Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-19 10:28:11 (5704): vboxwrapper version 26210
2026-04-19 10:28:11 (5704): BOINC client version: 8.2.8
2026-04-19 10:28:12 (5704): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-04-19 10:28:12 (5704): Successfully copied 'init_data.xml' to the shared directory.
2026-04-19 10:28:13 (5704): Create VM. (boinc_a66e4edc01f1aea3, slot#0)
2026-04-19 10:28:13 (5704): Setting Memory Size for VM. (4200MB)
2026-04-19 10:28:13 (5704): Setting CPU Count for VM. (2)
2026-04-19 10:28:14 (5704): Setting Chipset Options for VM.
2026-04-19 10:28:14 (5704): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-19 10:28:14 (5704): Setting Boot Options for VM.
2026-04-19 10:28:15 (5704): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-19 10:28:15 (5704): Enabling VM Network Access.
2026-04-19 10:28:15 (5704): Disabling USB Support for VM.
2026-04-19 10:28:15 (5704): Disabling COM Port Support for VM.
2026-04-19 10:28:16 (5704): Disabling LPT Port Support for VM.
2026-04-19 10:28:16 (5704): Disabling Audio Support for VM.
2026-04-19 10:28:16 (5704): Disabling Clipboard Support for VM.
2026-04-19 10:28:16 (5704): Disabling Drag and Drop Support for VM.
2026-04-19 10:28:17 (5704): Adding storage controller(s) to VM.
2026-04-19 10:28:17 (5704): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-19 10:28:18 (5704): Adding VirtualBox Guest Additions to VM.
2026-04-19 10:28:18 (5704): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-19 10:28:18 (5704): forwarding host port 59753 to guest port 80
2026-04-19 10:28:18 (5704): Enabling remote desktop for VM.
2026-04-19 10:28:19 (5704): Required extension pack not installed, remote desktop not enabled.
2026-04-19 10:28:19 (5704): Enabling shared directory for VM.
2026-04-19 10:28:19 (5704): Starting VM using VBoxManage interface. (boinc_a66e4edc01f1aea3, slot#0)
2026-04-19 10:28:26 (5704): Successfully started VM. (PID = '3952')
2026-04-19 10:28:26 (5704): Reporting VM Process ID to BOINC.
2026-04-19 10:28:26 (5704): Guest Log: BIOS: VirtualBox 7.0.6
2026-04-19 10:28:26 (5704): Guest Log: CPUID EDX: 0x178bfbff
2026-04-19 10:28:26 (5704): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-19 10:28:26 (5704): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-19 10:28:26 (5704): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-19 10:28:26 (5704): Detected: Web Application Enabled (http://localhost:59753)
2026-04-19 10:28:26 (5704): Preference change detected
2026-04-19 10:28:26 (5704): Setting CPU throttle for VM. (100%)
2026-04-19 10:28:26 (5704): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-19 10:28:28 (5704): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-19 10:28:28 (5704): Guest Log: BIOS: Booting from Hard Disk...
2026-04-19 10:28:31 (5704): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-19 10:28:31 (5704): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-19 10:28:31 (5704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-19 10:28:38 (5704): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-19 10:28:38 (5704): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-19 10:28:47 (5704): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000215 main     Log opened 2026-04-19T10:28:45.773851000Z
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000323 main     OS Product: Linux
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000363 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000395 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000428 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000429 main     Process ID: 1263
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.000430 main     Package type: LINUX_64BITS_GENERIC
2026-04-19 10:28:47 (5704): Guest Log: 00:00:00.002668 main     5.2.32 r132073 started. Verbose level = 0
2026-04-19 10:28:48 (5704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-19 10:28:48 (5704): Guest Log: [INFO] Mounting shared directory
2026-04-19 10:28:48 (5704): Guest Log: [INFO] Checking for init_data.xml
2026-04-19 10:28:53 (5704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-19 10:28:53 (5704): Guest Log: [INFO] Detected branch: prod
2026-04-19 10:28:54 (5704): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-19 10:28:54 (5704): Guest Log: Copying input files
2026-04-19 10:28:57 (5704): Guest Log: Copied input files into RunAtlas.
2026-04-19 10:28:57 (5704): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-19 10:28:57 (5704): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-19 10:28:57 (5704): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-19 10:28:57 (5704): Guest Log: Further information can be found at the LHC@home message board.
2026-04-19 10:28:57 (5704): Guest Log: 00:00:10.023366 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 619 528 000ns (GuestNow=1 776 587 337 176 720 000 ns GuestLast=1 776 594 525 796 248 000 ns fSetTimeLastLoop=true )
2026-04-19 10:29:12 (5704): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-19 10:29:13 (5704): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-19 10:29:13 (5704): Guest Log: 2.6.3.0 1538 0 30132 158613 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-19 10:29:14 (5704): Guest Log: copied the webapp to /var/www
2026-04-19 10:29:14 (5704): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-19 10:29:14 (5704): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-19 10:29:16 (5704): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-19 10:29:16 (5704): Guest Log:  *** Starting ATLAS job. (PandaID=7090977650 taskID=49263191) ***
2026-04-19 12:12:42 (5704): Status Report: Elapsed Time: '6000.401484'
2026-04-19 12:12:42 (5704): Status Report: CPU Time: '11156.953125'
2026-04-19 13:56:38 (5704): Status Report: Elapsed Time: '12001.138813'
2026-04-19 13:56:38 (5704): Status Report: CPU Time: '23479.906250'
2026-04-19 15:40:36 (5704): Status Report: Elapsed Time: '18001.777672'
2026-04-19 15:40:36 (5704): Status Report: CPU Time: '35957.328125'
2026-04-19 17:24:30 (5704): Status Report: Elapsed Time: '24002.710882'
2026-04-19 17:24:30 (5704): Status Report: CPU Time: '48420.156250'
2026-04-19 17:28:57 (5704): Guest Log:  *** Job finished ***
2026-04-19 17:28:57 (5704): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:21,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:21,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:48,746 | INFO     | [monitor] cgroup control has ended
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:50,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627627087680)>', '<ExcThread(monitor, started 139626945693440)>']
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:50,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:50,555 | INFO     | [monitor] control thread has ended
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,385 | INFO     | all workflow threads have been joined
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,385 | INFO     | end of generic workflow (traces error code: 0)
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,385 | INFO     | traces error code: 0
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,478 [wrapper] ==== pilot stdout END ====
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,483 [wrapper] ==== wrapper stdout RESUME ====
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,489 [wrapper] pilotpid: 5921
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,493 [wrapper] Pilot exit status: 0
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,614 [wrapper] pandaids: 7090977650
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,645 [wrapper] cleanup supervisor_pilot 31016 5922
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,654 [wrapper] Test setup, not cleaning
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,659 [wrapper] apfmon messages muted
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,664 [wrapper] ==== wrapper stdout END ====
2026-04-19 17:28:57 (5704): Guest Log: 2026-04-19 15:28:55,669 [wrapper] ==== wrapper stderr END ====
2026-04-19 17:28:57 (5704): Guest Log:  *** Error codes and diagnostics ***
2026-04-19 17:28:57 (5704): Guest Log:     "exeErrorCode": 0,
2026-04-19 17:28:57 (5704): Guest Log:     "pilotErrorCode": 0,
2026-04-19 17:28:57 (5704): Guest Log:  *** Listing of results directory ***
2026-04-19 17:28:57 (5704): Guest Log: total 201112
2026-04-19 17:28:57 (5704): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 18 14:18 runpilot2-wrapper.sh
2026-04-19 17:28:57 (5704): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 18 14:36 pilot3.tar.gz
2026-04-19 17:28:57 (5704): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 18 14:39 queuedata.json
2026-04-19 17:28:57 (5704): Guest Log: -rwxr-xr-x. 1 atlas atlas      8965 Apr 19 08:28 init_data.xml
2026-04-19 17:28:57 (5704): Guest Log: -rwxr-xr-x. 1 atlas atlas    656935 Apr 19 08:28 input.tar.gz
2026-04-19 17:28:57 (5704): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 19 08:28 start_atlas.sh
2026-04-19 17:28:57 (5704): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 08:28 EVNT.49263189._001545.pool.root.1 -> /data/./ATLAS.root_0
2026-04-19 17:28:57 (5704): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 19 08:29 pandaJob.out
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas    997681 Apr 19 08:30 agis_schedconf.cvmfs.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas       427 Apr 19 08:30 workernode_map.json
2026-04-19 17:28:57 (5704): Guest Log: drwx------. 5 atlas atlas      4096 Apr 19 08:30 pilot3
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas 196635099 Apr 19 15:27 HITS.49263191._072454.pool.root.1
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 19 15:27 memory_monitor_summary.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas   1512404 Apr 19 15:27 agis_ddmendpoints.agis.ALL.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas    398546 Apr 19 15:27 log.49263191._072454.job.log.tgz.1
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas      6394 Apr 19 15:27 heartbeat_new.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas      6285 Apr 19 15:27 heartbeat.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 15:28 pilot_heartbeat.json
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas      4800 Apr 19 15:28 pilotlog.txt
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas   2257741 Apr 19 15:28 log.49263191._072454.job.log.1
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 15:28 output.list
2026-04-19 17:28:57 (5704): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 19 15:28 runtime_log
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas   2672640 Apr 19 15:28 result.tar.gz
2026-04-19 17:28:57 (5704): Guest Log: -rw-r--r--. 1 atlas atlas      8389 Apr 19 15:28 runtime_log.err
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas       663 Apr 19 15:28 92aab1eb5118.diag
2026-04-19 17:28:57 (5704): Guest Log: Looking for outputfile HITS.49263191._072454.pool.root.1
2026-04-19 17:28:57 (5704): Guest Log: HITS file was successfully produced
2026-04-19 17:28:57 (5704): Guest Log: -rw-------. 1 atlas atlas 196635099 Apr 19 15:27 /home/atlas/RunAtlas/HITS.49263191._072454.pool.root.1
2026-04-19 17:28:58 (5704): Guest Log: Successfully finished the ATLAS job!
2026-04-19 17:28:58 (5704): Guest Log: Copying the results back to the shared directory!
2026-04-19 17:28:58 (5704): Guest Log:  *** Contents of shared directory: ***
2026-04-19 17:28:58 (5704): Guest Log: total 415300
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root 225265534 Apr 19 08:28 ATLAS.root_0
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root 196635099 Apr 19 15:28 HITS.pool.root.1
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root      8965 Apr 19 08:28 init_data.xml
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root    656935 Apr 18 18:18 input.tar.gz
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root   2672640 Apr 19 15:28 result.tar.gz
2026-04-19 17:28:58 (5704): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 18:18 start_atlas.sh
2026-04-19 17:28:58 (5704): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-19 17:28:58 (5704): VM Completion File Detected.
2026-04-19 17:28:58 (5704): Powering off VM.
2026-04-19 17:28:59 (5704): Successfully stopped VM.
2026-04-19 17:28:59 (5704): Deregistering VM. (boinc_a66e4edc01f1aea3, slot#0)
2026-04-19 17:28:59 (5704): Removing network bandwidth throttle group from VM.
2026-04-19 17:28:59 (5704): Removing VM from VirtualBox.
2026-04-19 17:29:04 (5704): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN