Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:14:32 (1536): wrapper (7.7.26015): starting
08:14:32 (1536): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 08:14:32] Arguments: --nthreads 8
[2026-04-19 08:14:32] Threads: 8
[2026-04-19 08:14:32] Checking for CVMFS
[2026-04-19 08:14:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 08:14:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 08:14:33] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 08:14:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 08:14:33] 2.11.2.0 13298 5117 95392 158610 1 65 25143798 25165825 15 130560 0 1279575 99.860 3583209 27891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 08:14:33] CVMFS is ok
[2026-04-19 08:14:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 08:14:33] Checking for apptainer binary...
[2026-04-19 08:14:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 08:14:33] Running /usr/bin/apptainer --version
[2026-04-19 08:14:33] apptainer version 1.3.2-1.el7
[2026-04-19 08:14:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 08:14:34] cg-vwn457.simple-grid.lan
[2026-04-19 08:14:34] apptainer works
[2026-04-19 08:14:34] Set ATHENA_PROC_NUMBER=8
[2026-04-19 08:14:34] Set ATHENA_CORE_NUMBER=8
[2026-04-19 08:14:34] Starting ATLAS job with PandaID=7101062986
[2026-04-19 08:14:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 14:47:48]  *** The last 200 lines of the pilot log: ***
[2026-04-19 14:47:48] 2026-04-19 12:47:09,894 | INFO     | log transfer has been attempted: DONE
[2026-04-19 14:47:48] 2026-04-19 12:47:09,894 | INFO     | job 7101062986 has finished - writing final server update
[2026-04-19 14:47:48] 2026-04-19 12:47:09,894 | INFO     | total number of processed events: 400 (read)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,896 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7101062986/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,897 | INFO     | extracted standard info from prmon json
[2026-04-19 14:47:48] 2026-04-19 12:47:09,897 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 14:47:48] 2026-04-19 12:47:09,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 14:47:48] 2026-04-19 12:47:09,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 14:47:48] 2026-04-19 12:47:09,905 | INFO     | fitting pss+swap vs Time
[2026-04-19 14:47:48] 2026-04-19 12:47:09,906 | INFO     | sum of square deviations: 17833534372.5
[2026-04-19 14:47:48] 2026-04-19 12:47:09,913 | INFO     | sum of deviations: -79131003342.99998
[2026-04-19 14:47:48] 2026-04-19 12:47:09,914 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,914 | INFO     | mean y: 2568461.725388601
[2026-04-19 14:47:48] 2026-04-19 12:47:09,914 | INFO     | intersect: 2568461.725388601
[2026-04-19 14:47:48] 2026-04-19 12:47:09,915 | INFO     | chi2: 3.6126292978351575
[2026-04-19 14:47:48] 2026-04-19 12:47:09,915 | INFO     | sum of square deviations: 17149456430.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,920 | INFO     | sum of deviations: -21831796787.999996
[2026-04-19 14:47:48] 2026-04-19 12:47:09,920 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,920 | INFO     | mean y: 2581135.1653543306
[2026-04-19 14:47:48] 2026-04-19 12:47:09,920 | INFO     | intersect: 2581135.1653543306
[2026-04-19 14:47:48] 2026-04-19 12:47:09,921 | INFO     | chi2: 1.832994049846187
[2026-04-19 14:47:48] 2026-04-19 12:47:09,921 | INFO     | current chi2=1.832994049846187 (change=49.26149630285633 %)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,922 | INFO     | sum of square deviations: 16483099750.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,926 | INFO     | sum of deviations: -21270110923.00003
[2026-04-19 14:47:48] 2026-04-19 12:47:09,926 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,926 | INFO     | mean y: 2581263.7180851065
[2026-04-19 14:47:48] 2026-04-19 12:47:09,927 | INFO     | intersect: 2581263.7180851065
[2026-04-19 14:47:48] 2026-04-19 12:47:09,927 | INFO     | chi2: 1.832794708658003
[2026-04-19 14:47:48] 2026-04-19 12:47:09,927 | INFO     | current chi2=1.832794708658003 (change=0.010875168318234058 %)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,927 | INFO     | right removable region: 375
[2026-04-19 14:47:48] 2026-04-19 12:47:09,928 | INFO     | sum of square deviations: 17149456430.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,933 | INFO     | sum of deviations: -145111111846.00006
[2026-04-19 14:47:48] 2026-04-19 12:47:09,933 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,933 | INFO     | mean y: 2583090.1679790025
[2026-04-19 14:47:48] 2026-04-19 12:47:09,933 | INFO     | intersect: 2583090.1679790025
[2026-04-19 14:47:48] 2026-04-19 12:47:09,938 | INFO     | chi2: 2.0324659031831827
[2026-04-19 14:47:48] 2026-04-19 12:47:09,938 | INFO     | current chi2=2.0324659031831827 (change=43.73998172463686 %)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,939 | INFO     | sum of square deviations: 16483099750.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,943 | INFO     | sum of deviations: -153605137091.5
[2026-04-19 14:47:48] 2026-04-19 12:47:09,943 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,943 | INFO     | mean y: 2585025.4973404254
[2026-04-19 14:47:48] 2026-04-19 12:47:09,943 | INFO     | intersect: 2585025.4973404254
[2026-04-19 14:47:48] 2026-04-19 12:47:09,944 | INFO     | chi2: 1.9875194515499484
[2026-04-19 14:47:48] 2026-04-19 12:47:09,944 | INFO     | current chi2=1.9875194515499484 (change=2.2114246326514317 %)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,944 | INFO     | left removable region: 10
[2026-04-19 14:47:48] 2026-04-19 12:47:09,945 | INFO     | sum of square deviations: 15078347830.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,948 | INFO     | sum of deviations: -95011790739.99998
[2026-04-19 14:47:48] 2026-04-19 12:47:09,949 | INFO     | mean x (centered): 0.0
[2026-04-19 14:47:48] 2026-04-19 12:47:09,949 | INFO     | mean y: 2598703.7205479452
[2026-04-19 14:47:48] 2026-04-19 12:47:09,949 | INFO     | intersect: 2598703.7205479452
[2026-04-19 14:47:48] 2026-04-19 12:47:09,949 | INFO     | chi2: 0.17288874081178152
[2026-04-19 14:47:48] 2026-04-19 12:47:09,950 | INFO     | current memory leak: -6.30 B/s (using 365 data points, chi2=0.17)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,950 | INFO     | could have reported an average CPU frequency of 2250 MHz (17 samples)
[2026-04-19 14:47:48] 2026-04-19 12:47:09,950 | INFO     | ..............................
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . Timing measurements:
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . get job = 0 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . initial setup = 6 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . payload setup = 15 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . stage-in = 0 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . payload execution = 23493 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . stage-out = 4 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | . log creation = 1 s
[2026-04-19 14:47:48] 2026-04-19 12:47:09,951 | INFO     | ..............................
[2026-04-19 14:47:48] 2026-04-19 12:47:10,094 | INFO     | 
[2026-04-19 14:47:48] 2026-04-19 12:47:10,094 | INFO     | job summary report
[2026-04-19 14:47:48] 2026-04-19 12:47:10,094 | INFO     | --------------------------------------------------
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | PanDA job id: 7101062986
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | task id: 49820244
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | errors: (none)
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | pilot state: finished 
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | transexitcode: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | exeerrorcode: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | exeerrordiag: 
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | exitcode: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:10,095 | INFO     | exitmsg: OK
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | cpuconsumptiontime: 93964 s
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | nevents: 400
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | neventsw: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | pid: 12954
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | pgrp: 12954
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | corecount: 8
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | event service: False
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | sizes: {0: 2281605, 1: 2283434, 12: 2283434, 23512: 2318376, 23518: 2327432, 23521: 2327634}
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | --------------------------------------------------
[2026-04-19 14:47:48] 2026-04-19 12:47:10,096 | INFO     | 
[2026-04-19 14:47:48] 2026-04-19 12:47:10,097 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-19 14:47:48] 2026-04-19 12:47:10,679 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 14:47:48] 2026-04-19 12:47:10,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,682 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 14:47:48] 2026-04-19 12:47:10,682 | INFO     | job 7101062986 has completed (purged errors)
[2026-04-19 14:47:48] 2026-04-19 12:47:10,682 | INFO     | overall cleanup function is called
[2026-04-19 14:47:48] 2026-04-19 12:47:11,237 | INFO     | PID=8521 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-19 14:47:48] 2026-04-19 12:47:11,238 | INFO     | .. there are 2 such processes running
[2026-04-19 14:47:48] 2026-04-19 12:47:11,695 | INFO     | --- collectZombieJob: --- 10, [12954]
[2026-04-19 14:47:48] 2026-04-19 12:47:11,695 | INFO     | zombie collector waiting for pid 12954
[2026-04-19 14:47:48] 2026-04-19 12:47:11,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 14:47:48] 2026-04-19 12:47:11,695 | INFO     | collected zombie processes
[2026-04-19 14:47:48] 2026-04-19 12:47:11,695 | INFO     | will attempt to kill all subprocesses of pid=12954
[2026-04-19 14:47:48] 2026-04-19 12:47:11,763 | INFO     | process IDs to be killed: [12954] (in reverse order)
[2026-04-19 14:47:48] 2026-04-19 12:47:12,485 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 14:47:48] 2026-04-19 12:47:12,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 14:47:48] 2026-04-19 12:47:12,487 | INFO     | did not find any defunct processes belonging to 12954
[2026-04-19 14:47:48] 2026-04-19 12:47:12,489 | INFO     | did not find any defunct processes belonging to 12954
[2026-04-19 14:47:48] 2026-04-19 12:47:12,489 | INFO     | Ready for new job
[2026-04-19 14:47:48] 2026-04-19 12:47:12,491 | INFO     | **************************************
[2026-04-19 14:47:48] 2026-04-19 12:47:12,492 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 14:47:48] 2026-04-19 12:47:12,492 | INFO     | **************************************
[2026-04-19 14:47:48] 2026-04-19 12:47:12,492 | INFO     | 
[2026-04-19 14:47:48] 2026-04-19 12:47:12,492 | INFO     | pilot is running in a VM
[2026-04-19 14:47:48] 2026-04-19 12:47:12,492 | INFO     | architecture information:
[2026-04-19 14:47:48] 2026-04-19 12:47:12,499 | INFO     | executing command: cat /etc/os-release
[2026-04-19 14:47:48] 2026-04-19 12:47:12,797 | INFO     | cat /etc/os-release:
[2026-04-19 14:47:48] NAME="CentOS Linux"
[2026-04-19 14:47:48] VERSION="7 (Core)"
[2026-04-19 14:47:48] ID="centos"
[2026-04-19 14:47:48] ID_LIKE="rhel fedora"
[2026-04-19 14:47:48] VERSION_ID="7"
[2026-04-19 14:47:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 14:47:48] ANSI_COLOR="0;31"
[2026-04-19 14:47:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 14:47:48] HOME_URL="https://www.centos.org/"
[2026-04-19 14:47:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 14:47:48] 
[2026-04-19 14:47:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 14:47:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 14:47:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 14:47:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 14:47:48] 
[2026-04-19 14:47:48] 2026-04-19 12:47:12,797 | INFO     | **************************************
[2026-04-19 14:47:48] 2026-04-19 12:47:13,301 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-19 14:47:48] 2026-04-19 12:47:13,508 | INFO     | sufficient remaining disk space (487606714368 B)
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | INFO     | update_server=False
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 14:47:48] 2026-04-19 12:47:13,509 | INFO     | aborting loop
[2026-04-19 14:47:48] 2026-04-19 12:47:13,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 14:47:48] 2026-04-19 12:47:13,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 14:47:48] 2026-04-19 12:47:14,233 | INFO     | all data control threads have been joined
[2026-04-19 14:47:48] 2026-04-19 12:47:14,515 | INFO     | [job] retrieve thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,523 | INFO     | [job] job monitor thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,685 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,760 | INFO     | [data] copytool_in thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,776 | INFO     | all job control threads have been joined
[2026-04-19 14:47:48] 2026-04-19 12:47:14,787 | INFO     | [job] validate thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,848 | INFO     | [payload] failed_post thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:14,998 | INFO     | all payload control threads have been joined
[2026-04-19 14:47:48] 2026-04-19 12:47:15,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 14:47:48] 2026-04-19 12:47:15,239 | INFO     | [data] control thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:15,525 | INFO     | [data] copytool_out thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:15,542 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:15,782 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:15,782 | INFO     | [job] control thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:15,901 | INFO     | [payload] validate_post thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:16,004 | INFO     | [payload] control thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:16,116 | INFO     | [job] queue monitor thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:17,904 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 14:47:48] 2026-04-19 12:47:37,820 | INFO     | [monitor] cgroup control has ended
[2026-04-19 14:47:48] 2026-04-19 12:47:38,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566105675584)>', '<ExcThread(monitor, started 140565639304960)>']
[2026-04-19 14:47:48] 2026-04-19 12:47:43,348 | INFO     | PID=8521 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-19 14:47:48] 2026-04-19 12:47:43,348 | INFO     | .. there are 2 such processes running
[2026-04-19 14:47:48] 2026-04-19 12:47:43,349 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 14:47:48] 2026-04-19 12:47:43,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 14:47:48] 2026-04-19 12:47:43,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 14:47:48] 2026-04-19 12:47:43,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 14:47:48] 2026-04-19 12:47:43,350 | INFO     | [monitor] control thread has ended
[2026-04-19 14:47:48] 2026-04-19 12:47:43,438 | INFO     | all workflow threads have been joined
[2026-04-19 14:47:48] 2026-04-19 12:47:43,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 14:47:48] 2026-04-19 12:47:43,438 | INFO     | traces error code: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:43,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 14:47:48] 2026-04-19 12:47:43,741 [wrapper] ==== pilot stdout END ====
[2026-04-19 14:47:48] 2026-04-19 12:47:43,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 14:47:48] 2026-04-19 12:47:43,932 [wrapper] pilotpid: 8521
[2026-04-19 14:47:48] 2026-04-19 12:47:44,049 [wrapper] Pilot exit status: 0
[2026-04-19 14:47:48] 2026-04-19 12:47:44,502 [wrapper] pandaids: 7101062986
[2026-04-19 14:47:48] 2026-04-19 12:47:45,584 [wrapper] cleanup supervisor_pilot 27569 8522
[2026-04-19 14:47:48] 2026-04-19 12:47:45,714 [wrapper] Test setup, not cleaning
[2026-04-19 14:47:48] 2026-04-19 12:47:45,839 [wrapper] apfmon messages muted
[2026-04-19 14:47:48] 2026-04-19 12:47:45,943 [wrapper] ==== wrapper stdout END ====
[2026-04-19 14:47:48] 2026-04-19 12:47:46,046 [wrapper] ==== wrapper stderr END ====
[2026-04-19 14:47:48]  *** Error codes and diagnostics ***
[2026-04-19 14:47:48]     "exeErrorCode": 0,
[2026-04-19 14:47:48]     "pilotErrorCode": 0,
[2026-04-19 14:47:48]  *** Listing of results directory ***
[2026-04-19 14:47:48] total 2463012
[2026-04-19 14:47:48] -rwx------. 1 boinc boinc      36322 Apr 18 16:17 runpilot2-wrapper.sh
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc     644190 Apr 18 16:36 pilot3.tar.gz
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc       5094 Apr 18 16:39 queuedata.json
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc        100 Apr 19 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 14:47:48] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 08:14 run_atlas
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc        105 Apr 19 08:14 job.xml
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc       6307 Apr 19 08:14 init_data.xml
[2026-04-19 14:47:48] -rw-r--r--. 2 boinc boinc 2237375555 Apr 19 08:14 EVNT.49820242._000007.pool.root.1
[2026-04-19 14:47:48] -rw-r--r--. 2 boinc boinc      15665 Apr 19 08:14 start_atlas.sh
[2026-04-19 14:47:48] drwxrwx--x. 2 boinc boinc         68 Apr 19 08:14 shared
[2026-04-19 14:47:48] -rw-r--r--. 2 boinc boinc     656907 Apr 19 08:14 input.tar.gz
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc          0 Apr 19 08:14 boinc_lockfile
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc       2550 Apr 19 08:14 pandaJob.out
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc     997681 Apr 19 08:14 agis_schedconf.cvmfs.json
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc        413 Apr 19 08:14 workernode_map.json
[2026-04-19 14:47:48] drwx------. 5 boinc boinc       4096 Apr 19 08:14 pilot3
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc  275274262 Apr 19 14:45 HITS.49820244._001491.pool.root.1
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc        489 Apr 19 14:45 boinc_task_state.xml
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc       1021 Apr 19 14:46 memory_monitor_summary.json
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc    1512404 Apr 19 14:47 agis_ddmendpoints.agis.ALL.json
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc     564347 Apr 19 14:47 log.49820244._001491.job.log.tgz.1
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc       6335 Apr 19 14:47 heartbeat_new.json
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc       6226 Apr 19 14:47 heartbeat.json
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc       8192 Apr 19 14:47 boinc_mmap_file
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc         28 Apr 19 14:47 wrapper_checkpoint.txt
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc         95 Apr 19 14:47 pilot_heartbeat.json
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc       4879 Apr 19 14:47 pilotlog.txt
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc    2148094 Apr 19 14:47 log.49820244._001491.job.log.1
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc        357 Apr 19 14:47 output.list
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc        410 Apr 19 14:47 runtime_log
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc    2734080 Apr 19 14:47 result.tar.gz
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc       8454 Apr 19 14:47 runtime_log.err
[2026-04-19 14:47:48] -rw-------. 1 boinc boinc        656 Apr 19 14:47 926c7e918823.diag
[2026-04-19 14:47:48] -rw-r--r--. 1 boinc boinc      20646 Apr 19 14:47 stderr.txt
[2026-04-19 14:47:49] HITS file was successfully produced:
[2026-04-19 14:47:49] -rw-------. 1 boinc boinc 275274262 Apr 19 14:45 shared/HITS.pool.root.1
[2026-04-19 14:47:49]  *** Contents of shared directory: ***
[2026-04-19 14:47:49] total 2457096
[2026-04-19 14:47:49] -rw-r--r--. 2 boinc boinc 2237375555 Apr 19 08:14 ATLAS.root_0
[2026-04-19 14:47:49] -rw-r--r--. 2 boinc boinc      15665 Apr 19 08:14 start_atlas.sh
[2026-04-19 14:47:49] -rw-r--r--. 2 boinc boinc     656907 Apr 19 08:14 input.tar.gz
[2026-04-19 14:47:49] -rw-------. 1 boinc boinc  275274262 Apr 19 14:45 HITS.pool.root.1
[2026-04-19 14:47:49] -rw-------. 1 boinc boinc    2734080 Apr 19 14:47 result.tar.gz
14:47:50 (1536): run_atlas exited; CPU time 94152.101818
14:47:50 (1536): called boinc_finish(0)

</stderr_txt>
]]>

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