Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:13:00 (765466): wrapper (7.7.26015): starting
01:13:00 (765466): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 01:13:00] Arguments: --nthreads 4
[2026-04-20 01:13:00] Threads: 4
[2026-04-20 01:13:00] Checking for CVMFS
[2026-04-20 01:13:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 01:13:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 01:13:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 01:13:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 01:13:04] 2.13.2.0 13030 2598 47312 158488 1 188 3675401 4194304 922 130560 0 3081256 99.999 3274 7 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-04-20 01:13:04] CVMFS is ok
[2026-04-20 01:13:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 01:13:04] Checking for apptainer binary...
[2026-04-20 01:13:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 01:13:04] Running /usr/bin/apptainer --version
[2026-04-20 01:13:04] apptainer version 1.4.0
[2026-04-20 01:13:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 01:13:04] rubble
[2026-04-20 01:13:04] apptainer works
[2026-04-20 01:13:04] Set ATHENA_PROC_NUMBER=4
[2026-04-20 01:13:04] Set ATHENA_CORE_NUMBER=4
[2026-04-20 01:13:04] Starting ATLAS job with PandaID=7101020548
[2026-04-20 01:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 03:47:44]  *** The last 200 lines of the pilot log: ***
[2026-04-20 03:47:44] 2026-04-20 03:47:23,896 | INFO     | total number of processed events: 400 (read)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,898 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7101020548/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,898 | INFO     | extracted standard info from prmon json
[2026-04-20 03:47:44] 2026-04-20 03:47:23,898 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 03:47:44] 2026-04-20 03:47:23,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 03:47:44] 2026-04-20 03:47:23,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 03:47:44] 2026-04-20 03:47:23,899 | INFO     | fitting pss+swap vs Time
[2026-04-20 03:47:44] 2026-04-20 03:47:23,899 | INFO     | sum of square deviations: 1088905998.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,899 | INFO     | sum of deviations: 44758207649.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | mean y: 2551798.75
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | intersect: 2551798.75
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | chi2: 2.496069725861809
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | sum of square deviations: 984941258.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | sum of deviations: 49168696932.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | mean y: 2557860.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | intersect: 2557860.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | chi2: 1.8628794024862998
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | current chi2=1.8628794024862998 (change=25.367493416350378 %)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,900 | INFO     | sum of square deviations: 887813855.5
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | sum of deviations: 43074414645.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | mean y: 2548289.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | intersect: 2548289.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | chi2: 1.8559262707345958
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | current chi2=1.8559262707345958 (change=0.3732464775993525 %)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | right removable region: 141
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | sum of square deviations: 984941258.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | sum of deviations: 14713978848.000002
[2026-04-20 03:47:44] 2026-04-20 03:47:23,901 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | mean y: 2595388.5986394556
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | intersect: 2595388.5986394556
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | chi2: 0.7417277027792277
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | current chi2=0.7417277027792277 (change=70.28417535399039 %)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | sum of square deviations: 887813855.5
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | sum of deviations: 11975088333.5
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | mean y: 2599655.795774648
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | intersect: 2599655.795774648
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | chi2: 0.7379412093516372
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | current chi2=0.7379412093516372 (change=0.5104964279212791 %)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | left removable region: 10
[2026-04-20 03:47:44] 2026-04-20 03:47:23,902 | INFO     | sum of square deviations: 697054930.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | sum of deviations: 11597079659.999998
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | mean x (centered): 0.0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | mean y: 2597763.3664122135
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | intersect: 2597763.3664122135
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | chi2: 0.05613488515591453
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | current memory leak: 16.64 B/s (using 131 data points, chi2=0.06)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | could have reported an average CPU frequency of 3712 MHz (9 samples)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | ..............................
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . Timing measurements:
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . get job = 0 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . initial setup = 7 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . payload setup = 4 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . stage-in = 0 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . payload execution = 9217 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . stage-out = 0 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | . log creation = 0 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,903 | INFO     | ..............................
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | 
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | job summary report
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | --------------------------------------------------
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | PanDA job id: 7101020548
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | task id: 49820375
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | errors: (none)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | pilot state: finished 
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | transexitcode: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | exeerrorcode: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | exeerrordiag: 
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | exitcode: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | exitmsg: OK
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | cpuconsumptiontime: 35413 s
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | nevents: 400
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | neventsw: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | pid: 773983
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | pgrp: 773983
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | corecount: 4
[2026-04-20 03:47:44] 2026-04-20 03:47:23,941 | INFO     | event service: False
[2026-04-20 03:47:44] 2026-04-20 03:47:23,942 | INFO     | sizes: {0: 2280981, 1: 2283474, 11: 2283474, 9225: 2311994, 9226: 2321006, 9227: 2321448}
[2026-04-20 03:47:44] 2026-04-20 03:47:23,942 | INFO     | --------------------------------------------------
[2026-04-20 03:47:44] 2026-04-20 03:47:23,942 | INFO     | 
[2026-04-20 03:47:44] 2026-04-20 03:47:23,942 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | job 7101020548 has completed (purged errors)
[2026-04-20 03:47:44] 2026-04-20 03:47:23,957 | INFO     | overall cleanup function is called
[2026-04-20 03:47:44] 2026-04-20 03:47:24,964 | INFO     | --- collectZombieJob: --- 10, [773983]
[2026-04-20 03:47:44] 2026-04-20 03:47:24,964 | INFO     | zombie collector waiting for pid 773983
[2026-04-20 03:47:44] 2026-04-20 03:47:24,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 03:47:44] 2026-04-20 03:47:24,965 | INFO     | collected zombie processes
[2026-04-20 03:47:44] 2026-04-20 03:47:24,965 | INFO     | will attempt to kill all subprocesses of pid=773983
[2026-04-20 03:47:44] 2026-04-20 03:47:24,993 | INFO     | process IDs to be killed: [773983] (in reverse order)
[2026-04-20 03:47:44] 2026-04-20 03:47:25,016 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 03:47:44] 2026-04-20 03:47:25,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 03:47:44] 2026-04-20 03:47:25,017 | INFO     | did not find any defunct processes belonging to 773983
[2026-04-20 03:47:44] 2026-04-20 03:47:25,018 | INFO     | did not find any defunct processes belonging to 773983
[2026-04-20 03:47:44] 2026-04-20 03:47:25,018 | INFO     | Ready for new job
[2026-04-20 03:47:44] 2026-04-20 03:47:25,019 | INFO     | **************************************
[2026-04-20 03:47:44] 2026-04-20 03:47:25,019 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 03:47:44] 2026-04-20 03:47:25,019 | INFO     | **************************************
[2026-04-20 03:47:44] 2026-04-20 03:47:25,019 | INFO     | 
[2026-04-20 03:47:44] 2026-04-20 03:47:25,020 | INFO     | architecture information:
[2026-04-20 03:47:44] 2026-04-20 03:47:25,020 | INFO     | executing command: cat /etc/os-release
[2026-04-20 03:47:44] 2026-04-20 03:47:25,029 | INFO     | cat /etc/os-release:
[2026-04-20 03:47:44] NAME="CentOS Linux"
[2026-04-20 03:47:44] VERSION="7 (Core)"
[2026-04-20 03:47:44] ID="centos"
[2026-04-20 03:47:44] ID_LIKE="rhel fedora"
[2026-04-20 03:47:44] VERSION_ID="7"
[2026-04-20 03:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 03:47:44] ANSI_COLOR="0;31"
[2026-04-20 03:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 03:47:44] HOME_URL="https://www.centos.org/"
[2026-04-20 03:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 03:47:44] 
[2026-04-20 03:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 03:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 03:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 03:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 03:47:44] 
[2026-04-20 03:47:44] 2026-04-20 03:47:25,029 | INFO     | **************************************
[2026-04-20 03:47:44] 2026-04-20 03:47:25,532 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-04-20 03:47:44] 2026-04-20 03:47:25,543 | INFO     | sufficient remaining disk space (255830523904 B)
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | INFO     | update_server=False
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 03:47:44] 2026-04-20 03:47:25,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 03:47:44] 2026-04-20 03:47:25,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 03:47:44] 2026-04-20 03:47:26,522 | INFO     | all data control threads have been joined
[2026-04-20 03:47:44] 2026-04-20 03:47:26,549 | INFO     | [job] retrieve thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,550 | INFO     | [job] queue monitor thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,552 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,632 | INFO     | [payload] failed_post thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,660 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,724 | INFO     | [data] copytool_in thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:26,835 | WARNING  | process 773983 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 03:47:44] 2026-04-20 03:47:26,857 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 03:47:44] 2026-04-20 03:47:26,884 | INFO     | number of running child processes to parent process 773983: 1
[2026-04-20 03:47:44] 2026-04-20 03:47:26,884 | INFO     | maximum number of monitored processes: 6
[2026-04-20 03:47:44] 2026-04-20 03:47:26,884 | INFO     | aborting job monitoring since job object (job id=7101020548) has expired
[2026-04-20 03:47:44] 2026-04-20 03:47:26,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:47:44] 2026-04-20 03:47:26,884 | INFO     | will abort loop
[2026-04-20 03:47:44] 2026-04-20 03:47:26,963 | INFO     | all payload control threads have been joined
[2026-04-20 03:47:44] 2026-04-20 03:47:27,236 | INFO     | all job control threads have been joined
[2026-04-20 03:47:44] 2026-04-20 03:47:27,258 | INFO     | [payload] validate_post thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:27,528 | INFO     | [data] control thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:27,551 | INFO     | [data] copytool_out thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:27,813 | INFO     | [job] validate thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:27,890 | INFO     | [job] job monitor thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:27,969 | INFO     | [payload] control thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:28,011 | INFO     | job.realtimelogging is not enabled
[2026-04-20 03:47:44] 2026-04-20 03:47:28,052 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:28,243 | INFO     | [job] control thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:29,017 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:29,552 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 03:47:44] 2026-04-20 03:47:38,714 | INFO     | [monitor] cgroup control has ended
[2026-04-20 03:47:44] 2026-04-20 03:47:39,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136273537378112)>', '<ExcThread(monitor, started 136273045997312)>']
[2026-04-20 03:47:44] 2026-04-20 03:47:39,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 03:47:44] 2026-04-20 03:47:39,611 | INFO     | [monitor] control thread has ended
[2026-04-20 03:47:44] 2026-04-20 03:47:44,237 | INFO     | all workflow threads have been joined
[2026-04-20 03:47:44] 2026-04-20 03:47:44,237 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 03:47:44] 2026-04-20 03:47:44,237 | INFO     | traces error code: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:44,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 03:47:44] 2026-04-20 03:47:44,286 [wrapper] ==== pilot stdout END ====
[2026-04-20 03:47:44] 2026-04-20 03:47:44,288 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 03:47:44] 2026-04-20 03:47:44,290 [wrapper] pilotpid: 769553
[2026-04-20 03:47:44] 2026-04-20 03:47:44,291 [wrapper] Pilot exit status: 0
[2026-04-20 03:47:44] 2026-04-20 03:47:44,296 [wrapper] pandaids: 7101020548
[2026-04-20 03:47:44] 2026-04-20 03:47:44,309 [wrapper] cleanup supervisor_pilot  780576 769554
[2026-04-20 03:47:44] 2026-04-20 03:47:44,310 [wrapper] Test setup, not cleaning
[2026-04-20 03:47:44] 2026-04-20 03:47:44,312 [wrapper] apfmon messages muted
[2026-04-20 03:47:44] 2026-04-20 03:47:44,313 [wrapper] ==== wrapper stdout END ====
[2026-04-20 03:47:44] 2026-04-20 03:47:44,314 [wrapper] ==== wrapper stderr END ====
[2026-04-20 03:47:44]  *** Error codes and diagnostics ***
[2026-04-20 03:47:44]     "exeErrorCode": 0,
[2026-04-20 03:47:44]     "pilotErrorCode": 0,
[2026-04-20 03:47:44]  *** Listing of results directory ***
[2026-04-20 03:47:44] total 2457988
[2026-04-20 03:47:44] -rwx------ 1 boinc boinc      36322 Apr 18 12:57 runpilot2-wrapper.sh
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc     644190 Apr 18 13:37 pilot3.tar.gz
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc       5094 Apr 18 13:46 queuedata.json
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc        100 Apr 20 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 03:47:44] -rwxr-xr-x 1 boinc boinc       7986 Apr 20 01:12 run_atlas
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc        105 Apr 20 01:12 job.xml
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc 2235544243 Apr 20 01:13 EVNT.49820373._000015.pool.root.1
[2026-04-20 03:47:44] drwxrwx--x 2 boinc boinc       4096 Apr 20 01:13 shared
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc     656922 Apr 20 01:13 input.tar.gz
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc      15665 Apr 20 01:13 start_atlas.sh
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc          0 Apr 20 01:13 boinc_setup_complete
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc       9657 Apr 20 01:13 init_data.xml
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc          0 Apr 20 01:13 boinc_lockfile
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc       2584 Apr 20 01:13 pandaJob.out
[2026-04-20 03:47:44] -rw------- 1 boinc boinc         50 Apr 20 01:13 setup.sh.local
[2026-04-20 03:47:44] -rw------- 1 boinc boinc     997908 Apr 20 01:13 agis_schedconf.cvmfs.json
[2026-04-20 03:47:44] -rw------- 1 boinc boinc    1512404 Apr 20 01:13 agis_ddmendpoints.agis.ALL.json
[2026-04-20 03:47:44] -rw------- 1 boinc boinc        417 Apr 20 01:13 workernode_map.json
[2026-04-20 03:47:44] drwx------ 5 boinc boinc       4096 Apr 20 01:13 pilot3
[2026-04-20 03:47:44] -rw------- 1 boinc boinc         95 Apr 20 03:46 pilot_heartbeat.json
[2026-04-20 03:47:44] -rw------- 1 boinc boinc  274903175 Apr 20 03:46 HITS.49820375._001984.pool.root.1
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc        488 Apr 20 03:47 boinc_task_state.xml
[2026-04-20 03:47:44] -rw------- 1 boinc boinc       1019 Apr 20 03:47 memory_monitor_summary.json
[2026-04-20 03:47:44] -rw------- 1 boinc boinc     339449 Apr 20 03:47 log.49820375._001984.job.log.tgz.1
[2026-04-20 03:47:44] -rw------- 1 boinc boinc       6293 Apr 20 03:47 heartbeat_new.json
[2026-04-20 03:47:44] -rw------- 1 boinc boinc       6184 Apr 20 03:47 heartbeat.json
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc       8192 Apr 20 03:47 boinc_mmap_file
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc         27 Apr 20 03:47 wrapper_checkpoint.txt
[2026-04-20 03:47:44] -rw------- 1 boinc boinc       5153 Apr 20 03:47 pilotlog.txt
[2026-04-20 03:47:44] -rw------- 1 boinc boinc     888896 Apr 20 03:47 log.49820375._001984.job.log.1
[2026-04-20 03:47:44] -rw------- 1 boinc boinc        357 Apr 20 03:47 output.list
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc        410 Apr 20 03:47 runtime_log
[2026-04-20 03:47:44] -rw------- 1 boinc boinc    1249280 Apr 20 03:47 result.tar.gz
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc       9009 Apr 20 03:47 runtime_log.err
[2026-04-20 03:47:44] -rw------- 1 boinc boinc        643 Apr 20 03:47 7fc952b4e7f7.diag
[2026-04-20 03:47:44] -rw-r--r-- 1 boinc boinc      20576 Apr 20 03:47 stderr.txt
[2026-04-20 03:47:44] HITS file was successfully produced:
[2026-04-20 03:47:44] -rw------- 1 boinc boinc 274903175 Apr 20 03:46 shared/HITS.pool.root.1
[2026-04-20 03:47:44]  *** Contents of shared directory: ***
[2026-04-20 03:47:44] total 2453504
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc 2235544243 Apr 20 01:13 ATLAS.root_0
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc     656922 Apr 20 01:13 input.tar.gz
[2026-04-20 03:47:44] -rw-r--r-- 2 boinc boinc      15665 Apr 20 01:13 start_atlas.sh
[2026-04-20 03:47:44] -rw------- 1 boinc boinc  274903175 Apr 20 03:46 HITS.pool.root.1
[2026-04-20 03:47:44] -rw------- 1 boinc boinc    1249280 Apr 20 03:47 result.tar.gz
03:47:45 (765466): run_atlas exited; CPU time 35442.355493
03:47:45 (765466): called boinc_finish(0)

</stderr_txt>
]]>

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