Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:46 (2061078): wrapper (7.7.26015): starting
00:24:46 (2061078): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 00:24:46] Arguments: --nthreads 4
[2026-04-21 00:24:46] Threads: 4
[2026-04-21 00:24:46] Checking for CVMFS
[2026-04-21 00:24:46] No cvmfs_config command found, will try listing directly
[2026-04-21 00:24:46] CVMFS is ok
[2026-04-21 00:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 00:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 00:24:46] Further information can be found at the LHC@home message board.
[2026-04-21 00:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 00:24:46] Checking for apptainer binary...
[2026-04-21 00:24:46] which: no apptainer in ((null))
[2026-04-21 00:24:46] apptainer is not installed, using version from CVMFS
[2026-04-21 00:24:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 00:24:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-21 00:24:46] apptainer works
[2026-04-21 00:24:46] Set ATHENA_PROC_NUMBER=4
[2026-04-21 00:24:46] Set ATHENA_CORE_NUMBER=4
[2026-04-21 00:24:46] Starting ATLAS job with PandaID=7088533968
[2026-04-21 00:24:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 02:41:29]  *** The last 200 lines of the pilot log: ***
[2026-04-21 02:41:29] 2026-04-21 00:40:42,000 | INFO     | monitor loop #569: job 0:7088533968 is in state 'finished'
[2026-04-21 02:41:29] 2026-04-21 00:40:42,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,459 | INFO     | job 7088533968 has state=finished
[2026-04-21 02:41:29] 2026-04-21 00:40:44,460 | INFO     | preparing for final server update for job 7088533968 in state='finished'
[2026-04-21 02:41:29] 2026-04-21 00:40:44,460 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7088533968/jobReport.json
[2026-04-21 02:41:29] 2026-04-21 00:40:44,462 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/3/workernode_map.json
[2026-04-21 02:41:29] 2026-04-21 00:40:44,463 | INFO     | this job has now completed (state=finished)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,463 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,463 | INFO     | log transfer has been attempted: DONE
[2026-04-21 02:41:29] 2026-04-21 00:40:44,463 | INFO     | job 7088533968 has finished - writing final server update
[2026-04-21 02:41:29] 2026-04-21 00:40:44,463 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8825/.job.ad'
[2026-04-21 02:41:29] 2026-04-21 00:40:44,464 | INFO     | total number of processed events: 400 (read)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,486 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7088533968/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,487 | INFO     | extracted standard info from prmon json
[2026-04-21 02:41:29] 2026-04-21 00:40:44,487 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 02:41:29] 2026-04-21 00:40:44,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 02:41:29] 2026-04-21 00:40:44,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 02:41:29] 2026-04-21 00:40:44,489 | INFO     | fitting pss+swap vs Time
[2026-04-21 02:41:29] 2026-04-21 00:40:44,490 | INFO     | sum of square deviations: 729472282.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,490 | INFO     | sum of deviations: -13532199679.000002
[2026-04-21 02:41:29] 2026-04-21 00:40:44,491 | INFO     | mean x (centered): 0.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,491 | INFO     | mean y: 2389551.69924812
[2026-04-21 02:41:29] 2026-04-21 00:40:44,491 | INFO     | intersect: 2389551.69924812
[2026-04-21 02:41:29] 2026-04-21 00:40:44,491 | INFO     | chi2: 1.3800103333863796
[2026-04-21 02:41:29] 2026-04-21 00:40:44,491 | INFO     | sum of square deviations: 650252192.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,492 | INFO     | sum of deviations: -12634039766.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,492 | INFO     | mean x (centered): 0.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,492 | INFO     | mean y: 2391281.484375
[2026-04-21 02:41:29] 2026-04-21 00:40:44,492 | INFO     | intersect: 2391281.484375
[2026-04-21 02:41:29] 2026-04-21 00:40:44,493 | INFO     | chi2: 1.3766940568539494
[2026-04-21 02:41:29] 2026-04-21 00:40:44,493 | INFO     | current chi2=1.3766940568539494 (change=0.24030809423668723 %)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,493 | INFO     | right removable region: 127
[2026-04-21 02:41:29] 2026-04-21 00:40:44,493 | INFO     | sum of square deviations: 650252192.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | sum of deviations: -26672407776.5
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | mean x (centered): 0.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | mean y: 2414102.4765625
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | intersect: 2414102.4765625
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | chi2: 0.11031231047041704
[2026-04-21 02:41:29] 2026-04-21 00:40:44,494 | INFO     | current chi2=0.11031231047041704 (change=92.006414169398 %)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,495 | INFO     | sum of square deviations: 576985702.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,495 | INFO     | sum of deviations: -20945132386.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,495 | INFO     | mean x (centered): 0.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,495 | INFO     | mean y: 2402163.8455284555
[2026-04-21 02:41:29] 2026-04-21 00:40:44,495 | INFO     | intersect: 2402163.8455284555
[2026-04-21 02:41:29] 2026-04-21 00:40:44,496 | INFO     | chi2: 0.09172634983345342
[2026-04-21 02:41:29] 2026-04-21 00:40:44,496 | INFO     | current chi2=0.09172634983345342 (change=16.848491848013555 %)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,496 | INFO     | left removable region: 10
[2026-04-21 02:41:29] 2026-04-21 00:40:44,496 | INFO     | sum of square deviations: 496597218.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,497 | INFO     | sum of deviations: -19663039571.000004
[2026-04-21 02:41:29] 2026-04-21 00:40:44,497 | INFO     | mean x (centered): 0.0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,497 | INFO     | mean y: 2405084.965811966
[2026-04-21 02:41:29] 2026-04-21 00:40:44,497 | INFO     | intersect: 2405084.965811966
[2026-04-21 02:41:29] 2026-04-21 00:40:44,497 | INFO     | chi2: 0.08517171841821565
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | current memory leak: -39.60 B/s (using 117 data points, chi2=0.09)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | could have reported an average CPU frequency of 2728 MHz (8 samples)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | ..............................
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . Timing measurements:
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . get job = 0 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . initial setup = 8 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . payload setup = 14 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . stage-in = 0 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . payload execution = 8100 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,498 | INFO     | . stage-out = 0 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,499 | INFO     | . log creation = 0 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,499 | INFO     | ..............................
[2026-04-21 02:41:29] 2026-04-21 00:40:44,585 | INFO     | 
[2026-04-21 02:41:29] 2026-04-21 00:40:44,585 | INFO     | job summary report
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | --------------------------------------------------
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | PanDA job id: 7088533968
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | task id: 49263200
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | errors: (none)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | pilot state: finished 
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | transexitcode: 0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | exeerrorcode: 0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | exeerrordiag: 
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | exitcode: 0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | exitmsg: OK
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | cpuconsumptiontime: 31150 s
[2026-04-21 02:41:29] 2026-04-21 00:40:44,586 | INFO     | nevents: 400
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | neventsw: 0
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | pid: 2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | pgrp: 2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | corecount: 4
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | event service: False
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | sizes: {0: 2280982, 1: 2283479, 12: 2283479, 8119: 2311779, 8120: 2320855, 8123: 2320993}
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | --------------------------------------------------
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | 
[2026-04-21 02:41:29] 2026-04-21 00:40:44,587 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-04-21 02:41:29] 2026-04-21 00:40:44,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 02:41:29] 2026-04-21 00:40:44,618 | INFO     | job 7088533968 has completed (purged errors)
[2026-04-21 02:41:29] 2026-04-21 00:40:44,618 | INFO     | overall cleanup function is called
[2026-04-21 02:41:29] 2026-04-21 00:40:45,626 | INFO     | --- collectZombieJob: --- 10, [2071580]
[2026-04-21 02:41:29] 2026-04-21 00:40:45,626 | INFO     | zombie collector waiting for pid 2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:45,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 02:41:29] 2026-04-21 00:40:45,626 | INFO     | collected zombie processes
[2026-04-21 02:41:29] 2026-04-21 00:40:45,626 | INFO     | will attempt to kill all subprocesses of pid=2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:46,224 | INFO     | process IDs to be killed: [2071580] (in reverse order)
[2026-04-21 02:41:29] 2026-04-21 00:40:46,456 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 02:41:29] 2026-04-21 00:40:46,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 02:41:29] 2026-04-21 00:40:46,481 | INFO     | did not find any defunct processes belonging to 2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:46,503 | INFO     | did not find any defunct processes belonging to 2071580
[2026-04-21 02:41:29] 2026-04-21 00:40:46,503 | INFO     | Ready for new job
[2026-04-21 02:41:29] 2026-04-21 00:40:46,505 | INFO     | **************************************
[2026-04-21 02:41:29] 2026-04-21 00:40:46,505 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 02:41:29] 2026-04-21 00:40:46,505 | INFO     | **************************************
[2026-04-21 02:41:29] 2026-04-21 00:40:46,505 | INFO     | 
[2026-04-21 02:41:29] 2026-04-21 00:40:46,513 | INFO     | architecture information:
[2026-04-21 02:41:29] 2026-04-21 00:40:46,513 | INFO     | executing command: cat /etc/os-release
[2026-04-21 02:41:29] 2026-04-21 00:40:46,535 | INFO     | cat /etc/os-release:
[2026-04-21 02:41:29] NAME="CentOS Linux"
[2026-04-21 02:41:29] VERSION="7 (Core)"
[2026-04-21 02:41:29] ID="centos"
[2026-04-21 02:41:29] ID_LIKE="rhel fedora"
[2026-04-21 02:41:29] VERSION_ID="7"
[2026-04-21 02:41:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 02:41:29] ANSI_COLOR="0;31"
[2026-04-21 02:41:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 02:41:29] HOME_URL="https://www.centos.org/"
[2026-04-21 02:41:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 02:41:29] 
[2026-04-21 02:41:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 02:41:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 02:41:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 02:41:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 02:41:29] 
[2026-04-21 02:41:29] 2026-04-21 00:40:46,535 | INFO     | **************************************
[2026-04-21 02:41:29] 2026-04-21 00:40:47,038 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-04-21 02:41:29] 2026-04-21 00:40:47,061 | INFO     | sufficient remaining disk space (242125635584 B)
[2026-04-21 02:41:29] 2026-04-21 00:40:47,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 02:41:29] 2026-04-21 00:40:47,061 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 02:41:29] 2026-04-21 00:40:47,062 | INFO     | update_server=False
[2026-04-21 02:41:29] 2026-04-21 00:40:47,062 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 02:41:29] 2026-04-21 00:40:47,293 | INFO     | all data control threads have been joined
[2026-04-21 02:41:29] 2026-04-21 00:40:47,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 02:41:29] 2026-04-21 00:40:47,510 | INFO     | all job control threads have been joined
[2026-04-21 02:41:29] 2026-04-21 00:40:48,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:41:29] 2026-04-21 00:40:48,028 | INFO     | aborting loop
[2026-04-21 02:41:29] 2026-04-21 00:40:48,067 | INFO     | [job] retrieve thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 02:41:29] 2026-04-21 00:40:48,090 | INFO     | [data] copytool_in thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,091 | INFO     | all payload control threads have been joined
[2026-04-21 02:41:29] 2026-04-21 00:40:48,299 | INFO     | [data] control thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,386 | INFO     | [payload] validate_post thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,517 | INFO     | [job] control thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,621 | INFO     | [job] validate thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:48,894 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,033 | INFO     | [job] job monitor thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,097 | INFO     | [payload] control thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,200 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,332 | INFO     | [payload] failed_post thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,470 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,499 | INFO     | [data] copytool_out thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:49,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:41:29] 2026-04-21 00:40:50,601 | INFO     | [job] queue monitor thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:52,094 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:40:57,463 | INFO     | job.realtimelogging is not enabled
[2026-04-21 02:41:29] 2026-04-21 00:40:58,469 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 02:41:29] 2026-04-21 00:41:17,228 | INFO     | PID=2065626 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 02:41:29] 2026-04-21 00:41:17,228 | INFO     | .. there are 9 such processes running
[2026-04-21 02:41:29] 2026-04-21 00:41:17,228 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 02:41:29] 2026-04-21 00:41:17,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 02:41:29] 2026-04-21 00:41:17,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 02:41:29] 2026-04-21 00:41:22,221 | INFO     | [monitor] cgroup control has ended
[2026-04-21 02:41:29] 2026-04-21 00:41:23,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23361190876992)>', '<ExcThread(monitor, started 23360951297792)>']
[2026-04-21 02:41:29] 2026-04-21 00:41:24,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 02:41:29] 2026-04-21 00:41:24,262 | INFO     | [monitor] control thread has ended
[2026-04-21 02:41:29] 2026-04-21 00:41:28,886 | INFO     | all workflow threads have been joined
[2026-04-21 02:41:29] 2026-04-21 00:41:28,887 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 02:41:29] 2026-04-21 00:41:28,887 | INFO     | traces error code: 0
[2026-04-21 02:41:29] 2026-04-21 00:41:28,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 02:41:29] 2026-04-21 00:41:29,013 [wrapper] ==== pilot stdout END ====
[2026-04-21 02:41:29] 2026-04-21 00:41:29,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 02:41:29] 2026-04-21 00:41:29,021 [wrapper] pilotpid: 2065626
[2026-04-21 02:41:29] 2026-04-21 00:41:29,024 [wrapper] Pilot exit status: 0
[2026-04-21 02:41:29] 2026-04-21 00:41:29,040 [wrapper] pandaids: 7088533968
[2026-04-21 02:41:29] 2026-04-21 00:41:29,208 [wrapper] cleanup supervisor_pilot 2257712 2065627
[2026-04-21 02:41:29] 2026-04-21 00:41:29,212 [wrapper] Test setup, not cleaning
[2026-04-21 02:41:29] 2026-04-21 00:41:29,217 [wrapper] apfmon messages muted
[2026-04-21 02:41:29] 2026-04-21 00:41:29,220 [wrapper] ==== wrapper stdout END ====
[2026-04-21 02:41:29] 2026-04-21 00:41:29,224 [wrapper] ==== wrapper stderr END ====
[2026-04-21 02:41:29]  *** Error codes and diagnostics ***
[2026-04-21 02:41:29]     "exeErrorCode": 0,
[2026-04-21 02:41:29]     "pilotErrorCode": 0,
[2026-04-21 02:41:29]  *** Listing of results directory ***
[2026-04-21 02:41:29] total 423132
[2026-04-21 02:41:29] -rwx------. 1 boinc boinc     36322 Apr 18 11:50 runpilot2-wrapper.sh
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc    644190 Apr 18 12:05 pilot3.tar.gz
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc      5094 Apr 18 12:05 queuedata.json
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc       100 Apr 21 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 02:41:29] -rwxr-xr-x. 1 boinc boinc      7986 Apr 21 00:24 run_atlas
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc       105 Apr 21 00:24 job.xml
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc 227018396 Apr 21 00:24 EVNT.49263198._001511.pool.root.1
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc      6539 Apr 21 00:24 init_data.xml
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:24 start_atlas.sh
[2026-04-21 02:41:29] drwxrwx--x. 2 boinc boinc      4096 Apr 21 00:24 shared
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc    656927 Apr 21 00:24 input.tar.gz
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc         0 Apr 21 00:24 boinc_lockfile
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc      2576 Apr 21 00:24 pandaJob.out
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc    997494 Apr 21 00:25 agis_schedconf.cvmfs.json
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc   1512404 Apr 21 00:25 agis_ddmendpoints.agis.ALL.json
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc       440 Apr 21 00:25 workernode_map.json
[2026-04-21 02:41:29] drwx------. 5 boinc boinc      4096 Apr 21 00:25 pilot3
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc 200090606 Apr 21 02:40 HITS.49263200._055910.pool.root.1
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc       487 Apr 21 02:40 boinc_task_state.xml
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc        95 Apr 21 02:40 pilot_heartbeat.json
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc      1028 Apr 21 02:40 memory_monitor_summary.json
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc    283707 Apr 21 02:40 log.49263200._055910.job.log.tgz.1
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc      6373 Apr 21 02:40 heartbeat_new.json
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc      6264 Apr 21 02:40 heartbeat.json
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc      8192 Apr 21 02:41 boinc_mmap_file
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc        27 Apr 21 02:41 wrapper_checkpoint.txt
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc      4900 Apr 21 02:41 pilotlog.txt
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc    771350 Apr 21 02:41 log.49263200._055910.job.log.1
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc       357 Apr 21 02:41 output.list
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc       410 Apr 21 02:41 runtime_log
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc   1075200 Apr 21 02:41 result.tar.gz
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc      8826 Apr 21 02:41 runtime_log.err
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc       662 Apr 21 02:41 53f2968be3ec.diag
[2026-04-21 02:41:29] -rw-r--r--. 1 boinc boinc     21015 Apr 21 02:41 stderr.txt
[2026-04-21 02:41:29] HITS file was successfully produced:
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc 200090606 Apr 21 02:40 shared/HITS.pool.root.1
[2026-04-21 02:41:29]  *** Contents of shared directory: ***
[2026-04-21 02:41:29] total 418824
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc 227018396 Apr 21 00:24 ATLAS.root_0
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:24 start_atlas.sh
[2026-04-21 02:41:29] -rw-r--r--. 2 boinc boinc    656927 Apr 21 00:24 input.tar.gz
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc 200090606 Apr 21 02:40 HITS.pool.root.1
[2026-04-21 02:41:29] -rw-------. 1 boinc boinc   1075200 Apr 21 02:41 result.tar.gz
02:41:30 (2061078): run_atlas exited; CPU time 31625.113810
02:41:30 (2061078): called boinc_finish(0)

</stderr_txt>
]]>

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