Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:54 (11925): wrapper (7.7.26015): starting
16:21:54 (11925): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 16:21:54] Arguments: --nthreads 8
[2026-04-19 16:21:54] Threads: 8
[2026-04-19 16:21:54] Checking for CVMFS
[2026-04-19 16:21:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 16:21:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 16:21:56] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 16:21:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 16:21:58] 2.11.2.0 13025 5613 99360 158623 1 53 21933410 25165825 1027 130560 0 1192673 99.389 5345398 24193 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 16:21:58] CVMFS is ok
[2026-04-19 16:21:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 16:21:58] Checking for apptainer binary...
[2026-04-19 16:21:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 16:21:58] Running /usr/bin/apptainer --version
[2026-04-19 16:21:58] apptainer version 1.3.2-1.el7
[2026-04-19 16:21:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 16:22:30] cg-vwn387.simple-grid.lan
[2026-04-19 16:22:30] apptainer works
[2026-04-19 16:22:30] Set ATHENA_PROC_NUMBER=8
[2026-04-19 16:22:30] Set ATHENA_CORE_NUMBER=8
[2026-04-19 16:22:30] Starting ATLAS job with PandaID=7102971397
[2026-04-19 16:22:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 23:03:30]  *** The last 200 lines of the pilot log: ***
[2026-04-19 23:03:30] 2026-04-19 21:02:42,899 | INFO     | log transfer has been attempted: DONE
[2026-04-19 23:03:30] 2026-04-19 21:02:42,900 | INFO     | job 7102971397 has finished - writing final server update
[2026-04-19 23:03:30] 2026-04-19 21:02:42,900 | INFO     | total number of processed events: 400 (read)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,902 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7102971397/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,903 | INFO     | extracted standard info from prmon json
[2026-04-19 23:03:30] 2026-04-19 21:02:42,903 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 23:03:30] 2026-04-19 21:02:42,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 23:03:30] 2026-04-19 21:02:42,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 23:03:30] 2026-04-19 21:02:42,911 | INFO     | fitting pss+swap vs Time
[2026-04-19 23:03:30] 2026-04-19 21:02:42,912 | INFO     | sum of square deviations: 17284846875.5
[2026-04-19 23:03:30] 2026-04-19 21:02:42,917 | INFO     | sum of deviations: 221077028898.5
[2026-04-19 23:03:30] 2026-04-19 21:02:42,917 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,917 | INFO     | mean y: 2508306.976439791
[2026-04-19 23:03:30] 2026-04-19 21:02:42,917 | INFO     | intersect: 2508306.976439791
[2026-04-19 23:03:30] 2026-04-19 21:02:42,918 | INFO     | chi2: 9.675468472941283
[2026-04-19 23:03:30] 2026-04-19 21:02:42,919 | INFO     | sum of square deviations: 16614964548.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,923 | INFO     | sum of deviations: 243904298929.99997
[2026-04-19 23:03:30] 2026-04-19 21:02:42,924 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,924 | INFO     | mean y: 2513440.9814323606
[2026-04-19 23:03:30] 2026-04-19 21:02:42,924 | INFO     | intersect: 2513440.9814323606
[2026-04-19 23:03:30] 2026-04-19 21:02:42,924 | INFO     | chi2: 8.962399044705432
[2026-04-19 23:03:30] 2026-04-19 21:02:42,925 | INFO     | current chi2=8.962399044705432 (change=7.369869792145398 %)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,925 | INFO     | right removable region: 376
[2026-04-19 23:03:30] 2026-04-19 21:02:42,925 | INFO     | sum of square deviations: 16614964548.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,940 | INFO     | sum of deviations: 77167181909.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,940 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,941 | INFO     | mean y: 2541066.3129973477
[2026-04-19 23:03:30] 2026-04-19 21:02:42,941 | INFO     | intersect: 2541066.3129973477
[2026-04-19 23:03:30] 2026-04-19 21:02:42,941 | INFO     | chi2: 4.281526303867193
[2026-04-19 23:03:30] 2026-04-19 21:02:42,942 | INFO     | current chi2=4.281526303867193 (change=55.74864084523614 %)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,942 | INFO     | sum of square deviations: 15962617433.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,947 | INFO     | sum of deviations: -33569947365.999996
[2026-04-19 23:03:30] 2026-04-19 21:02:42,947 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,947 | INFO     | mean y: 2566933.4677419355
[2026-04-19 23:03:30] 2026-04-19 21:02:42,947 | INFO     | intersect: 2566933.4677419355
[2026-04-19 23:03:30] 2026-04-19 21:02:42,948 | INFO     | chi2: 1.2560052487331697
[2026-04-19 23:03:30] 2026-04-19 21:02:42,948 | INFO     | current chi2=1.2560052487331697 (change=70.66454437991632 %)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,949 | INFO     | sum of square deviations: 15327572968.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,953 | INFO     | sum of deviations: -60550460072.99999
[2026-04-19 23:03:30] 2026-04-19 21:02:42,953 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,953 | INFO     | mean y: 2573377.3433242505
[2026-04-19 23:03:30] 2026-04-19 21:02:42,953 | INFO     | intersect: 2573377.3433242505
[2026-04-19 23:03:30] 2026-04-19 21:02:42,954 | INFO     | chi2: 0.9659868862615142
[2026-04-19 23:03:30] 2026-04-19 21:02:42,954 | INFO     | current chi2=0.9659868862615142 (change=23.09053746106343 %)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,954 | INFO     | left removable region: 15
[2026-04-19 23:03:30] 2026-04-19 21:02:42,955 | INFO     | sum of square deviations: 14588031660.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,978 | INFO     | sum of deviations: -34895972075.99999
[2026-04-19 23:03:30] 2026-04-19 21:02:42,979 | INFO     | mean x (centered): 0.0
[2026-04-19 23:03:30] 2026-04-19 21:02:42,979 | INFO     | mean y: 2579640.6315789474
[2026-04-19 23:03:30] 2026-04-19 21:02:42,979 | INFO     | intersect: 2579640.6315789474
[2026-04-19 23:03:30] 2026-04-19 21:02:42,980 | INFO     | chi2: 0.18116924324584907
[2026-04-19 23:03:30] 2026-04-19 21:02:42,980 | INFO     | current memory leak: -2.39 B/s (using 361 data points, chi2=0.18)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,980 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | ..............................
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . Timing measurements:
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . get job = 0 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . initial setup = 112 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . payload setup = 229 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . stage-in = 0 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . payload execution = 23389 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . stage-out = 3 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,981 | INFO     | . log creation = 1 s
[2026-04-19 23:03:30] 2026-04-19 21:02:42,982 | INFO     | ..............................
[2026-04-19 23:03:30] 2026-04-19 21:02:43,131 | INFO     | 
[2026-04-19 23:03:30] 2026-04-19 21:02:43,131 | INFO     | job summary report
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | --------------------------------------------------
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | PanDA job id: 7102971397
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | task id: 49820244
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | errors: (none)
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | pilot state: finished 
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | transexitcode: 0
[2026-04-19 23:03:30] 2026-04-19 21:02:43,132 | INFO     | exeerrorcode: 0
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | exeerrordiag: 
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | exitcode: 0
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | exitmsg: OK
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | cpuconsumptiontime: 89742 s
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | nevents: 400
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | neventsw: 0
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | pid: 20363
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | pgrp: 20363
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | corecount: 8
[2026-04-19 23:03:30] 2026-04-19 21:02:43,133 | INFO     | event service: False
[2026-04-19 23:03:30] 2026-04-19 21:02:43,134 | INFO     | sizes: {0: 2281551, 1: 2260952, 2: 2283436, 12: 2283464, 23623: 2318411, 23628: 2327411, 23630: 2327595, 23631: 2327853}
[2026-04-19 23:03:30] 2026-04-19 21:02:43,134 | INFO     | --------------------------------------------------
[2026-04-19 23:03:30] 2026-04-19 21:02:43,134 | INFO     | 
[2026-04-19 23:03:30] 2026-04-19 21:02:43,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-19 23:03:30] 2026-04-19 21:02:43,722 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,722 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,722 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,722 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | job 7102971397 has completed (purged errors)
[2026-04-19 23:03:30] 2026-04-19 21:02:43,724 | INFO     | overall cleanup function is called
[2026-04-19 23:03:30] 2026-04-19 21:02:44,733 | INFO     | --- collectZombieJob: --- 10, [20363]
[2026-04-19 23:03:30] 2026-04-19 21:02:44,733 | INFO     | zombie collector waiting for pid 20363
[2026-04-19 23:03:30] 2026-04-19 21:02:44,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 23:03:30] 2026-04-19 21:02:44,734 | INFO     | collected zombie processes
[2026-04-19 23:03:30] 2026-04-19 21:02:44,734 | INFO     | will attempt to kill all subprocesses of pid=20363
[2026-04-19 23:03:30] 2026-04-19 21:02:44,809 | INFO     | process IDs to be killed: [20363] (in reverse order)
[2026-04-19 23:03:30] 2026-04-19 21:02:45,792 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 23:03:30] 2026-04-19 21:02:45,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 23:03:30] 2026-04-19 21:02:45,794 | INFO     | did not find any defunct processes belonging to 20363
[2026-04-19 23:03:30] 2026-04-19 21:02:45,796 | INFO     | did not find any defunct processes belonging to 20363
[2026-04-19 23:03:30] 2026-04-19 21:02:45,797 | INFO     | Ready for new job
[2026-04-19 23:03:30] 2026-04-19 21:02:45,799 | INFO     | **************************************
[2026-04-19 23:03:30] 2026-04-19 21:02:45,799 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 23:03:30] 2026-04-19 21:02:45,799 | INFO     | **************************************
[2026-04-19 23:03:30] 2026-04-19 21:02:45,799 | INFO     | 
[2026-04-19 23:03:30] 2026-04-19 21:02:45,800 | INFO     | pilot is running in a VM
[2026-04-19 23:03:30] 2026-04-19 21:02:45,800 | INFO     | architecture information:
[2026-04-19 23:03:30] 2026-04-19 21:02:45,819 | INFO     | executing command: cat /etc/os-release
[2026-04-19 23:03:30] 2026-04-19 21:02:46,103 | INFO     | cat /etc/os-release:
[2026-04-19 23:03:30] NAME="CentOS Linux"
[2026-04-19 23:03:30] VERSION="7 (Core)"
[2026-04-19 23:03:30] ID="centos"
[2026-04-19 23:03:30] ID_LIKE="rhel fedora"
[2026-04-19 23:03:30] VERSION_ID="7"
[2026-04-19 23:03:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 23:03:30] ANSI_COLOR="0;31"
[2026-04-19 23:03:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 23:03:30] HOME_URL="https://www.centos.org/"
[2026-04-19 23:03:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 23:03:30] 
[2026-04-19 23:03:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 23:03:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 23:03:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 23:03:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 23:03:30] 
[2026-04-19 23:03:30] 2026-04-19 21:02:46,103 | INFO     | **************************************
[2026-04-19 23:03:30] 2026-04-19 21:02:46,606 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-19 23:03:30] 2026-04-19 21:02:46,874 | INFO     | sufficient remaining disk space (489927213056 B)
[2026-04-19 23:03:30] 2026-04-19 21:02:46,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 23:03:30] 2026-04-19 21:02:46,875 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 23:03:30] 2026-04-19 21:02:46,875 | INFO     | update_server=False
[2026-04-19 23:03:30] 2026-04-19 21:02:46,875 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 23:03:30] 2026-04-19 21:02:46,985 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-19 23:03:30] 2026-04-19 21:02:46,986 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-19 23:03:30] 2026-04-19 21:02:46,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 23:03:30] 2026-04-19 21:02:46,986 | INFO     | will abort loop
[2026-04-19 23:03:30] 2026-04-19 21:02:47,225 | INFO     | all data control threads have been joined
[2026-04-19 23:03:30] 2026-04-19 21:02:47,880 | INFO     | [job] retrieve thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:47,951 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:47,991 | INFO     | [job] job monitor thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:48,043 | INFO     | [payload] failed_post thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:48,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 23:03:30] 2026-04-19 21:02:48,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 23:03:30] 2026-04-19 21:02:48,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 23:03:30] 2026-04-19 21:02:48,154 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:48,202 | INFO     | all payload control threads have been joined
[2026-04-19 23:03:30] 2026-04-19 21:02:48,207 | INFO     | [job] validate thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:48,231 | INFO     | [data] control thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:48,338 | INFO     | all job control threads have been joined
[2026-04-19 23:03:30] 2026-04-19 21:02:48,528 | INFO     | [payload] validate_post thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,037 | INFO     | [data] copytool_in thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,055 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,152 | INFO     | [job] queue monitor thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,208 | INFO     | [payload] control thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,344 | INFO     | [job] control thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:49,356 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:50,066 | INFO     | [data] copytool_out thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:02:52,090 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 23:03:30] 2026-04-19 21:03:16,301 | INFO     | PID=15930 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 23:03:30] 2026-04-19 21:03:16,301 | INFO     | .. there are 2 such processes running
[2026-04-19 23:03:30] 2026-04-19 21:03:16,302 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 23:03:30] 2026-04-19 21:03:16,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 23:03:30] 2026-04-19 21:03:16,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 23:03:30] 2026-04-19 21:03:19,251 | INFO     | [monitor] cgroup control has ended
[2026-04-19 23:03:30] 2026-04-19 21:03:20,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497410066240)>', '<ExcThread(monitor, started 140497191741184)>']
[2026-04-19 23:03:30] 2026-04-19 21:03:21,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 23:03:30] 2026-04-19 21:03:21,332 | INFO     | [monitor] control thread has ended
[2026-04-19 23:03:30] 2026-04-19 21:03:25,627 | INFO     | all workflow threads have been joined
[2026-04-19 23:03:30] 2026-04-19 21:03:25,627 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 23:03:30] 2026-04-19 21:03:25,628 | INFO     | traces error code: 0
[2026-04-19 23:03:30] 2026-04-19 21:03:25,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 23:03:30] 2026-04-19 21:03:26,077 [wrapper] ==== pilot stdout END ====
[2026-04-19 23:03:30] 2026-04-19 21:03:26,172 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 23:03:30] 2026-04-19 21:03:26,242 [wrapper] pilotpid: 15930
[2026-04-19 23:03:30] 2026-04-19 21:03:26,350 [wrapper] Pilot exit status: 0
[2026-04-19 23:03:30] 2026-04-19 21:03:26,879 [wrapper] pandaids: 7102971397
[2026-04-19 23:03:30] 2026-04-19 21:03:27,758 [wrapper] cleanup supervisor_pilot 27447 15931
[2026-04-19 23:03:30] 2026-04-19 21:03:27,841 [wrapper] Test setup, not cleaning
[2026-04-19 23:03:30] 2026-04-19 21:03:27,910 [wrapper] apfmon messages muted
[2026-04-19 23:03:30] 2026-04-19 21:03:27,970 [wrapper] ==== wrapper stdout END ====
[2026-04-19 23:03:30] 2026-04-19 21:03:28,066 [wrapper] ==== wrapper stderr END ====
[2026-04-19 23:03:30]  *** Error codes and diagnostics ***
[2026-04-19 23:03:30]     "exeErrorCode": 0,
[2026-04-19 23:03:30]     "pilotErrorCode": 0,
[2026-04-19 23:03:30]  *** Listing of results directory ***
[2026-04-19 23:03:30] total 2450568
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc     644190 Apr 19 09:40 pilot3.tar.gz
[2026-04-19 23:03:30] -rwx------. 1 boinc boinc      36322 Apr 19 10:02 runpilot2-wrapper.sh
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc       5094 Apr 19 10:02 queuedata.json
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc        100 Apr 19 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 23:03:30] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 16:21 run_atlas
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc        105 Apr 19 16:21 job.xml
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc 2222915413 Apr 19 16:21 EVNT.49820242._000047.pool.root.1
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc      15665 Apr 19 16:21 start_atlas.sh
[2026-04-19 23:03:30] drwxrwx--x. 2 boinc boinc         68 Apr 19 16:21 shared
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc     656907 Apr 19 16:21 input.tar.gz
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc       6307 Apr 19 16:21 init_data.xml
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc          0 Apr 19 16:21 boinc_lockfile
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc       2551 Apr 19 16:22 pandaJob.out
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc        415 Apr 19 16:28 workernode_map.json
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc     997326 Apr 19 16:28 agis_schedconf.cvmfs.json
[2026-04-19 23:03:30] drwx------. 5 boinc boinc       4096 Apr 19 16:28 pilot3
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc  277005354 Apr 19 23:00 HITS.49820244._008116.pool.root.1
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc        490 Apr 19 23:01 boinc_task_state.xml
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc       1012 Apr 19 23:02 memory_monitor_summary.json
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc    1512404 Apr 19 23:02 agis_ddmendpoints.agis.ALL.json
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc     538930 Apr 19 23:02 log.49820244._008116.job.log.tgz.1
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc       6336 Apr 19 23:02 heartbeat_new.json
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc       6227 Apr 19 23:02 heartbeat.json
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc       8192 Apr 19 23:03 boinc_mmap_file
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc         28 Apr 19 23:03 wrapper_checkpoint.txt
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc         95 Apr 19 23:03 pilot_heartbeat.json
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc       5066 Apr 19 23:03 pilotlog.txt
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc    2167369 Apr 19 23:03 log.49820244._008116.job.log.1
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc        357 Apr 19 23:03 output.list
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc        410 Apr 19 23:03 runtime_log
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc    2723840 Apr 19 23:03 result.tar.gz
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc       8454 Apr 19 23:03 runtime_log.err
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc        656 Apr 19 23:03 8c0b4728aaca.diag
[2026-04-19 23:03:30] -rw-r--r--. 1 boinc boinc      20641 Apr 19 23:03 stderr.txt
[2026-04-19 23:03:30] HITS file was successfully produced:
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc 277005354 Apr 19 23:00 shared/HITS.pool.root.1
[2026-04-19 23:03:30]  *** Contents of shared directory: ***
[2026-04-19 23:03:30] total 2444652
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc 2222915413 Apr 19 16:21 ATLAS.root_0
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc      15665 Apr 19 16:21 start_atlas.sh
[2026-04-19 23:03:30] -rw-r--r--. 2 boinc boinc     656907 Apr 19 16:21 input.tar.gz
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc  277005354 Apr 19 23:00 HITS.pool.root.1
[2026-04-19 23:03:30] -rw-------. 1 boinc boinc    2723840 Apr 19 23:03 result.tar.gz
23:03:31 (11925): run_atlas exited; CPU time 89960.444076
23:03:31 (11925): called boinc_finish(0)

</stderr_txt>
]]>

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