Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:55:13 (4129481): wrapper (7.7.26015): starting
21:55:13 (4129481): wrapper: running run_atlas (--nthreads 12)
[2026-04-19 21:55:13] Arguments: --nthreads 12
[2026-04-19 21:55:13] Threads: 12
[2026-04-19 21:55:13] Checking for CVMFS
[2026-04-19 21:55:13] No cvmfs_config command found, will try listing directly
[2026-04-19 21:55:13] CVMFS is ok
[2026-04-19 21:55:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 21:55:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 21:55:13] Further information can be found at the LHC@home message board.
[2026-04-19 21:55:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 21:55:13] Checking for apptainer binary...
[2026-04-19 21:55:13] which: no apptainer in ((null))
[2026-04-19 21:55:13] apptainer is not installed, using version from CVMFS
[2026-04-19 21:55:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 21:55:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot132/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-04-19 21:55:13] apptainer works
[2026-04-19 21:55:13] Set ATHENA_PROC_NUMBER=12
[2026-04-19 21:55:13] Set ATHENA_CORE_NUMBER=12
[2026-04-19 21:55:13] Starting ATLAS job with PandaID=7100921504
[2026-04-19 21:55:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot132/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 22:42:33]  *** The last 200 lines of the pilot log: ***
[2026-04-19 22:42:33]  filesize=344860
[2026-04-19 22:42:33]  filetype=log
[2026-04-19 22:42:33]  guid=14ca9afa-a8b5-475c-aa34-5372723fc8ea
[2026-04-19 22:42:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-19 22:42:33]  is_altstaged=None
[2026-04-19 22:42:33]  is_tar=False
[2026-04-19 22:42:33]  lfn=log.49820375._000360.job.log.tgz.1
[2026-04-19 22:42:33]  mtime=0
[2026-04-19 22:42:33]  protocol_id=None
[2026-04-19 22:42:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-19 22:42:33]  replicas=None
[2026-04-19 22:42:33]  scope=mc23_13p6TeV
[2026-04-19 22:42:33]  status=None
[2026-04-19 22:42:33]  status_code=0
[2026-04-19 22:42:33]  storage_token=
[2026-04-19 22:42:33]  surl=/var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7100921504/log.49820375._000360.job.log.tgz.1
[2026-04-19 22:42:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/69/log.49820375._000360.job.log.tgz.1
[2026-04-19 22:42:33]  workdir=None
[2026-04-19 22:42:33] ]
[2026-04-19 22:42:33] 2026-04-19 20:41:26,200 | INFO     | transferring file log.49820375._000360.job.log.tgz.1 from /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7100921504/log.49820375._000360.job.log.tgz.1 to /var/lib/
[2026-04-19 22:42:33] 2026-04-19 20:41:26,201 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7100921504/log.49820375._000360.job.log.tgz.1 /var/lib/boinc/var/slot132/slots/1/
[2026-04-19 22:42:33] 2026-04-19 20:41:26,215 | INFO     | adding to output.list: log.49820375._000360.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/69/log.49820375._000360.job.log.tg
[2026-04-19 22:42:33] 2026-04-19 20:41:26,215 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-19 22:42:33] 2026-04-19 20:41:26,215 | INFO     | summary of transferred files:
[2026-04-19 22:42:33] 2026-04-19 20:41:26,217 | INFO     |  -- lfn=log.49820375._000360.job.log.tgz.1, status_code=0, status=transferred
[2026-04-19 22:42:33] 2026-04-19 20:41:26,218 | INFO     | stage-out finished correctly
[2026-04-19 22:42:33] 2026-04-19 20:41:26,263 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-19 22:42:33] 2026-04-19 20:41:26,391 | INFO     | number of running child processes to parent process 4148820: 1
[2026-04-19 22:42:33] 2026-04-19 20:41:26,391 | INFO     | maximum number of monitored processes: 6
[2026-04-19 22:42:33] 2026-04-19 20:41:28,894 | INFO     | monitor loop #207: job 0:7100921504 is in state 'finished'
[2026-04-19 22:42:33] 2026-04-19 20:41:28,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,133 | INFO     | job 7100921504 has state=finished
[2026-04-19 22:42:33] 2026-04-19 20:41:29,133 | INFO     | preparing for final server update for job 7100921504 in state='finished'
[2026-04-19 22:42:33] 2026-04-19 20:41:29,134 | INFO     | reading metadata from: /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7100921504/jobReport.json
[2026-04-19 22:42:33] 2026-04-19 20:41:29,135 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot132/slots/1/workernode_map.json
[2026-04-19 22:42:33] 2026-04-19 20:41:29,135 | INFO     | this job has now completed (state=finished)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,135 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,135 | INFO     | log transfer has been attempted: DONE
[2026-04-19 22:42:33] 2026-04-19 20:41:29,135 | INFO     | job 7100921504 has finished - writing final server update
[2026-04-19 22:42:33] 2026-04-19 20:41:29,136 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8450/.job.ad'
[2026-04-19 22:42:33] 2026-04-19 20:41:29,136 | INFO     | total number of processed events: 400 (read)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,152 | INFO     | using path: /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7100921504/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,153 | INFO     | extracted standard info from prmon json
[2026-04-19 22:42:33] 2026-04-19 20:41:29,153 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 22:42:33] 2026-04-19 20:41:29,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 22:42:33] 2026-04-19 20:41:29,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | fitting pss+swap vs Time
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | sum of square deviations: 17003109.5
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | sum of deviations: 48302270.5
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | mean x (centered): 0.0
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | mean y: 2780487.552631579
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | intersect: 2780487.552631579
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | chi2: 0.0005231335785791261
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | current memory leak: 2.84 B/s (using 38 data points, chi2=0.00)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | could have reported an average CPU frequency of 3650 MHz (5 samples)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | ..............................
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . Timing measurements:
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . get job = 0 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . initial setup = 4 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . payload setup = 5 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . stage-in = 0 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . payload execution = 2742 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . stage-out = 0 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | . log creation = 0 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,154 | INFO     | ..............................
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | 
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | job summary report
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | --------------------------------------------------
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | PanDA job id: 7100921504
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | task id: 49820375
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | errors: (none)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | pilot state: finished 
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | transexitcode: 0
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | exeerrorcode: 0
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | exeerrordiag: 
[2026-04-19 22:42:33] 2026-04-19 20:41:29,636 | INFO     | exitcode: 0
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | exitmsg: OK
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | cpuconsumptiontime: 29613 s
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | nevents: 400
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | neventsw: 0
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | pid: 4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | pgrp: 4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | corecount: 12
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | event service: False
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | sizes: {0: 2283445, 11: 2283445, 2751: 2308791, 2752: 2317869, 2755: 2318039}
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | --------------------------------------------------
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | 
[2026-04-19 22:42:33] 2026-04-19 20:41:29,637 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot132/slots/1
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | job 7100921504 has completed (purged errors)
[2026-04-19 22:42:33] 2026-04-19 20:41:29,655 | INFO     | overall cleanup function is called
[2026-04-19 22:42:33] 2026-04-19 20:41:30,662 | INFO     | --- collectZombieJob: --- 10, [4148820]
[2026-04-19 22:42:33] 2026-04-19 20:41:30,662 | INFO     | zombie collector waiting for pid 4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:30,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 22:42:33] 2026-04-19 20:41:30,662 | INFO     | collected zombie processes
[2026-04-19 22:42:33] 2026-04-19 20:41:30,662 | INFO     | will attempt to kill all subprocesses of pid=4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:30,991 | INFO     | process IDs to be killed: [4148820] (in reverse order)
[2026-04-19 22:42:33] 2026-04-19 20:41:31,128 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 22:42:33] 2026-04-19 20:41:31,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 22:42:33] 2026-04-19 20:41:31,149 | INFO     | did not find any defunct processes belonging to 4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:31,170 | INFO     | did not find any defunct processes belonging to 4148820
[2026-04-19 22:42:33] 2026-04-19 20:41:31,170 | INFO     | Ready for new job
[2026-04-19 22:42:33] 2026-04-19 20:41:31,171 | INFO     | **************************************
[2026-04-19 22:42:33] 2026-04-19 20:41:31,171 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 22:42:33] 2026-04-19 20:41:31,171 | INFO     | **************************************
[2026-04-19 22:42:33] 2026-04-19 20:41:31,171 | INFO     | 
[2026-04-19 22:42:33] 2026-04-19 20:41:31,177 | INFO     | architecture information:
[2026-04-19 22:42:33] 2026-04-19 20:41:31,177 | INFO     | executing command: cat /etc/os-release
[2026-04-19 22:42:33] 2026-04-19 20:41:31,189 | INFO     | cat /etc/os-release:
[2026-04-19 22:42:33] NAME="CentOS Linux"
[2026-04-19 22:42:33] VERSION="7 (Core)"
[2026-04-19 22:42:33] ID="centos"
[2026-04-19 22:42:33] ID_LIKE="rhel fedora"
[2026-04-19 22:42:33] VERSION_ID="7"
[2026-04-19 22:42:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 22:42:33] ANSI_COLOR="0;31"
[2026-04-19 22:42:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 22:42:33] HOME_URL="https://www.centos.org/"
[2026-04-19 22:42:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 22:42:33] 
[2026-04-19 22:42:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 22:42:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 22:42:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 22:42:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 22:42:33] 
[2026-04-19 22:42:33] 2026-04-19 20:41:31,190 | INFO     | **************************************
[2026-04-19 22:42:33] 2026-04-19 20:41:31,692 | INFO     | executing command: df -mP /var/lib/boinc/var/slot132/slots/1
[2026-04-19 22:42:33] 2026-04-19 20:41:31,706 | INFO     | sufficient remaining disk space (202675060736 B)
[2026-04-19 22:42:33] 2026-04-19 20:41:31,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 22:42:33] 2026-04-19 20:41:31,706 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 22:42:33] 2026-04-19 20:41:31,707 | INFO     | update_server=False
[2026-04-19 22:42:33] 2026-04-19 20:41:31,707 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 22:42:33] 2026-04-19 20:41:31,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 22:42:33] 2026-04-19 20:41:32,064 | INFO     | all job control threads have been joined
[2026-04-19 22:42:33] 2026-04-19 20:41:32,158 | INFO     | all data control threads have been joined
[2026-04-19 22:42:33] 2026-04-19 20:41:32,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 22:42:33] 2026-04-19 20:41:32,324 | INFO     | all payload control threads have been joined
[2026-04-19 22:42:33] 2026-04-19 20:41:32,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:42:33] 2026-04-19 20:41:32,400 | INFO     | aborting loop
[2026-04-19 22:42:33] 2026-04-19 20:41:32,712 | INFO     | [job] retrieve thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:32,846 | INFO     | [payload] validate_post thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,070 | INFO     | [job] control thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,163 | INFO     | [data] control thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,330 | INFO     | [payload] control thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,405 | INFO     | [job] job monitor thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,702 | INFO     | [job] validate thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,764 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,778 | INFO     | [data] copytool_out thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,780 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,853 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:33,882 | INFO     | [payload] failed_post thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:34,144 | INFO     | [data] copytool_in thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:34,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:42:33] 2026-04-19 20:41:35,217 | INFO     | [job] queue monitor thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:36,322 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:41:41,862 | INFO     | job.realtimelogging is not enabled
[2026-04-19 22:42:33] 2026-04-19 20:41:42,867 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 22:42:33] 2026-04-19 20:42:02,804 | INFO     | PID=4134411 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 22:42:33] 2026-04-19 20:42:02,804 | INFO     | .. there are 11 such processes running
[2026-04-19 22:42:33] 2026-04-19 20:42:02,804 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 22:42:33] 2026-04-19 20:42:02,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 22:42:33] 2026-04-19 20:42:02,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 22:42:33] 2026-04-19 20:42:26,877 | INFO     | [monitor] cgroup control has ended
[2026-04-19 22:42:33] 2026-04-19 20:42:28,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23182857070400)>', '<ExcThread(monitor, started 23182549436160)>']
[2026-04-19 22:42:33] 2026-04-19 20:42:28,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 22:42:33] 2026-04-19 20:42:28,924 | INFO     | [monitor] control thread has ended
[2026-04-19 22:42:33] 2026-04-19 20:42:33,062 | INFO     | all workflow threads have been joined
[2026-04-19 22:42:33] 2026-04-19 20:42:33,062 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 22:42:33] 2026-04-19 20:42:33,062 | INFO     | traces error code: 0
[2026-04-19 22:42:33] 2026-04-19 20:42:33,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 22:42:33] 2026-04-19 20:42:33,182 [wrapper] ==== pilot stdout END ====
[2026-04-19 22:42:33] 2026-04-19 20:42:33,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 22:42:33] 2026-04-19 20:42:33,185 [wrapper] pilotpid: 4134411
[2026-04-19 22:42:33] 2026-04-19 20:42:33,186 [wrapper] Pilot exit status: 0
[2026-04-19 22:42:33] 2026-04-19 20:42:33,193 [wrapper] pandaids: 7100921504
[2026-04-19 22:42:33] 2026-04-19 20:42:33,286 [wrapper] cleanup supervisor_pilot  168250 4134412
[2026-04-19 22:42:33] 2026-04-19 20:42:33,287 [wrapper] Test setup, not cleaning
[2026-04-19 22:42:33] 2026-04-19 20:42:33,289 [wrapper] apfmon messages muted
[2026-04-19 22:42:33] 2026-04-19 20:42:33,290 [wrapper] ==== wrapper stdout END ====
[2026-04-19 22:42:33] 2026-04-19 20:42:33,291 [wrapper] ==== wrapper stderr END ====
[2026-04-19 22:42:33]  *** Error codes and diagnostics ***
[2026-04-19 22:42:33]     "exeErrorCode": 0,
[2026-04-19 22:42:33]     "pilotErrorCode": 0,
[2026-04-19 22:42:33]  *** Listing of results directory ***
[2026-04-19 22:42:33] total 2472756
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc     644190 Apr 18 12:46 pilot3.tar.gz
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc       5094 Apr 18 13:16 queuedata.json
[2026-04-19 22:42:33] -rwx------. 1 boinc boinc      36322 Apr 18 13:16 runpilot2-wrapper.sh
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc        100 Apr 19 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 22:42:33] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 21:55 run_atlas
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc        105 Apr 19 21:55 job.xml
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc      15665 Apr 19 21:55 start_atlas.sh
[2026-04-19 22:42:33] drwxrwx--x. 2 boinc boinc       4096 Apr 19 21:55 shared
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc     656911 Apr 19 21:55 input.tar.gz
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc       6626 Apr 19 21:55 init_data.xml
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc 2247161286 Apr 19 21:55 EVNT.49820373._000007.pool.root.1
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc          0 Apr 19 21:55 boinc_lockfile
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc       2581 Apr 19 21:55 pandaJob.out
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc     997737 Apr 19 21:55 agis_schedconf.cvmfs.json
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc    1512404 Apr 19 21:55 agis_ddmendpoints.agis.ALL.json
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc        443 Apr 19 21:55 workernode_map.json
[2026-04-19 22:42:33] drwx------. 5 boinc boinc       4096 Apr 19 21:55 pilot3
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc  279581103 Apr 19 22:40 HITS.49820375._000360.pool.root.1
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc        488 Apr 19 22:41 boinc_task_state.xml
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc       1031 Apr 19 22:41 memory_monitor_summary.json
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc         95 Apr 19 22:41 pilot_heartbeat.json
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc     344860 Apr 19 22:41 log.49820375._000360.job.log.tgz.1
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc       6371 Apr 19 22:41 heartbeat_new.json
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc       6262 Apr 19 22:41 heartbeat.json
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc       8192 Apr 19 22:42 boinc_mmap_file
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc         27 Apr 19 22:42 wrapper_checkpoint.txt
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc       4902 Apr 19 22:42 pilotlog.txt
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc     300479 Apr 19 22:42 log.49820375._000360.job.log.1
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc        357 Apr 19 22:42 output.list
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc        410 Apr 19 22:42 runtime_log
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc     665600 Apr 19 22:42 result.tar.gz
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc       8845 Apr 19 22:42 runtime_log.err
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc        662 Apr 19 22:42 681c3702667c.diag
[2026-04-19 22:42:33] -rw-r--r--. 1 boinc boinc      20961 Apr 19 22:42 stderr.txt
[2026-04-19 22:42:33] HITS file was successfully produced:
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc 279581103 Apr 19 22:40 shared/HITS.pool.root.1
[2026-04-19 22:42:33]  *** Contents of shared directory: ***
[2026-04-19 22:42:33] total 2468848
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc      15665 Apr 19 21:55 start_atlas.sh
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc     656911 Apr 19 21:55 input.tar.gz
[2026-04-19 22:42:33] -rw-r--r--. 2 boinc boinc 2247161286 Apr 19 21:55 ATLAS.root_0
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc  279581103 Apr 19 22:40 HITS.pool.root.1
[2026-04-19 22:42:33] -rw-------. 1 boinc boinc     665600 Apr 19 22:42 result.tar.gz
22:42:34 (4129481): run_atlas exited; CPU time 29703.717592
22:42:34 (4129481): called boinc_finish(0)

</stderr_txt>
]]>

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