Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:33 (2778638): wrapper (7.7.26015): starting
11:37:33 (2778638): wrapper: running run_atlas (--nthreads 3)
[2026-04-19 11:37:33] Arguments: --nthreads 3
[2026-04-19 11:37:33] Threads: 3
[2026-04-19 11:37:33] Checking for CVMFS
[2026-04-19 11:37:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 11:37:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 11:37:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 11:37:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 11:37:34] 2.9.2.0 2545772 1564 73912 158615 3 49 26987089 36864000 0 130560 0 775240 99.985 55745 16477 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-19 11:37:34] CVMFS is ok
[2026-04-19 11:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 11:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 11:37:34] Further information can be found at the LHC@home message board.
[2026-04-19 11:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 11:37:34] Checking for apptainer binary...
[2026-04-19 11:37:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 11:37:34] Running /usr/bin/apptainer --version
[2026-04-19 11:37:34] apptainer version 1.4.1-1.1
[2026-04-19 11:37:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 11:37:34] cosA121a
[2026-04-19 11:37:34] apptainer works
[2026-04-19 11:37:34] Set ATHENA_PROC_NUMBER=3
[2026-04-19 11:37:34] Set ATHENA_CORE_NUMBER=3
[2026-04-19 11:37:34] Starting ATLAS job with PandaID=7102873943
[2026-04-19 11:37:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 14:07:01]  *** The last 200 lines of the pilot log: ***
[2026-04-19 14:07:01] 2026-04-19 12:06:13,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 14:07:01] 2026-04-19 12:06:13,539 | INFO     | [payload] failed_post thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:13,557 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:13,812 | INFO     | [job] job monitor thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:13,825 | INFO     | [data] control thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,040 | INFO     | [payload] control thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,217 | INFO     | [job] control thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,289 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,349 | INFO     | [job] validate thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,513 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,537 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:14,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 14:07:01] 2026-04-19 12:06:15,467 | INFO     | [data] copytool_out thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:18,769 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 14:07:01] 2026-04-19 12:06:42,267 | INFO     | PID=2782718 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 14:07:01] 2026-04-19 12:06:42,268 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 14:07:01] 2026-04-19 12:06:42,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 14:07:01] 2026-04-19 12:06:42,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 14:07:01] 2026-04-19 12:06:54,187 | INFO     | [monitor] cgroup control has ended
[2026-04-19 14:07:01] 2026-04-19 12:06:55,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375790085952)>', '<ExcThread(monitor, started 140375008200448)>']
[2026-04-19 14:07:01] 2026-04-19 12:06:56,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 14:07:01] 2026-04-19 12:06:56,339 | INFO     | [monitor] control thread has ended
[2026-04-19 14:07:01] 2026-04-19 12:07:00,943 | INFO     | all workflow threads have been joined
[2026-04-19 14:07:01] 2026-04-19 12:07:00,944 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 14:07:01] 2026-04-19 12:07:00,944 | INFO     | traces error code: 0
[2026-04-19 14:07:01] 2026-04-19 12:07:00,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 14:07:01] 2026-04-19 12:07:00,999 [wrapper] ==== pilot stdout END ====
[2026-04-19 14:07:01] 2026-04-19 12:07:01,001 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 14:07:01] 2026-04-19 12:07:01,004 [wrapper] pilotpid: 2782718
[2026-04-19 14:07:01] 2026-04-19 12:07:01,006 [wrapper] Pilot exit status: 0
[2026-04-19 14:07:01] 2026-04-19 12:07:01,013 [wrapper] pandaids: 7102873943
[2026-04-19 14:07:01] 2026-04-19 12:07:01,035 [wrapper] cleanup supervisor_pilot 2796536 2782719
[2026-04-19 14:07:01] 2026-04-19 12:07:01,038 [wrapper] Test setup, not cleaning
[2026-04-19 14:07:01] 2026-04-19 12:07:01,040 [wrapper] apfmon messages muted
[2026-04-19 14:07:01] 2026-04-19 12:07:01,043 [wrapper] ==== wrapper stdout END ====
[2026-04-19 14:07:01] 2026-04-19 12:07:01,045 [wrapper] ==== wrapper stderr END ====
[2026-04-19 14:07:01]  *** Error codes and diagnostics ***
[2026-04-19 14:07:01]     "exeErrorCode": 0,
[2026-04-19 14:07:01]     "pilotErrorCode": 0,
[2026-04-19 14:07:01]  *** Listing of results directory ***
[2026-04-19 14:07:01] total 2475488
[2026-04-19 14:07:01] -rwx------ 1 boinc boinc      36322 Apr 19 07:41 runpilot2-wrapper.sh
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc     644190 Apr 19 07:41 pilot3.tar.gz
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       5094 Apr 19 07:42 queuedata.json
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc        100 Apr 19 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 14:07:01] -rwxr-xr-x 1 boinc boinc       7986 Apr 19 11:37 run_atlas
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc        105 Apr 19 11:37 job.xml
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc 2255848660 Apr 19 11:37 EVNT.49820242._000030.pool.root.1
[2026-04-19 14:07:01] drwxrwx--x 2 boinc boinc       4096 Apr 19 11:37 shared
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc     656903 Apr 19 11:37 input.tar.gz
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc      15665 Apr 19 11:37 start_atlas.sh
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc          0 Apr 19 11:37 boinc_setup_complete
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       6356 Apr 19 11:37 init_data.xml
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc          0 Apr 19 11:37 boinc_lockfile
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       2551 Apr 19 11:37 pandaJob.out
[2026-04-19 14:07:01] -rw------- 1 boinc boinc     997671 Apr 19 11:37 agis_schedconf.cvmfs.json
[2026-04-19 14:07:01] -rw------- 1 boinc boinc    1512404 Apr 19 11:37 agis_ddmendpoints.agis.ALL.json
[2026-04-19 14:07:01] -rw------- 1 boinc boinc        429 Apr 19 11:37 workernode_map.json
[2026-04-19 14:07:01] drwx------ 5 boinc boinc       4096 Apr 19 11:37 pilot3
[2026-04-19 14:07:01] -rw------- 1 boinc boinc  272439153 Apr 19 14:05 HITS.49820244._005250.pool.root.1
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc        488 Apr 19 14:05 boinc_task_state.xml
[2026-04-19 14:07:01] -rw------- 1 boinc boinc       1026 Apr 19 14:06 memory_monitor_summary.json
[2026-04-19 14:07:01] -rw------- 1 boinc boinc     449228 Apr 19 14:06 log.49820244._005250.job.log.tgz.1
[2026-04-19 14:07:01] -rw------- 1 boinc boinc       6346 Apr 19 14:06 heartbeat_new.json
[2026-04-19 14:07:01] -rw------- 1 boinc boinc       6237 Apr 19 14:06 heartbeat.json
[2026-04-19 14:07:01] -rw------- 1 boinc boinc         95 Apr 19 14:06 pilot_heartbeat.json
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc         27 Apr 19 14:06 wrapper_checkpoint.txt
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       8192 Apr 19 14:06 boinc_mmap_file
[2026-04-19 14:07:01] -rw------- 1 boinc boinc       4747 Apr 19 14:07 pilotlog.txt
[2026-04-19 14:07:01] -rw------- 1 boinc boinc     831748 Apr 19 14:07 log.49820244._005250.job.log.1
[2026-04-19 14:07:01] -rw------- 1 boinc boinc        357 Apr 19 14:07 output.list
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc        410 Apr 19 14:07 runtime_log
[2026-04-19 14:07:01] -rw------- 1 boinc boinc    1300480 Apr 19 14:07 result.tar.gz
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       8528 Apr 19 14:07 runtime_log.err
[2026-04-19 14:07:01] -rw------- 1 boinc boinc        660 Apr 19 14:07 6b2489f47ae3.diag
[2026-04-19 14:07:01] -rw-r--r-- 1 boinc boinc       6074 Apr 19 14:07 stderr.txt
[2026-04-19 14:07:01] HITS file was successfully produced:
[2026-04-19 14:07:01] -rw------- 1 boinc boinc 272439153 Apr 19 14:05 shared/HITS.pool.root.1
[2026-04-19 14:07:01]  *** Contents of shared directory: ***
[2026-04-19 14:07:01] total 2470976
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc 2255848660 Apr 19 11:37 ATLAS.root_0
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc     656903 Apr 19 11:37 input.tar.gz
[2026-04-19 14:07:01] -rw-r--r-- 2 boinc boinc      15665 Apr 19 11:37 start_atlas.sh
[2026-04-19 14:07:01] -rw------- 1 boinc boinc  272439153 Apr 19 14:05 HITS.pool.root.1
[2026-04-19 14:07:01] -rw------- 1 boinc boinc    1300480 Apr 19 14:07 result.tar.gz
14:07:02 (2778638): run_atlas exited; CPU time 25751.151635
14:07:02 (2778638): called boinc_finish(0)

</stderr_txt>
]]>

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