Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-19 03:13:05 (1068): vboxwrapper version 26210
2026-04-19 03:13:05 (1068): BOINC client version: 8.2.8
2026-04-19 03:13:06 (1068): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-04-19 03:13:06 (1068): Successfully copied 'init_data.xml' to the shared directory.
2026-04-19 03:13:06 (1068): Create VM. (boinc_54243106f855eb93, slot#2)
2026-04-19 03:13:07 (1068): Setting Memory Size for VM. (4200MB)
2026-04-19 03:13:07 (1068): Setting CPU Count for VM. (2)
2026-04-19 03:13:07 (1068): Setting Chipset Options for VM.
2026-04-19 03:13:08 (1068): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-19 03:13:08 (1068): Setting Boot Options for VM.
2026-04-19 03:13:08 (1068): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-19 03:13:09 (1068): Enabling VM Network Access.
2026-04-19 03:13:09 (1068): Disabling USB Support for VM.
2026-04-19 03:13:09 (1068): Disabling COM Port Support for VM.
2026-04-19 03:13:09 (1068): Disabling LPT Port Support for VM.
2026-04-19 03:13:10 (1068): Disabling Audio Support for VM.
2026-04-19 03:13:10 (1068): Disabling Clipboard Support for VM.
2026-04-19 03:13:10 (1068): Disabling Drag and Drop Support for VM.
2026-04-19 03:13:11 (1068): Adding storage controller(s) to VM.
2026-04-19 03:13:11 (1068): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-19 03:13:12 (1068): Adding VirtualBox Guest Additions to VM.
2026-04-19 03:13:12 (1068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-19 03:13:12 (1068): forwarding host port 56929 to guest port 80
2026-04-19 03:13:13 (1068): Enabling remote desktop for VM.
2026-04-19 03:13:13 (1068): Required extension pack not installed, remote desktop not enabled.
2026-04-19 03:13:13 (1068): Enabling shared directory for VM.
2026-04-19 03:13:13 (1068): Starting VM using VBoxManage interface. (boinc_54243106f855eb93, slot#2)
2026-04-19 03:13:20 (1068): Successfully started VM. (PID = '9200')
2026-04-19 03:13:20 (1068): Reporting VM Process ID to BOINC.
2026-04-19 03:13:20 (1068): Guest Log: BIOS: VirtualBox 7.0.6
2026-04-19 03:13:20 (1068): Guest Log: CPUID EDX: 0x178bfbff
2026-04-19 03:13:20 (1068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-19 03:13:20 (1068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-19 03:13:20 (1068): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-19 03:13:20 (1068): Detected: Web Application Enabled (http://localhost:56929)
2026-04-19 03:13:20 (1068): Preference change detected
2026-04-19 03:13:20 (1068): Setting CPU throttle for VM. (100%)
2026-04-19 03:13:20 (1068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-19 03:13:22 (1068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-19 03:13:22 (1068): Guest Log: BIOS: Booting from Hard Disk...
2026-04-19 03:13:25 (1068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-19 03:13:25 (1068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-19 03:13:25 (1068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-19 03:13:31 (1068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-19 03:13:31 (1068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-19 03:13:41 (1068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000170 main     Log opened 2026-04-19T03:13:39.380598000Z
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000280 main     OS Product: Linux
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000322 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000354 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000386 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000387 main     Process ID: 1262
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.000388 main     Package type: LINUX_64BITS_GENERIC
2026-04-19 03:13:41 (1068): Guest Log: 00:00:00.002725 main     5.2.32 r132073 started. Verbose level = 0
2026-04-19 03:13:41 (1068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-19 03:13:41 (1068): Guest Log: [INFO] Mounting shared directory
2026-04-19 03:13:41 (1068): Guest Log: [INFO] Checking for init_data.xml
2026-04-19 03:13:47 (1068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-19 03:13:47 (1068): Guest Log: [INFO] Detected branch: prod
2026-04-19 03:13:47 (1068): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-19 03:13:47 (1068): Guest Log: Copying input files
2026-04-19 03:13:49 (1068): Guest Log: Copied input files into RunAtlas.
2026-04-19 03:13:49 (1068): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-19 03:13:49 (1068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-19 03:13:49 (1068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-19 03:13:49 (1068): Guest Log: Further information can be found at the LHC@home message board.
2026-04-19 03:13:51 (1068): Guest Log: 00:00:10.010716 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 166 088 000ns (GuestNow=1 776 561 231 224 508 000 ns GuestLast=1 776 568 419 390 596 000 ns fSetTimeLastLoop=true )
2026-04-19 03:13:59 (1068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-19 03:14:00 (1068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-19 03:14:00 (1068): Guest Log: 2.6.3.0 1537 0 30064 158603 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-19 03:14:04 (1068): Guest Log: copied the webapp to /var/www
2026-04-19 03:14:04 (1068): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-19 03:14:04 (1068): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-19 03:14:04 (1068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-19 03:14:04 (1068): Guest Log:  *** Starting ATLAS job. (PandaID=7090951308 taskID=49645815) ***
2026-04-19 04:57:23 (1068): Status Report: Elapsed Time: '6000.861250'
2026-04-19 04:57:23 (1068): Status Report: CPU Time: '10712.859375'
2026-04-19 06:41:45 (1068): Status Report: Elapsed Time: '12001.206133'
2026-04-19 06:41:45 (1068): Status Report: CPU Time: '22640.062500'
2026-04-19 08:25:33 (1068): Status Report: Elapsed Time: '18001.707987'
2026-04-19 08:25:33 (1068): Status Report: CPU Time: '34483.187500'
2026-04-19 10:09:15 (1068): Status Report: Elapsed Time: '24002.029810'
2026-04-19 10:09:15 (1068): Status Report: CPU Time: '46317.187500'
2026-04-19 11:52:27 (1068): Status Report: Elapsed Time: '30002.752859'
2026-04-19 11:52:27 (1068): Status Report: CPU Time: '58170.015625'
2026-04-19 12:39:51 (1068): Guest Log:  *** Job finished ***
2026-04-19 12:39:51 (1068): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:37,213 | INFO     | all workflow threads have been joined
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:37,213 | INFO     | end of generic workflow (traces error code: 0)
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:37,213 | INFO     | traces error code: 0
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:37,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | INFO     | PID=5988 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | INFO     | found 0 job(s) in 20 queues
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,315 | INFO     | [monitor] control thread has ended
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,421 [wrapper] ==== pilot stdout END ====
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,427 [wrapper] ==== wrapper stdout RESUME ====
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,432 [wrapper] pilotpid: 5988
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,437 [wrapper] Pilot exit status: 0
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,556 [wrapper] pandaids: 7090951308
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,586 [wrapper] cleanup supervisor_pilot  1438 5989
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,593 [wrapper] Test setup, not cleaning
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,599 [wrapper] apfmon messages muted
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,605 [wrapper] ==== wrapper stdout END ====
2026-04-19 12:39:51 (1068): Guest Log: 2026-04-19 10:39:50,610 [wrapper] ==== wrapper stderr END ====
2026-04-19 12:39:51 (1068): Guest Log:  *** Error codes and diagnostics ***
2026-04-19 12:39:51 (1068): Guest Log:     "exeErrorCode": 0,
2026-04-19 12:39:51 (1068): Guest Log:     "pilotErrorCode": 0,
2026-04-19 12:39:51 (1068): Guest Log:  *** Listing of results directory ***
2026-04-19 12:39:51 (1068): Guest Log: total 207220
2026-04-19 12:39:51 (1068): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 18 14:18 runpilot2-wrapper.sh
2026-04-19 12:39:51 (1068): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 18 14:36 pilot3.tar.gz
2026-04-19 12:39:51 (1068): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 18 14:39 queuedata.json
2026-04-19 12:39:51 (1068): Guest Log: -rwxr-xr-x. 1 atlas atlas      8965 Apr 19 01:13 init_data.xml
2026-04-19 12:39:51 (1068): Guest Log: -rwxr-xr-x. 1 atlas atlas    656953 Apr 19 01:13 input.tar.gz
2026-04-19 12:39:51 (1068): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 19 01:13 start_atlas.sh
2026-04-19 12:39:51 (1068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 01:13 EVNT.48629115._000264.pool.root.1 -> /data/./ATLAS.root_0
2026-04-19 12:39:51 (1068): Guest Log: -rw-r--r--. 1 atlas atlas      2627 Apr 19 01:14 pandaJob.out
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas    998031 Apr 19 01:19 agis_schedconf.cvmfs.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas       427 Apr 19 01:19 workernode_map.json
2026-04-19 12:39:51 (1068): Guest Log: drwx------. 5 atlas atlas      4096 Apr 19 01:19 pilot3
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas 201232475 Apr 19 10:38 HITS.49645815._017789.pool.root.1
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 10:39 pilot_heartbeat.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas      1025 Apr 19 10:39 memory_monitor_summary.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas   1512404 Apr 19 10:39 agis_ddmendpoints.agis.ALL.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas    470797 Apr 19 10:39 log.49645815._017789.job.log.tgz.1
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas      6399 Apr 19 10:39 heartbeat_new.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas      6290 Apr 19 10:39 heartbeat.json
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas       744 Apr 19 10:39 pilotlog.txt
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas   3014925 Apr 19 10:39 log.49645815._017789.job.log.1
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 10:39 output.list
2026-04-19 12:39:51 (1068): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 19 10:39 runtime_log
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas   3502080 Apr 19 10:39 result.tar.gz
2026-04-19 12:39:51 (1068): Guest Log: -rw-r--r--. 1 atlas atlas      8389 Apr 19 10:39 runtime_log.err
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas       663 Apr 19 10:39 92b6e57b974e.diag
2026-04-19 12:39:51 (1068): Guest Log: Looking for outputfile HITS.49645815._017789.pool.root.1
2026-04-19 12:39:51 (1068): Guest Log: HITS file was successfully produced
2026-04-19 12:39:51 (1068): Guest Log: -rw-------. 1 atlas atlas 201232475 Apr 19 10:38 /home/atlas/RunAtlas/HITS.49645815._017789.pool.root.1
2026-04-19 12:39:52 (1068): Guest Log: Successfully finished the ATLAS job!
2026-04-19 12:39:52 (1068): Guest Log: Copying the results back to the shared directory!
2026-04-19 12:39:52 (1068): Guest Log:  *** Contents of shared directory: ***
2026-04-19 12:39:52 (1068): Guest Log: total 420372
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root 225033875 Apr 19 01:13 ATLAS.root_0
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root 201232475 Apr 19 10:39 HITS.pool.root.1
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root      8965 Apr 19 01:13 init_data.xml
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root    656953 Apr 18 18:20 input.tar.gz
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root   3502080 Apr 19 10:39 result.tar.gz
2026-04-19 12:39:52 (1068): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 18:20 start_atlas.sh
2026-04-19 12:39:52 (1068): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-19 12:39:52 (1068): VM Completion File Detected.
2026-04-19 12:39:52 (1068): Powering off VM.
2026-04-19 12:39:53 (1068): Successfully stopped VM.
2026-04-19 12:39:53 (1068): Deregistering VM. (boinc_54243106f855eb93, slot#2)
2026-04-19 12:39:53 (1068): Removing network bandwidth throttle group from VM.
2026-04-19 12:39:53 (1068): Removing VM from VirtualBox.
2026-04-19 12:39:58 (1068): called boinc_finish(0)

</stderr_txt>
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