Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:53:33 (1499548): wrapper (7.7.26015): starting
23:53:33 (1499548): wrapper: running run_atlas (--nthreads 12)
[2026-04-18 23:53:33] Arguments: --nthreads 12
[2026-04-18 23:53:33] Threads: 12
[2026-04-18 23:53:33] Checking for CVMFS
[2026-04-18 23:53:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 23:53:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 23:53:33] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 23:53:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 23:53:33] 2.13.3.0 9017 11208 368272 158598 1 25 36037838 46080000 1996 130560 0 64327363 99.836 25422545 27229 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-04-18 23:53:33] CVMFS is ok
[2026-04-18 23:53:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 23:53:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 23:53:33] Further information can be found at the LHC@home message board.
[2026-04-18 23:53:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 23:53:33] Checking for apptainer binary...
[2026-04-18 23:53:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 23:53:33] Running /usr/bin/apptainer --version
[2026-04-18 23:53:33] apptainer version 1.4.5-3.el9
[2026-04-18 23:53:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 23:53:33] mff2101.farm.particle.cz
[2026-04-18 23:53:33] apptainer works
[2026-04-18 23:53:33] Set ATHENA_PROC_NUMBER=12
[2026-04-18 23:53:33] Set ATHENA_CORE_NUMBER=12
[2026-04-18 23:53:33] Starting ATLAS job with PandaID=7090857627
[2026-04-18 23:53:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 00:38:01]  *** The last 200 lines of the pilot log: ***
[2026-04-19 00:38:01]  mtime=0
[2026-04-19 00:38:01]  protocol_id=None
[2026-04-19 00:38:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-19 00:38:01]  replicas=None
[2026-04-19 00:38:01]  scope=mc23_13p6TeV
[2026-04-19 00:38:01]  status=None
[2026-04-19 00:38:01]  status_code=0
[2026-04-19 00:38:01]  storage_token=
[2026-04-19 00:38:01]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-7090857627/log.49263200._069116.job.log.tgz.1
[2026-04-19 00:38:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/2c/log.49263200._069116.job.log.tgz.1
[2026-04-19 00:38:01]  workdir=None
[2026-04-19 00:38:01] ]
[2026-04-19 00:38:01] 2026-04-18 22:37:28,180 | INFO     | transferring file log.49263200._069116.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-7090857627/log.49263200._069116.job.log.tgz.1 to /scratch/.boinc/slot
[2026-04-19 00:38:01] 2026-04-18 22:37:28,180 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-7090857627/log.49263200._069116.job.log.tgz.1 /scratch/.boinc/slots/2/log.49263200._069116.j
[2026-04-19 00:38:01] 2026-04-18 22:37:28,198 | INFO     | adding to output.list: log.49263200._069116.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/2c/log.49263200._069116.job.log.tg
[2026-04-19 00:38:01] 2026-04-18 22:37:28,198 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-19 00:38:01] 2026-04-18 22:37:28,198 | INFO     | summary of transferred files:
[2026-04-19 00:38:01] 2026-04-18 22:37:28,199 | INFO     |  -- lfn=log.49263200._069116.job.log.tgz.1, status_code=0, status=transferred
[2026-04-19 00:38:01] 2026-04-18 22:37:28,199 | INFO     | stage-out finished correctly
[2026-04-19 00:38:01] 2026-04-18 22:37:28,904 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-19 00:38:01] 2026-04-18 22:37:28,967 | INFO     | job 7090857627 has state=finished
[2026-04-19 00:38:01] 2026-04-18 22:37:28,967 | INFO     | preparing for final server update for job 7090857627 in state='finished'
[2026-04-19 00:38:01] 2026-04-18 22:37:28,967 | INFO     | reading metadata from: /scratch/.boinc/slots/2/PanDA_Pilot-7090857627/jobReport.json
[2026-04-19 00:38:01] 2026-04-18 22:37:28,969 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/2/workernode_map.json
[2026-04-19 00:38:01] 2026-04-18 22:37:28,969 | INFO     | this job has now completed (state=finished)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,969 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,969 | INFO     | log transfer has been attempted: DONE
[2026-04-19 00:38:01] 2026-04-18 22:37:28,969 | INFO     | job 7090857627 has finished - writing final server update
[2026-04-19 00:38:01] 2026-04-18 22:37:28,970 | INFO     | total number of processed events: 400 (read)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,981 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-7090857627/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,981 | INFO     | extracted standard info from prmon json
[2026-04-19 00:38:01] 2026-04-18 22:37:28,981 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 00:38:01] 2026-04-18 22:37:28,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 00:38:01] 2026-04-18 22:37:28,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 00:38:01] 2026-04-18 22:37:28,982 | INFO     | fitting pss+swap vs Time
[2026-04-19 00:38:01] 2026-04-18 22:37:28,982 | INFO     | sum of square deviations: 14456085.0
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | sum of deviations: -424529439.0
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | mean x (centered): 0.0
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | mean y: 2708137.277777778
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | intersect: 2708137.277777778
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | chi2: 0.002507175010686456
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | current memory leak: -29.37 B/s (using 36 data points, chi2=0.00)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | could have reported an average CPU frequency of 2436 MHz (5 samples)
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | ..............................
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . Timing measurements:
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . get job = 0 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . initial setup = 4 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . payload setup = 7 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . stage-in = 0 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . payload execution = 2599 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,983 | INFO     | . stage-out = 0 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,984 | INFO     | . log creation = 0 s
[2026-04-19 00:38:01] 2026-04-18 22:37:28,984 | INFO     | ..............................
[2026-04-19 00:38:01] 2026-04-18 22:37:29,042 | INFO     | 
[2026-04-19 00:38:01] 2026-04-18 22:37:29,042 | INFO     | job summary report
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | --------------------------------------------------
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | PanDA job id: 7090857627
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | task id: 49263200
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | errors: (none)
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | pilot state: finished 
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | transexitcode: 0
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | exeerrorcode: 0
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | exeerrordiag: 
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | exitcode: 0
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | exitmsg: OK
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | cpuconsumptiontime: 27611 s
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | nevents: 400
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | neventsw: 0
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | pid: 1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | pgrp: 1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | corecount: 12
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | event service: False
[2026-04-19 00:38:01] 2026-04-18 22:37:29,043 | INFO     | sizes: {0: 2281761, 1: 2283419, 11: 2283419, 2611: 2317665, 2612: 2317891}
[2026-04-19 00:38:01] 2026-04-18 22:37:29,044 | INFO     | --------------------------------------------------
[2026-04-19 00:38:01] 2026-04-18 22:37:29,044 | INFO     | 
[2026-04-19 00:38:01] 2026-04-18 22:37:29,044 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | job 7090857627 has completed (purged errors)
[2026-04-19 00:38:01] 2026-04-18 22:37:29,065 | INFO     | overall cleanup function is called
[2026-04-19 00:38:01] 2026-04-18 22:37:30,075 | INFO     | --- collectZombieJob: --- 10, [1537956]
[2026-04-19 00:38:01] 2026-04-18 22:37:30,075 | INFO     | zombie collector waiting for pid 1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:30,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 00:38:01] 2026-04-18 22:37:30,075 | INFO     | collected zombie processes
[2026-04-19 00:38:01] 2026-04-18 22:37:30,075 | INFO     | will attempt to kill all subprocesses of pid=1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:30,275 | INFO     | process IDs to be killed: [1537956] (in reverse order)
[2026-04-19 00:38:01] 2026-04-18 22:37:30,356 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 00:38:01] 2026-04-18 22:37:30,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 00:38:01] 2026-04-18 22:37:30,364 | INFO     | did not find any defunct processes belonging to 1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:30,370 | INFO     | did not find any defunct processes belonging to 1537956
[2026-04-19 00:38:01] 2026-04-18 22:37:30,370 | INFO     | Ready for new job
[2026-04-19 00:38:01] 2026-04-18 22:37:30,371 | INFO     | **************************************
[2026-04-19 00:38:01] 2026-04-18 22:37:30,372 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 00:38:01] 2026-04-18 22:37:30,372 | INFO     | **************************************
[2026-04-19 00:38:01] 2026-04-18 22:37:30,372 | INFO     | 
[2026-04-19 00:38:01] 2026-04-18 22:37:30,377 | INFO     | architecture information:
[2026-04-19 00:38:01] 2026-04-18 22:37:30,377 | INFO     | executing command: cat /etc/os-release
[2026-04-19 00:38:01] 2026-04-18 22:37:30,391 | INFO     | cat /etc/os-release:
[2026-04-19 00:38:01] NAME="CentOS Linux"
[2026-04-19 00:38:01] VERSION="7 (Core)"
[2026-04-19 00:38:01] ID="centos"
[2026-04-19 00:38:01] ID_LIKE="rhel fedora"
[2026-04-19 00:38:01] VERSION_ID="7"
[2026-04-19 00:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 00:38:01] ANSI_COLOR="0;31"
[2026-04-19 00:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 00:38:01] HOME_URL="https://www.centos.org/"
[2026-04-19 00:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 00:38:01] 
[2026-04-19 00:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 00:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 00:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 00:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 00:38:01] 
[2026-04-19 00:38:01] 2026-04-18 22:37:30,391 | INFO     | **************************************
[2026-04-19 00:38:01] 2026-04-18 22:37:30,894 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-04-19 00:38:01] 2026-04-18 22:37:30,910 | INFO     | sufficient remaining disk space (1685380399104 B)
[2026-04-19 00:38:01] 2026-04-18 22:37:30,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 00:38:01] 2026-04-18 22:37:30,910 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 00:38:01] 2026-04-18 22:37:30,910 | INFO     | update_server=False
[2026-04-19 00:38:01] 2026-04-18 22:37:30,910 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 00:38:01] 2026-04-18 22:37:30,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 00:38:01] 2026-04-18 22:37:30,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 00:38:01] 2026-04-18 22:37:31,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 00:38:01] 2026-04-18 22:37:31,426 | INFO     | all data control threads have been joined
[2026-04-19 00:38:01] 2026-04-18 22:37:31,464 | INFO     | all job control threads have been joined
[2026-04-19 00:38:01] 2026-04-18 22:37:31,917 | INFO     | [job] retrieve thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:31,917 | INFO     | [job] queue monitor thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:31,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,171 | INFO     | all payload control threads have been joined
[2026-04-19 00:38:01] 2026-04-18 22:37:32,306 | INFO     | [job] validate thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,432 | INFO     | [data] control thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,470 | INFO     | [job] control thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,550 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,594 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,594 | INFO     | [payload] failed_post thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:32,817 | INFO     | [data] copytool_in thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:33,082 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:33,176 | INFO     | [payload] control thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:33,269 | INFO     | [data] copytool_out thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:33,450 | INFO     | [payload] validate_post thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:34,037 | WARNING  | process 1537956 can no longer be monitored (due to stat problems) - aborting
[2026-04-19 00:38:01] 2026-04-18 22:37:34,196 | INFO     | using path: /scratch/.boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 00:38:01] 2026-04-18 22:37:34,197 | INFO     | using path: /scratch/.boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 00:38:01] 2026-04-18 22:37:34,197 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-19 00:38:01] 2026-04-18 22:37:34,197 | WARNING  | maxPSS not found in memory monitor output
[2026-04-19 00:38:01] 2026-04-18 22:37:34,197 | INFO     | skipping file size check of payload stdout file (/scratch/.boinc/slots/2/PanDA_Pilot-7090857627/payload.stdout) since it has not been created yet
[2026-04-19 00:38:01] 2026-04-18 22:37:34,197 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-04-19 00:38:01] 2026-04-18 22:37:34,213 | INFO     | sufficient remaining disk space (1685380399104 B)
[2026-04-19 00:38:01] 2026-04-18 22:37:34,213 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-19 00:38:01] 2026-04-18 22:37:34,213 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/2/PanDA_Pilot-7090857627/HITS.49263200._069116.pool.root.1 since it does not exist
[2026-04-19 00:38:01] 2026-04-18 22:37:34,415 | INFO     | number of running child processes to parent process 1537956: 1
[2026-04-19 00:38:01] 2026-04-18 22:37:34,415 | INFO     | maximum number of monitored processes: 6
[2026-04-19 00:38:01] 2026-04-18 22:37:34,415 | INFO     | aborting job monitoring since job object (job id=7090857627) has expired
[2026-04-19 00:38:01] 2026-04-18 22:37:34,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 00:38:01] 2026-04-18 22:37:34,415 | INFO     | will abort loop
[2026-04-19 00:38:01] 2026-04-18 22:37:34,918 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:35,421 | INFO     | [job] job monitor thread has finished
[2026-04-19 00:38:01] 2026-04-18 22:37:49,239 | INFO     | [monitor] cgroup control has ended
[2026-04-19 00:38:01] 2026-04-18 22:37:50,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340090722112)>', '<ExcThread(monitor, started 140339700545280)>']
[2026-04-19 00:38:01] 2026-04-18 22:37:55,955 | INFO     | all workflow threads have been joined
[2026-04-19 00:38:01] 2026-04-18 22:37:55,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 00:38:01] 2026-04-18 22:37:55,955 | INFO     | traces error code: 0
[2026-04-19 00:38:01] 2026-04-18 22:37:55,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 00:38:01] 2026-04-18 22:38:01,490 | INFO     | PID=1511502 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | INFO     | .. there are 6 such processes running
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 00:38:01] 2026-04-18 22:38:01,491 | INFO     | [monitor] control thread has ended
[2026-04-19 00:38:01] 2026-04-18 22:38:01,591 [wrapper] ==== pilot stdout END ====
[2026-04-19 00:38:01] 2026-04-18 22:38:01,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 00:38:01] 2026-04-18 22:38:01,596 [wrapper] pilotpid: 1511502
[2026-04-19 00:38:01] 2026-04-18 22:38:01,598 [wrapper] Pilot exit status: 0
[2026-04-19 00:38:01] 2026-04-18 22:38:01,605 [wrapper] pandaids: 7090857627
[2026-04-19 00:38:01] 2026-04-18 22:38:01,659 [wrapper] cleanup supervisor_pilot 1571670 1511503
[2026-04-19 00:38:01] 2026-04-18 22:38:01,662 [wrapper] Test setup, not cleaning
[2026-04-19 00:38:01] 2026-04-18 22:38:01,664 [wrapper] apfmon messages muted
[2026-04-19 00:38:01] 2026-04-18 22:38:01,665 [wrapper] ==== wrapper stdout END ====
[2026-04-19 00:38:01] 2026-04-18 22:38:01,667 [wrapper] ==== wrapper stderr END ====
[2026-04-19 00:38:01]  *** Error codes and diagnostics ***
[2026-04-19 00:38:01]     "exeErrorCode": 0,
[2026-04-19 00:38:01]     "pilotErrorCode": 0,
[2026-04-19 00:38:01]  *** Listing of results directory ***
[2026-04-19 00:38:01] total 414132
[2026-04-19 00:38:01] -rwx------ 1 boinc boinc     36322 Apr 18 16:18 runpilot2-wrapper.sh
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc    644190 Apr 18 16:36 pilot3.tar.gz
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc      5094 Apr 18 16:39 queuedata.json
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc       100 Apr 18 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 00:38:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 23:53 run_atlas
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc       105 Apr 18 23:53 job.xml
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc 221236567 Apr 18 23:53 EVNT.49263198._001323.pool.root.1
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc      6593 Apr 18 23:53 init_data.xml
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc     15665 Apr 18 23:53 start_atlas.sh
[2026-04-19 00:38:01] drwxrwx--x 2 boinc boinc      4096 Apr 18 23:53 shared
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc    656938 Apr 18 23:53 input.tar.gz
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc         0 Apr 18 23:53 boinc_lockfile
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc      2576 Apr 18 23:53 pandaJob.out
[2026-04-19 00:38:01] -rw------- 1 boinc boinc    997676 Apr 18 23:53 agis_schedconf.cvmfs.json
[2026-04-19 00:38:01] -rw------- 1 boinc boinc   1512404 Apr 18 23:53 agis_ddmendpoints.agis.ALL.json
[2026-04-19 00:38:01] -rw------- 1 boinc boinc       436 Apr 18 23:53 workernode_map.json
[2026-04-19 00:38:01] drwx------ 5 boinc boinc      4096 Apr 18 23:53 pilot3
[2026-04-19 00:38:01] -rw------- 1 boinc boinc 197513062 Apr 19 00:37 HITS.49263200._069116.pool.root.1
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc       487 Apr 19 00:37 boinc_task_state.xml
[2026-04-19 00:38:01] -rw------- 1 boinc boinc      1015 Apr 19 00:37 memory_monitor_summary.json
[2026-04-19 00:38:01] -rw------- 1 boinc boinc    350417 Apr 19 00:37 log.49263200._069116.job.log.tgz.1
[2026-04-19 00:38:01] -rw------- 1 boinc boinc      6353 Apr 19 00:37 heartbeat_new.json
[2026-04-19 00:38:01] -rw------- 1 boinc boinc      6244 Apr 19 00:37 heartbeat.json
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc      8192 Apr 19 00:38 boinc_mmap_file
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc        27 Apr 19 00:38 wrapper_checkpoint.txt
[2026-04-19 00:38:01] -rw------- 1 boinc boinc       822 Apr 19 00:38 pilotlog.txt
[2026-04-19 00:38:01] -rw------- 1 boinc boinc        95 Apr 19 00:38 pilot_heartbeat.json
[2026-04-19 00:38:01] -rw------- 1 boinc boinc    282384 Apr 19 00:38 log.49263200._069116.job.log.1
[2026-04-19 00:38:01] -rw------- 1 boinc boinc       357 Apr 19 00:38 output.list
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc       410 Apr 19 00:38 runtime_log
[2026-04-19 00:38:01] -rw------- 1 boinc boinc    655360 Apr 19 00:38 result.tar.gz
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc      8501 Apr 19 00:38 runtime_log.err
[2026-04-19 00:38:01] -rw------- 1 boinc boinc       662 Apr 19 00:38 929dfb999328.diag
[2026-04-19 00:38:01] -rw-r--r-- 1 boinc boinc     21826 Apr 19 00:38 stderr.txt
[2026-04-19 00:38:01] HITS file was successfully produced:
[2026-04-19 00:38:01] -rw------- 1 boinc boinc 197513062 Apr 19 00:37 shared/HITS.pool.root.1
[2026-04-19 00:38:01]  *** Contents of shared directory: ***
[2026-04-19 00:38:01] total 410244
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc 221236567 Apr 18 23:53 ATLAS.root_0
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc     15665 Apr 18 23:53 start_atlas.sh
[2026-04-19 00:38:01] -rw-r--r-- 2 boinc boinc    656938 Apr 18 23:53 input.tar.gz
[2026-04-19 00:38:01] -rw------- 1 boinc boinc 197513062 Apr 19 00:37 HITS.pool.root.1
[2026-04-19 00:38:01] -rw------- 1 boinc boinc    655360 Apr 19 00:38 result.tar.gz
00:38:02 (1499548): run_atlas exited; CPU time 27661.658787
00:38:02 (1499548): called boinc_finish(0)

</stderr_txt>
]]>

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