Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:58:02 (2676): wrapper (7.7.26015): starting
20:58:02 (2676): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 20:58:02] Arguments: --nthreads 8
[2026-04-19 20:58:02] Threads: 8
[2026-04-19 20:58:02] Checking for CVMFS
[2026-04-19 20:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 20:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 20:58:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 20:58:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 20:58:06] 2.11.2.0 32757 5874 97628 158629 2 53 22387421 25165824 1027 130560 0 1564910 99.511 5198729 4786 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 20:58:06] CVMFS is ok
[2026-04-19 20:58:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 20:58:06] Checking for apptainer binary...
[2026-04-19 20:58:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 20:58:06] Running /usr/bin/apptainer --version
[2026-04-19 20:58:06] apptainer version 1.3.2-1.el7
[2026-04-19 20:58:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 20:58:23] cg-vwn430.simple-grid.lan
[2026-04-19 20:58:23] apptainer works
[2026-04-19 20:58:23] Set ATHENA_PROC_NUMBER=8
[2026-04-19 20:58:23] Set ATHENA_CORE_NUMBER=8
[2026-04-19 20:58:24] Starting ATLAS job with PandaID=7102935856
[2026-04-19 20:58:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 03:32:35]  *** The last 200 lines of the pilot log: ***
[2026-04-20 03:32:35] 2026-04-20 01:31:33,616 | INFO     | this job has now completed (state=finished)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,616 | INFO     | log transfer has been attempted: DONE
[2026-04-20 03:32:35] 2026-04-20 01:31:33,616 | INFO     | job 7102935856 has finished - writing final server update
[2026-04-20 03:32:35] 2026-04-20 01:31:33,616 | INFO     | total number of processed events: 400 (read)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,618 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7102935856/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,619 | INFO     | extracted standard info from prmon json
[2026-04-20 03:32:35] 2026-04-20 01:31:33,619 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 03:32:35] 2026-04-20 01:31:33,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 03:32:35] 2026-04-20 01:31:33,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 03:32:35] 2026-04-20 01:31:33,627 | INFO     | fitting pss+swap vs Time
[2026-04-20 03:32:35] 2026-04-20 01:31:33,628 | INFO     | sum of square deviations: 16221466937.5
[2026-04-20 03:32:35] 2026-04-20 01:31:33,633 | INFO     | sum of deviations: 169160355624.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,636 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,637 | INFO     | mean y: 2520029.7860962567
[2026-04-20 03:32:35] 2026-04-20 01:31:33,637 | INFO     | intersect: 2520029.7860962567
[2026-04-20 03:32:35] 2026-04-20 01:31:33,637 | INFO     | chi2: 7.507566528810398
[2026-04-20 03:32:35] 2026-04-20 01:31:33,638 | INFO     | sum of square deviations: 15579529320.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,643 | INFO     | sum of deviations: 191813984367.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,643 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,643 | INFO     | mean y: 2525345.8834688347
[2026-04-20 03:32:35] 2026-04-20 01:31:33,643 | INFO     | intersect: 2525345.8834688347
[2026-04-20 03:32:35] 2026-04-20 01:31:33,644 | INFO     | chi2: 6.77784742489907
[2026-04-20 03:32:35] 2026-04-20 01:31:33,644 | INFO     | current chi2=6.77784742489907 (change=9.719782050695388 %)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,644 | INFO     | right removable region: 368
[2026-04-20 03:32:35] 2026-04-20 01:31:33,645 | INFO     | sum of square deviations: 15579529320.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,649 | INFO     | sum of deviations: 34801017097.000015
[2026-04-20 03:32:35] 2026-04-20 01:31:33,649 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,649 | INFO     | mean y: 2551932.7696476965
[2026-04-20 03:32:35] 2026-04-20 01:31:33,650 | INFO     | intersect: 2551932.7696476965
[2026-04-20 03:32:35] 2026-04-20 01:31:33,650 | INFO     | chi2: 2.7616833234874294
[2026-04-20 03:32:35] 2026-04-20 01:31:33,650 | INFO     | current chi2=2.7616833234874294 (change=63.21466732409991 %)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,651 | INFO     | sum of square deviations: 14954754815.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,655 | INFO     | sum of deviations: -43191887042.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,655 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,656 | INFO     | mean y: 2570914.521978022
[2026-04-20 03:32:35] 2026-04-20 01:31:33,656 | INFO     | intersect: 2570914.521978022
[2026-04-20 03:32:35] 2026-04-20 01:31:33,656 | INFO     | chi2: 1.0004054711399741
[2026-04-20 03:32:35] 2026-04-20 01:31:33,657 | INFO     | current chi2=1.0004054711399741 (change=63.77551826338036 %)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,657 | INFO     | sum of square deviations: 14346910860.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,662 | INFO     | sum of deviations: -59293558367.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,662 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,662 | INFO     | mean y: 2574948.4484679666
[2026-04-20 03:32:35] 2026-04-20 01:31:33,662 | INFO     | intersect: 2574948.4484679666
[2026-04-20 03:32:35] 2026-04-20 01:31:33,663 | INFO     | chi2: 0.9196238969950766
[2026-04-20 03:32:35] 2026-04-20 01:31:33,663 | INFO     | current chi2=0.9196238969950766 (change=8.074883282360094 %)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,663 | INFO     | left removable region: 15
[2026-04-20 03:32:35] 2026-04-20 01:31:33,668 | INFO     | sum of square deviations: 13639518992.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,672 | INFO     | sum of deviations: -34527108919.00001
[2026-04-20 03:32:35] 2026-04-20 01:31:33,672 | INFO     | mean x (centered): 0.0
[2026-04-20 03:32:35] 2026-04-20 01:31:33,672 | INFO     | mean y: 2581266.4390934845
[2026-04-20 03:32:35] 2026-04-20 01:31:33,673 | INFO     | intersect: 2581266.4390934845
[2026-04-20 03:32:35] 2026-04-20 01:31:33,673 | INFO     | chi2: 0.13567053491871575
[2026-04-20 03:32:35] 2026-04-20 01:31:33,673 | INFO     | current memory leak: -2.53 B/s (using 353 data points, chi2=0.14)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,674 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,674 | INFO     | ..............................
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . Timing measurements:
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . get job = 0 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . initial setup = 121 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . payload setup = 273 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . stage-in = 0 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . payload execution = 22911 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . stage-out = 4 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | . log creation = 1 s
[2026-04-20 03:32:35] 2026-04-20 01:31:33,675 | INFO     | ..............................
[2026-04-20 03:32:35] 2026-04-20 01:31:33,998 | INFO     | 
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | job summary report
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | --------------------------------------------------
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | PanDA job id: 7102935856
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | task id: 49820244
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | errors: (none)
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | pilot state: finished 
[2026-04-20 03:32:35] 2026-04-20 01:31:33,999 | INFO     | transexitcode: 0
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | exeerrorcode: 0
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | exeerrordiag: 
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | exitcode: 0
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | exitmsg: OK
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | cpuconsumptiontime: 88336 s
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | nevents: 400
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | neventsw: 0
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | pid: 11097
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | pgrp: 11097
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | corecount: 8
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | event service: False
[2026-04-20 03:32:35] 2026-04-20 01:31:34,000 | INFO     | sizes: {0: 2280949, 1: 2281861, 2: 2283463, 12: 2283463, 23189: 2318145, 23194: 2327143, 23197: 2327327, 23198: 2327521}
[2026-04-20 03:32:35] 2026-04-20 01:31:34,001 | INFO     | --------------------------------------------------
[2026-04-20 03:32:35] 2026-04-20 01:31:34,001 | INFO     | 
[2026-04-20 03:32:35] 2026-04-20 01:31:34,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-20 03:32:35] 2026-04-20 01:31:34,649 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | job 7102935856 has completed (purged errors)
[2026-04-20 03:32:35] 2026-04-20 01:31:34,651 | INFO     | overall cleanup function is called
[2026-04-20 03:32:35] 2026-04-20 01:31:35,661 | INFO     | --- collectZombieJob: --- 10, [11097]
[2026-04-20 03:32:35] 2026-04-20 01:31:35,662 | INFO     | zombie collector waiting for pid 11097
[2026-04-20 03:32:35] 2026-04-20 01:31:35,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 03:32:35] 2026-04-20 01:31:35,662 | INFO     | collected zombie processes
[2026-04-20 03:32:35] 2026-04-20 01:31:35,662 | INFO     | will attempt to kill all subprocesses of pid=11097
[2026-04-20 03:32:35] 2026-04-20 01:31:35,744 | INFO     | process IDs to be killed: [11097] (in reverse order)
[2026-04-20 03:32:35] 2026-04-20 01:31:36,679 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 03:32:35] 2026-04-20 01:31:36,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 03:32:35] 2026-04-20 01:31:36,682 | INFO     | did not find any defunct processes belonging to 11097
[2026-04-20 03:32:35] 2026-04-20 01:31:36,683 | INFO     | did not find any defunct processes belonging to 11097
[2026-04-20 03:32:35] 2026-04-20 01:31:36,683 | INFO     | Ready for new job
[2026-04-20 03:32:35] 2026-04-20 01:31:36,685 | INFO     | **************************************
[2026-04-20 03:32:35] 2026-04-20 01:31:36,686 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 03:32:35] 2026-04-20 01:31:36,686 | INFO     | **************************************
[2026-04-20 03:32:35] 2026-04-20 01:31:36,686 | INFO     | 
[2026-04-20 03:32:35] 2026-04-20 01:31:36,686 | INFO     | pilot is running in a VM
[2026-04-20 03:32:35] 2026-04-20 01:31:36,687 | INFO     | architecture information:
[2026-04-20 03:32:35] 2026-04-20 01:31:36,687 | INFO     | executing command: cat /etc/os-release
[2026-04-20 03:32:35] 2026-04-20 01:31:36,967 | INFO     | cat /etc/os-release:
[2026-04-20 03:32:35] NAME="CentOS Linux"
[2026-04-20 03:32:35] VERSION="7 (Core)"
[2026-04-20 03:32:35] ID="centos"
[2026-04-20 03:32:35] ID_LIKE="rhel fedora"
[2026-04-20 03:32:35] VERSION_ID="7"
[2026-04-20 03:32:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 03:32:35] ANSI_COLOR="0;31"
[2026-04-20 03:32:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 03:32:35] HOME_URL="https://www.centos.org/"
[2026-04-20 03:32:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 03:32:35] 
[2026-04-20 03:32:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 03:32:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 03:32:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 03:32:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 03:32:35] 
[2026-04-20 03:32:35] 2026-04-20 01:31:36,967 | INFO     | **************************************
[2026-04-20 03:32:35] 2026-04-20 01:31:37,471 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-20 03:32:35] 2026-04-20 01:31:37,747 | INFO     | sufficient remaining disk space (491581865984 B)
[2026-04-20 03:32:35] 2026-04-20 01:31:37,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 03:32:35] 2026-04-20 01:31:37,748 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 03:32:35] 2026-04-20 01:31:37,748 | INFO     | update_server=False
[2026-04-20 03:32:35] 2026-04-20 01:31:37,748 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 03:32:35] 2026-04-20 01:31:37,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:32:35] 2026-04-20 01:31:37,750 | INFO     | aborting loop
[2026-04-20 03:32:35] 2026-04-20 01:31:38,064 | INFO     | all data control threads have been joined
[2026-04-20 03:32:35] 2026-04-20 01:31:38,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 03:32:35] 2026-04-20 01:31:38,179 | INFO     | all payload control threads have been joined
[2026-04-20 03:32:35] 2026-04-20 01:31:38,755 | INFO     | [job] retrieve thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:38,756 | INFO     | [job] job monitor thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:38,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:32:35] 2026-04-20 01:31:38,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 03:32:35] 2026-04-20 01:31:38,951 | INFO     | [payload] validate_post thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,071 | INFO     | [data] control thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,085 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,186 | INFO     | [payload] control thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,461 | INFO     | all job control threads have been joined
[2026-04-20 03:32:35] 2026-04-20 01:31:39,640 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,760 | INFO     | [job] validate thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,784 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:39,852 | INFO     | [job] queue monitor thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:40,064 | INFO     | [payload] failed_post thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:40,115 | INFO     | [data] copytool_out thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:40,117 | INFO     | [data] copytool_in thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:40,210 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:40,468 | INFO     | [job] control thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:31:42,914 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 03:32:35] 2026-04-20 01:32:07,639 | INFO     | PID=6651 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-20 03:32:35] 2026-04-20 01:32:07,640 | INFO     | .. there are 2 such processes running
[2026-04-20 03:32:35] 2026-04-20 01:32:07,640 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 03:32:35] 2026-04-20 01:32:07,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 03:32:35] 2026-04-20 01:32:07,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 03:32:35] 2026-04-20 01:32:22,502 | INFO     | [monitor] cgroup control has ended
[2026-04-20 03:32:35] 2026-04-20 01:32:24,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139897390912)>', '<ExcThread(monitor, started 140139456087808)>']
[2026-04-20 03:32:35] 2026-04-20 01:32:24,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 03:32:35] 2026-04-20 01:32:24,744 | INFO     | [monitor] control thread has ended
[2026-04-20 03:32:35] 2026-04-20 01:32:29,092 | INFO     | all workflow threads have been joined
[2026-04-20 03:32:35] 2026-04-20 01:32:29,093 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 03:32:35] 2026-04-20 01:32:29,093 | INFO     | traces error code: 0
[2026-04-20 03:32:35] 2026-04-20 01:32:29,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 03:32:35] 2026-04-20 01:32:29,559 [wrapper] ==== pilot stdout END ====
[2026-04-20 03:32:35] 2026-04-20 01:32:29,663 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 03:32:35] 2026-04-20 01:32:29,741 [wrapper] pilotpid: 6651
[2026-04-20 03:32:35] 2026-04-20 01:32:29,800 [wrapper] Pilot exit status: 0
[2026-04-20 03:32:35] 2026-04-20 01:32:30,313 [wrapper] pandaids: 7102935856
[2026-04-20 03:32:35] 2026-04-20 01:32:31,710 [wrapper] cleanup supervisor_pilot 18005 6652
[2026-04-20 03:32:35] 2026-04-20 01:32:31,814 [wrapper] Test setup, not cleaning
[2026-04-20 03:32:35] 2026-04-20 01:32:31,892 [wrapper] apfmon messages muted
[2026-04-20 03:32:35] 2026-04-20 01:32:31,979 [wrapper] ==== wrapper stdout END ====
[2026-04-20 03:32:35] 2026-04-20 01:32:32,084 [wrapper] ==== wrapper stderr END ====
[2026-04-20 03:32:35]  *** Error codes and diagnostics ***
[2026-04-20 03:32:35]     "exeErrorCode": 0,
[2026-04-20 03:32:35]     "pilotErrorCode": 0,
[2026-04-20 03:32:35]  *** Listing of results directory ***
[2026-04-20 03:32:35] total 2471732
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc     644190 Apr 19 07:41 pilot3.tar.gz
[2026-04-20 03:32:35] -rwx------. 1 boinc boinc      36322 Apr 19 07:43 runpilot2-wrapper.sh
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc       5094 Apr 19 07:55 queuedata.json
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc        100 Apr 19 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 03:32:35] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 20:58 run_atlas
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc        105 Apr 19 20:58 job.xml
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc 2243810005 Apr 19 20:58 EVNT.49820242._000044.pool.root.1
[2026-04-20 03:32:35] drwxrwx--x. 2 boinc boinc         68 Apr 19 20:58 shared
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc     656909 Apr 19 20:58 input.tar.gz
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc       6306 Apr 19 20:58 init_data.xml
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc      15665 Apr 19 20:58 start_atlas.sh
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc          0 Apr 19 20:58 boinc_lockfile
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc       2551 Apr 19 20:58 pandaJob.out
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc        415 Apr 19 21:04 workernode_map.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc     997729 Apr 19 21:04 agis_schedconf.cvmfs.json
[2026-04-20 03:32:35] drwx------. 5 boinc boinc       4096 Apr 19 21:04 pilot3
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc  277644354 Apr 20 03:29 HITS.49820244._007696.pool.root.1
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc        490 Apr 20 03:30 boinc_task_state.xml
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc       1015 Apr 20 03:31 memory_monitor_summary.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc    1512404 Apr 20 03:31 agis_ddmendpoints.agis.ALL.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc     650009 Apr 20 03:31 log.49820244._007696.job.log.tgz.1
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc       6341 Apr 20 03:31 heartbeat_new.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc       6232 Apr 20 03:31 heartbeat.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc         95 Apr 20 03:32 pilot_heartbeat.json
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc       4878 Apr 20 03:32 pilotlog.txt
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc       8192 Apr 20 03:32 boinc_mmap_file
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc         28 Apr 20 03:32 wrapper_checkpoint.txt
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc    2124299 Apr 20 03:32 log.49820244._007696.job.log.1
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc        357 Apr 20 03:32 output.list
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc        410 Apr 20 03:32 runtime_log
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc    2795520 Apr 20 03:32 result.tar.gz
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc       8438 Apr 20 03:32 runtime_log.err
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc        656 Apr 20 03:32 6b7281c2f498.diag
[2026-04-20 03:32:35] -rw-r--r--. 1 boinc boinc      20633 Apr 20 03:32 stderr.txt
[2026-04-20 03:32:35] HITS file was successfully produced:
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc 277644354 Apr 20 03:29 shared/HITS.pool.root.1
[2026-04-20 03:32:35]  *** Contents of shared directory: ***
[2026-04-20 03:32:35] total 2465756
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc 2243810005 Apr 19 20:58 ATLAS.root_0
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc     656909 Apr 19 20:58 input.tar.gz
[2026-04-20 03:32:35] -rw-r--r--. 2 boinc boinc      15665 Apr 19 20:58 start_atlas.sh
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc  277644354 Apr 20 03:29 HITS.pool.root.1
[2026-04-20 03:32:35] -rw-------. 1 boinc boinc    2795520 Apr 20 03:32 result.tar.gz
03:32:36 (2676): run_atlas exited; CPU time 88545.471819
03:32:36 (2676): called boinc_finish(0)

</stderr_txt>
]]>

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