Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:46:26 (751904): wrapper (7.7.26015): starting
00:46:26 (751904): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 00:46:26] Arguments: --nthreads 4
[2026-04-20 00:46:26] Threads: 4
[2026-04-20 00:46:26] Checking for CVMFS
[2026-04-20 00:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-20 00:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-20 00:46:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-20 00:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-20 00:46:30] 2.13.2.0 13030 2572 47276 158488 3 188 3675065 4194304 922 130560 0 3025905 99.999 3271 7 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-04-20 00:46:30] CVMFS is ok
[2026-04-20 00:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 00:46:30] Checking for apptainer binary...
[2026-04-20 00:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-20 00:46:30] Running /usr/bin/apptainer --version
[2026-04-20 00:46:30] apptainer version 1.4.0
[2026-04-20 00:46:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 00:46:30] rubble
[2026-04-20 00:46:30] apptainer works
[2026-04-20 00:46:30] Set ATHENA_PROC_NUMBER=4
[2026-04-20 00:46:30] Set ATHENA_CORE_NUMBER=4
[2026-04-20 00:46:30] Starting ATLAS job with PandaID=7101147113
[2026-04-20 00:46:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 03:27:17]  *** The last 200 lines of the pilot log: ***
[2026-04-20 03:27:17] 2026-04-20 03:26:36,816 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-20 03:27:17] 2026-04-20 03:26:36,835 | INFO     | monitor loop #724: job 0:7101147113 is in state 'finished'
[2026-04-20 03:27:17] 2026-04-20 03:26:36,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,077 | INFO     | job 7101147113 has state=finished
[2026-04-20 03:27:17] 2026-04-20 03:26:39,077 | INFO     | preparing for final server update for job 7101147113 in state='finished'
[2026-04-20 03:27:17] 2026-04-20 03:26:39,077 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7101147113/jobReport.json
[2026-04-20 03:27:17] 2026-04-20 03:26:39,078 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-04-20 03:27:17] 2026-04-20 03:26:39,079 | INFO     | this job has now completed (state=finished)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,079 | INFO     | log transfer has been attempted: DONE
[2026-04-20 03:27:17] 2026-04-20 03:26:39,079 | INFO     | job 7101147113 has finished - writing final server update
[2026-04-20 03:27:17] 2026-04-20 03:26:39,079 | INFO     | total number of processed events: 400 (read)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,080 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7101147113/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,080 | INFO     | extracted standard info from prmon json
[2026-04-20 03:27:17] 2026-04-20 03:26:39,080 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 03:27:17] 2026-04-20 03:26:39,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 03:27:17] 2026-04-20 03:26:39,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | fitting pss+swap vs Time
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | sum of square deviations: 1199940638.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | sum of deviations: 33000697257.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | mean x (centered): 0.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | mean y: 2549343.025477707
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | intersect: 2549343.025477707
[2026-04-20 03:27:17] 2026-04-20 03:26:39,082 | INFO     | chi2: 1.8664721034596088
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | sum of square deviations: 1088905998.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | sum of deviations: 31888893872.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | mean x (centered): 0.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | mean y: 2547815.5657894737
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | intersect: 2547815.5657894737
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | chi2: 1.8678989058350166
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | current chi2=1.8678989058350166 (change=-0.07644380930007816 %)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | right removable region: 151
[2026-04-20 03:27:17] 2026-04-20 03:26:39,083 | INFO     | sum of square deviations: 1088905998.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | sum of deviations: 2050926780.5000005
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | mean x (centered): 0.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | mean y: 2591396.664473684
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | intersect: 2591396.664473684
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | chi2: 0.02670200508242863
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | current chi2=0.02670200508242863 (change=98.56938632873563 %)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | sum of square deviations: 984941258.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | sum of deviations: 470074173.9999997
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | mean x (centered): 0.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | mean y: 2593704.68707483
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | intersect: 2593704.68707483
[2026-04-20 03:27:17] 2026-04-20 03:26:39,084 | INFO     | chi2: 0.023294245378249732
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | current chi2=0.023294245378249732 (change=12.762186561118549 %)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | left removable region: 10
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | sum of square deviations: 869188390.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | sum of deviations: 414166088.0000001
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | mean x (centered): 0.0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | mean y: 2593616.304964539
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | intersect: 2593616.304964539
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | chi2: 0.023294211833420866
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | current memory leak: 0.48 B/s (using 141 data points, chi2=0.02)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | could have reported an average CPU frequency of 3514 MHz (9 samples)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | ..............................
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | . Timing measurements:
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | . get job = 0 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | . initial setup = 10 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,085 | INFO     | . payload setup = 4 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,086 | INFO     | . stage-in = 0 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,086 | INFO     | . payload execution = 9558 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,086 | INFO     | . stage-out = 0 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,086 | INFO     | . log creation = 0 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,086 | INFO     | ..............................
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | 
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | job summary report
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | --------------------------------------------------
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | PanDA job id: 7101147113
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | task id: 49820375
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | errors: (none)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | pilot state: finished 
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | transexitcode: 0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | exeerrorcode: 0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | exeerrordiag: 
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | exitcode: 0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | exitmsg: OK
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | cpuconsumptiontime: 36752 s
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | nevents: 400
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | neventsw: 0
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | pid: 760428
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | pgrp: 760428
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | corecount: 4
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | event service: False
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | sizes: {0: 2283446, 10: 2283446, 9566: 2312078, 9567: 2321090, 9569: 2321146, 9572: 2321404}
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | --------------------------------------------------
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | 
[2026-04-20 03:27:17] 2026-04-20 03:26:39,124 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-04-20 03:27:17] 2026-04-20 03:26:39,137 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,137 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,137 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,137 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | job 7101147113 has completed (purged errors)
[2026-04-20 03:27:17] 2026-04-20 03:26:39,138 | INFO     | overall cleanup function is called
[2026-04-20 03:27:17] 2026-04-20 03:26:40,146 | INFO     | --- collectZombieJob: --- 10, [760428]
[2026-04-20 03:27:17] 2026-04-20 03:26:40,146 | INFO     | zombie collector waiting for pid 760428
[2026-04-20 03:27:17] 2026-04-20 03:26:40,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 03:27:17] 2026-04-20 03:26:40,146 | INFO     | collected zombie processes
[2026-04-20 03:27:17] 2026-04-20 03:26:40,146 | INFO     | will attempt to kill all subprocesses of pid=760428
[2026-04-20 03:27:17] 2026-04-20 03:26:40,178 | INFO     | process IDs to be killed: [760428] (in reverse order)
[2026-04-20 03:27:17] 2026-04-20 03:26:40,200 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 03:27:17] 2026-04-20 03:26:40,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 03:27:17] 2026-04-20 03:26:40,201 | INFO     | did not find any defunct processes belonging to 760428
[2026-04-20 03:27:17] 2026-04-20 03:26:40,202 | INFO     | did not find any defunct processes belonging to 760428
[2026-04-20 03:27:17] 2026-04-20 03:26:40,202 | INFO     | Ready for new job
[2026-04-20 03:27:17] 2026-04-20 03:26:40,203 | INFO     | **************************************
[2026-04-20 03:27:17] 2026-04-20 03:26:40,203 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 03:27:17] 2026-04-20 03:26:40,203 | INFO     | **************************************
[2026-04-20 03:27:17] 2026-04-20 03:26:40,203 | INFO     | 
[2026-04-20 03:27:17] 2026-04-20 03:26:40,204 | INFO     | architecture information:
[2026-04-20 03:27:17] 2026-04-20 03:26:40,204 | INFO     | executing command: cat /etc/os-release
[2026-04-20 03:27:17] 2026-04-20 03:26:40,213 | INFO     | cat /etc/os-release:
[2026-04-20 03:27:17] NAME="CentOS Linux"
[2026-04-20 03:27:17] VERSION="7 (Core)"
[2026-04-20 03:27:17] ID="centos"
[2026-04-20 03:27:17] ID_LIKE="rhel fedora"
[2026-04-20 03:27:17] VERSION_ID="7"
[2026-04-20 03:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 03:27:17] ANSI_COLOR="0;31"
[2026-04-20 03:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 03:27:17] HOME_URL="https://www.centos.org/"
[2026-04-20 03:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 03:27:17] 
[2026-04-20 03:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 03:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 03:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 03:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 03:27:17] 
[2026-04-20 03:27:17] 2026-04-20 03:26:40,214 | INFO     | **************************************
[2026-04-20 03:27:17] 2026-04-20 03:26:40,717 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-04-20 03:27:17] 2026-04-20 03:26:40,727 | INFO     | sufficient remaining disk space (253125197824 B)
[2026-04-20 03:27:17] 2026-04-20 03:26:40,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | INFO     | update_server=False
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 03:27:17] 2026-04-20 03:26:40,728 | INFO     | aborting loop
[2026-04-20 03:27:17] 2026-04-20 03:26:40,973 | INFO     | all data control threads have been joined
[2026-04-20 03:27:17] 2026-04-20 03:26:41,577 | INFO     | all job control threads have been joined
[2026-04-20 03:27:17] 2026-04-20 03:26:41,622 | INFO     | all payload control threads have been joined
[2026-04-20 03:27:17] 2026-04-20 03:26:41,733 | INFO     | [job] queue monitor thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:41,733 | INFO     | [job] retrieve thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:41,733 | INFO     | [job] job monitor thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:41,978 | INFO     | [data] control thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,026 | INFO     | [payload] failed_post thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,518 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,582 | INFO     | [job] control thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,627 | INFO     | [payload] control thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,698 | INFO     | [job] validate thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,734 | INFO     | [data] copytool_out thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:42,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 03:27:17] 2026-04-20 03:26:42,929 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:43,058 | INFO     | [payload] validate_post thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:43,084 | INFO     | [data] copytool_in thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:43,113 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:46,866 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:26:50,867 | INFO     | job.realtimelogging is not enabled
[2026-04-20 03:27:17] 2026-04-20 03:26:51,872 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 03:27:17] 2026-04-20 03:27:10,485 | INFO     | PID=755994 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-20 03:27:17] 2026-04-20 03:27:10,485 | INFO     | .. there are 2 such processes running
[2026-04-20 03:27:17] 2026-04-20 03:27:10,485 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 03:27:17] 2026-04-20 03:27:10,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 03:27:17] 2026-04-20 03:27:10,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 03:27:17] 2026-04-20 03:27:10,855 | INFO     | [monitor] cgroup control has ended
[2026-04-20 03:27:17] 2026-04-20 03:27:12,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129413955045184)>', '<ExcThread(monitor, started 129413337315072)>']
[2026-04-20 03:27:17] 2026-04-20 03:27:13,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 03:27:17] 2026-04-20 03:27:13,499 | INFO     | [monitor] control thread has ended
[2026-04-20 03:27:17] 2026-04-20 03:27:17,687 | INFO     | all workflow threads have been joined
[2026-04-20 03:27:17] 2026-04-20 03:27:17,687 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 03:27:17] 2026-04-20 03:27:17,687 | INFO     | traces error code: 0
[2026-04-20 03:27:17] 2026-04-20 03:27:17,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 03:27:17] 2026-04-20 03:27:17,740 [wrapper] ==== pilot stdout END ====
[2026-04-20 03:27:17] 2026-04-20 03:27:17,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 03:27:17] 2026-04-20 03:27:17,743 [wrapper] pilotpid: 755994
[2026-04-20 03:27:17] 2026-04-20 03:27:17,744 [wrapper] Pilot exit status: 0
[2026-04-20 03:27:17] 2026-04-20 03:27:17,749 [wrapper] pandaids: 7101147113
[2026-04-20 03:27:17] 2026-04-20 03:27:17,763 [wrapper] cleanup supervisor_pilot  779452 755995
[2026-04-20 03:27:17] 2026-04-20 03:27:17,765 [wrapper] Test setup, not cleaning
[2026-04-20 03:27:17] 2026-04-20 03:27:17,766 [wrapper] apfmon messages muted
[2026-04-20 03:27:17] 2026-04-20 03:27:17,767 [wrapper] ==== wrapper stdout END ====
[2026-04-20 03:27:17] 2026-04-20 03:27:17,769 [wrapper] ==== wrapper stderr END ====
[2026-04-20 03:27:17]  *** Error codes and diagnostics ***
[2026-04-20 03:27:17]     "exeErrorCode": 0,
[2026-04-20 03:27:17]     "pilotErrorCode": 0,
[2026-04-20 03:27:17]  *** Listing of results directory ***
[2026-04-20 03:27:17] total 2452920
[2026-04-20 03:27:17] -rwx------ 1 boinc boinc      36322 Apr 18 14:18 runpilot2-wrapper.sh
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc     644190 Apr 18 14:36 pilot3.tar.gz
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc       5094 Apr 18 14:39 queuedata.json
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc        100 Apr 20 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 03:27:17] -rwxr-xr-x 1 boinc boinc       7986 Apr 20 00:45 run_atlas
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc        105 Apr 20 00:45 job.xml
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc 2228140184 Apr 20 00:46 EVNT.49820373._000016.pool.root.1
[2026-04-20 03:27:17] drwxrwx--x 2 boinc boinc       4096 Apr 20 00:46 shared
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc     656918 Apr 20 00:46 input.tar.gz
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc      15665 Apr 20 00:46 start_atlas.sh
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc          0 Apr 20 00:46 boinc_setup_complete
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc       9657 Apr 20 00:46 init_data.xml
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc          0 Apr 20 00:46 boinc_lockfile
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc       2584 Apr 20 00:46 pandaJob.out
[2026-04-20 03:27:17] -rw------- 1 boinc boinc         50 Apr 20 00:46 setup.sh.local
[2026-04-20 03:27:17] -rw------- 1 boinc boinc     997908 Apr 20 00:46 agis_schedconf.cvmfs.json
[2026-04-20 03:27:17] -rw------- 1 boinc boinc    1512404 Apr 20 00:46 agis_ddmendpoints.agis.ALL.json
[2026-04-20 03:27:17] -rw------- 1 boinc boinc        417 Apr 20 00:46 workernode_map.json
[2026-04-20 03:27:17] drwx------ 5 boinc boinc       4096 Apr 20 00:46 pilot3
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc        488 Apr 20 03:26 boinc_task_state.xml
[2026-04-20 03:27:17] -rw------- 1 boinc boinc  276874385 Apr 20 03:26 HITS.49820375._002763.pool.root.1
[2026-04-20 03:27:17] -rw------- 1 boinc boinc       1022 Apr 20 03:26 memory_monitor_summary.json
[2026-04-20 03:27:17] -rw------- 1 boinc boinc     431463 Apr 20 03:26 log.49820375._002763.job.log.tgz.1
[2026-04-20 03:27:17] -rw------- 1 boinc boinc       6292 Apr 20 03:26 heartbeat_new.json
[2026-04-20 03:27:17] -rw------- 1 boinc boinc       6183 Apr 20 03:26 heartbeat.json
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc       8192 Apr 20 03:26 boinc_mmap_file
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc         27 Apr 20 03:26 wrapper_checkpoint.txt
[2026-04-20 03:27:17] -rw------- 1 boinc boinc         95 Apr 20 03:27 pilot_heartbeat.json
[2026-04-20 03:27:17] -rw------- 1 boinc boinc       4897 Apr 20 03:27 pilotlog.txt
[2026-04-20 03:27:17] -rw------- 1 boinc boinc     920609 Apr 20 03:27 log.49820375._002763.job.log.1
[2026-04-20 03:27:17] -rw------- 1 boinc boinc        357 Apr 20 03:27 output.list
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc        410 Apr 20 03:27 runtime_log
[2026-04-20 03:27:17] -rw------- 1 boinc boinc    1372160 Apr 20 03:27 result.tar.gz
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc       9009 Apr 20 03:27 runtime_log.err
[2026-04-20 03:27:17] -rw------- 1 boinc boinc        646 Apr 20 03:27 92d1b1bb48b0.diag
[2026-04-20 03:27:17] -rw-r--r-- 1 boinc boinc      20889 Apr 20 03:27 stderr.txt
[2026-04-20 03:27:17] HITS file was successfully produced:
[2026-04-20 03:27:17] -rw------- 1 boinc boinc 276874385 Apr 20 03:26 shared/HITS.pool.root.1
[2026-04-20 03:27:17]  *** Contents of shared directory: ***
[2026-04-20 03:27:17] total 2448316
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc 2228140184 Apr 20 00:46 ATLAS.root_0
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc     656918 Apr 20 00:46 input.tar.gz
[2026-04-20 03:27:17] -rw-r--r-- 2 boinc boinc      15665 Apr 20 00:46 start_atlas.sh
[2026-04-20 03:27:17] -rw------- 1 boinc boinc  276874385 Apr 20 03:26 HITS.pool.root.1
[2026-04-20 03:27:17] -rw------- 1 boinc boinc    1372160 Apr 20 03:27 result.tar.gz
03:27:19 (751904): run_atlas exited; CPU time 36787.870715
03:27:19 (751904): called boinc_finish(0)

</stderr_txt>
]]>

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