apr 19 12:40 heartbeat_new.json
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas       6291 Apr 19 12:40 heartbeat.json
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas       6621 Apr 19 12:40 init_data.xml
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas       8192 Apr 19 12:40 boinc_mmap_file
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas         28 Apr 19 12:40 wrapper_checkpoint.txt
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas         95 Apr 19 12:41 pilot_heartbeat.json
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas        822 Apr 19 12:41 pilotlog.txt
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas    2318866 Apr 19 12:41 log.49820375._007112.job.log.1
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas        357 Apr 19 12:41 output.list
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas        410 Apr 19 12:41 runtime_log
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas    3031040 Apr 19 12:41 result.tar.gz
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas       8951 Apr 19 12:41 runtime_log.err
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas        659 Apr 19 12:41 8e18f70eacab.diag
[2026-04-19 12:41:02] -rw-r--r--. 1 boincer umatlas      21185 Apr 19 12:41 stderr.txt
[2026-04-19 12:41:02] HITS file was successfully produced:
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas 278811646 Apr 19 12:39 shared/HITS.pool.root.1
[2026-04-19 12:41:02]  *** Contents of shared directory: ***
[2026-04-19 12:41:02] total 2441372
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas 2217434726 Apr 19 04:18 ATLAS.root_0
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas      15665 Apr 19 04:18 start_atlas.sh
[2026-04-19 12:41:02] -rw-r--r--. 2 boincer umatlas     656921 Apr 19 04:18 input.tar.gz
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas  278811646 Apr 19 12:39 HITS.pool.root.1
[2026-04-19 12:41:02] -rw-------. 1 boincer umatlas    3031040 Apr 19 12:41 result.tar.gz
12:41:04 (784800): run_atlas exited; CPU time 89681.022593
12:41:04 (784800): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN