Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:50:51 (3856840): wrapper (7.7.26015): starting
04:50:51 (3856840): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 04:50:51] Arguments: --nthreads 4
[2026-04-21 04:50:51] Threads: 4
[2026-04-21 04:50:51] Checking for CVMFS
[2026-04-21 04:50:51] No cvmfs_config command found, will try listing directly
[2026-04-21 04:50:51] CVMFS is ok
[2026-04-21 04:50:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 04:50:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 04:50:51] Further information can be found at the LHC@home message board.
[2026-04-21 04:50:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 04:50:51] Checking for apptainer binary...
[2026-04-21 04:50:51] which: no apptainer in ((null))
[2026-04-21 04:50:51] apptainer is not installed, using version from CVMFS
[2026-04-21 04:50:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 04:50:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-21 04:50:51] apptainer works
[2026-04-21 04:50:51] Set ATHENA_PROC_NUMBER=4
[2026-04-21 04:50:51] Set ATHENA_CORE_NUMBER=4
[2026-04-21 04:50:51] Starting ATLAS job with PandaID=7101023249
[2026-04-21 04:50:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 08:52:08]  *** The last 200 lines of the pilot log: ***
[2026-04-21 08:52:08] 2026-04-21 06:48:35,408 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/0/workernode_map.json
[2026-04-21 08:52:08] 2026-04-21 06:48:35,408 | INFO     | this job has now completed (state=finished)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,408 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,409 | INFO     | log transfer has been attempted: DONE
[2026-04-21 08:52:08] 2026-04-21 06:48:35,409 | INFO     | job 7101023249 has finished - writing final server update
[2026-04-21 08:52:08] 2026-04-21 06:48:35,409 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9242/.job.ad'
[2026-04-21 08:52:08] 2026-04-21 06:48:35,409 | INFO     | total number of processed events: 400 (read)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,430 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/PanDA_Pilot-7101023249/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,430 | INFO     | extracted standard info from prmon json
[2026-04-21 08:52:08] 2026-04-21 06:48:35,430 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 08:52:08] 2026-04-21 06:48:35,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 08:52:08] 2026-04-21 06:48:35,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 08:52:08] 2026-04-21 06:48:35,434 | INFO     | fitting pss+swap vs Time
[2026-04-21 08:52:08] 2026-04-21 06:48:35,434 | INFO     | sum of square deviations: 3922276332.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,436 | INFO     | sum of deviations: 26024027522.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,436 | INFO     | mean x (centered): 0.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,436 | INFO     | mean y: 2360341.339055794
[2026-04-21 08:52:08] 2026-04-21 06:48:35,436 | INFO     | intersect: 2360341.339055794
[2026-04-21 08:52:08] 2026-04-21 06:48:35,436 | INFO     | chi2: 1.360859794693092
[2026-04-21 08:52:08] 2026-04-21 06:48:35,437 | INFO     | sum of square deviations: 3675146117.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,438 | INFO     | sum of deviations: 25384863574.5
[2026-04-21 08:52:08] 2026-04-21 06:48:35,438 | INFO     | mean x (centered): 0.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,438 | INFO     | mean y: 2359946.8640350876
[2026-04-21 08:52:08] 2026-04-21 06:48:35,438 | INFO     | intersect: 2359946.8640350876
[2026-04-21 08:52:08] 2026-04-21 06:48:35,439 | INFO     | chi2: 1.3615026939001262
[2026-04-21 08:52:08] 2026-04-21 06:48:35,439 | INFO     | current chi2=1.3615026939001262 (change=-0.04724213394658981 %)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,439 | INFO     | right removable region: 227
[2026-04-21 08:52:08] 2026-04-21 06:48:35,439 | INFO     | sum of square deviations: 3675146117.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,440 | INFO     | sum of deviations: -3999646444.5000014
[2026-04-21 08:52:08] 2026-04-21 06:48:35,440 | INFO     | mean x (centered): 0.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,441 | INFO     | mean y: 2378658.442982456
[2026-04-21 08:52:08] 2026-04-21 06:48:35,441 | INFO     | intersect: 2378658.442982456
[2026-04-21 08:52:08] 2026-04-21 06:48:35,441 | INFO     | chi2: 0.02774302810706682
[2026-04-21 08:52:08] 2026-04-21 06:48:35,441 | INFO     | current chi2=0.02774302810706682 (change=97.96136029477427 %)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,441 | INFO     | sum of square deviations: 3438620752.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | sum of deviations: -4210363533.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | mean x (centered): 0.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | mean y: 2378777.139013453
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | intersect: 2378777.139013453
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | chi2: 0.023488801945210087
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | current chi2=0.023488801945210087 (change=15.334397331966363 %)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,443 | INFO     | left removable region: 10
[2026-04-21 08:52:08] 2026-04-21 06:48:35,444 | INFO     | sum of square deviations: 3168461268.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,445 | INFO     | sum of deviations: -4191806356.9999986
[2026-04-21 08:52:08] 2026-04-21 06:48:35,445 | INFO     | mean x (centered): 0.0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,445 | INFO     | mean y: 2378789.718894009
[2026-04-21 08:52:08] 2026-04-21 06:48:35,445 | INFO     | intersect: 2378789.718894009
[2026-04-21 08:52:08] 2026-04-21 06:48:35,445 | INFO     | chi2: 0.023413791850128773
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | current memory leak: -1.32 B/s (using 217 data points, chi2=0.02)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | could have reported an average CPU frequency of 2689 MHz (11 samples)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | ..............................
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . Timing measurements:
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . get job = 0 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . initial setup = 8 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . payload setup = 15 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . stage-in = 0 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . payload execution = 14207 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,446 | INFO     | . stage-out = 0 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,447 | INFO     | . log creation = 0 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,447 | INFO     | ..............................
[2026-04-21 08:52:08] 2026-04-21 06:48:35,547 | INFO     | 
[2026-04-21 08:52:08] 2026-04-21 06:48:35,547 | INFO     | job summary report
[2026-04-21 08:52:08] 2026-04-21 06:48:35,547 | INFO     | --------------------------------------------------
[2026-04-21 08:52:08] 2026-04-21 06:48:35,547 | INFO     | PanDA job id: 7101023249
[2026-04-21 08:52:08] 2026-04-21 06:48:35,547 | INFO     | task id: 49820375
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | errors: (none)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | pilot state: finished 
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | transexitcode: 0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | exeerrorcode: 0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | exeerrordiag: 
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | exitcode: 0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | exitmsg: OK
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | cpuconsumptiontime: 54565 s
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | nevents: 400
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | neventsw: 0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | pid: 3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | pgrp: 3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | corecount: 4
[2026-04-21 08:52:08] 2026-04-21 06:48:35,548 | INFO     | event service: False
[2026-04-21 08:52:08] 2026-04-21 06:48:35,549 | INFO     | sizes: {0: 2281649, 1: 2283478, 11: 2283478, 14226: 2314779, 14227: 2314778, 14228: 2323854, 14229: 2324038, 14230: 2324232}
[2026-04-21 08:52:08] 2026-04-21 06:48:35,549 | INFO     | --------------------------------------------------
[2026-04-21 08:52:08] 2026-04-21 06:48:35,549 | INFO     | 
[2026-04-21 08:52:08] 2026-04-21 06:48:35,549 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/0
[2026-04-21 08:52:08] 2026-04-21 06:48:35,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 08:52:08] 2026-04-21 06:48:35,585 | INFO     | job 7101023249 has completed (purged errors)
[2026-04-21 08:52:08] 2026-04-21 06:48:35,586 | INFO     | overall cleanup function is called
[2026-04-21 08:52:08] 2026-04-21 06:48:36,596 | INFO     | --- collectZombieJob: --- 10, [3866487]
[2026-04-21 08:52:08] 2026-04-21 06:48:36,596 | INFO     | zombie collector waiting for pid 3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:36,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 08:52:08] 2026-04-21 06:48:36,596 | INFO     | collected zombie processes
[2026-04-21 08:52:08] 2026-04-21 06:48:36,597 | INFO     | will attempt to kill all subprocesses of pid=3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:37,480 | INFO     | process IDs to be killed: [3866487] (in reverse order)
[2026-04-21 08:52:08] 2026-04-21 06:48:37,742 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 08:52:08] 2026-04-21 06:48:37,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 08:52:08] 2026-04-21 06:48:37,812 | INFO     | did not find any defunct processes belonging to 3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:37,873 | INFO     | did not find any defunct processes belonging to 3866487
[2026-04-21 08:52:08] 2026-04-21 06:48:37,873 | INFO     | Ready for new job
[2026-04-21 08:52:08] 2026-04-21 06:48:37,876 | INFO     | **************************************
[2026-04-21 08:52:08] 2026-04-21 06:48:37,876 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 08:52:08] 2026-04-21 06:48:37,876 | INFO     | **************************************
[2026-04-21 08:52:08] 2026-04-21 06:48:37,876 | INFO     | 
[2026-04-21 08:52:08] 2026-04-21 06:48:37,888 | INFO     | architecture information:
[2026-04-21 08:52:08] 2026-04-21 06:48:37,888 | INFO     | executing command: cat /etc/os-release
[2026-04-21 08:52:08] 2026-04-21 06:48:37,913 | INFO     | cat /etc/os-release:
[2026-04-21 08:52:08] NAME="CentOS Linux"
[2026-04-21 08:52:08] VERSION="7 (Core)"
[2026-04-21 08:52:08] ID="centos"
[2026-04-21 08:52:08] ID_LIKE="rhel fedora"
[2026-04-21 08:52:08] VERSION_ID="7"
[2026-04-21 08:52:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 08:52:08] ANSI_COLOR="0;31"
[2026-04-21 08:52:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 08:52:08] HOME_URL="https://www.centos.org/"
[2026-04-21 08:52:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 08:52:08] 
[2026-04-21 08:52:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 08:52:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 08:52:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 08:52:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 08:52:08] 
[2026-04-21 08:52:08] 2026-04-21 06:48:37,914 | INFO     | **************************************
[2026-04-21 08:52:08] 2026-04-21 06:48:38,168 | WARNING  | process 3866487 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 08:52:08] 2026-04-21 06:48:38,417 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/0
[2026-04-21 08:52:08] 2026-04-21 06:48:38,445 | INFO     | sufficient remaining disk space (202636263424 B)
[2026-04-21 08:52:08] 2026-04-21 06:48:38,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 08:52:08] 2026-04-21 06:48:38,446 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 08:52:08] 2026-04-21 06:48:38,446 | INFO     | update_server=False
[2026-04-21 08:52:08] 2026-04-21 06:48:38,446 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 08:52:08] 2026-04-21 06:48:38,500 | INFO     | all data control threads have been joined
[2026-04-21 08:52:08] 2026-04-21 06:48:38,729 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 08:52:08] 2026-04-21 06:48:39,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 08:52:08] 2026-04-21 06:48:39,292 | INFO     | all payload control threads have been joined
[2026-04-21 08:52:08] 2026-04-21 06:48:39,442 | INFO     | number of running child processes to parent process 3866487: 1
[2026-04-21 08:52:08] 2026-04-21 06:48:39,443 | INFO     | maximum number of monitored processes: 6
[2026-04-21 08:52:08] 2026-04-21 06:48:39,443 | INFO     | aborting job monitoring since job object (job id=7101023249) has expired
[2026-04-21 08:52:08] 2026-04-21 06:48:39,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 08:52:08] 2026-04-21 06:48:39,443 | INFO     | will abort loop
[2026-04-21 08:52:08] 2026-04-21 06:48:39,449 | INFO     | [job] retrieve thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:39,505 | INFO     | [data] control thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:39,533 | INFO     | all job control threads have been joined
[2026-04-21 08:52:08] 2026-04-21 06:48:39,595 | INFO     | [payload] failed_post thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:39,632 | INFO     | [job] validate thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,086 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,166 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,171 | INFO     | [payload] validate_post thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,298 | INFO     | [payload] control thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,448 | INFO     | [job] job monitor thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 08:52:08] 2026-04-21 06:48:40,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 08:52:08] 2026-04-21 06:48:40,539 | INFO     | [job] control thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,789 | INFO     | [data] copytool_in thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:40,901 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:41,177 | INFO     | [data] copytool_out thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:41,537 | INFO     | [job] queue monitor thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:44,498 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:48:48,901 | INFO     | job.realtimelogging is not enabled
[2026-04-21 08:52:08] 2026-04-21 06:48:49,905 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 08:52:08] 2026-04-21 06:49:08,412 | INFO     | PID=3860986 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 08:52:08] 2026-04-21 06:49:08,414 | INFO     | .. there are 10 such processes running
[2026-04-21 08:52:08] 2026-04-21 06:49:08,415 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 08:52:08] 2026-04-21 06:49:08,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 08:52:08] 2026-04-21 06:49:08,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 08:52:08] 2026-04-21 06:49:36,880 | INFO     | [monitor] cgroup control has ended
[2026-04-21 08:52:08] 2026-04-21 06:49:38,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22852980090688)>', '<ExcThread(monitor, started 22852744267520)>']
[2026-04-21 08:52:08] 2026-04-21 06:49:38,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 08:52:08] 2026-04-21 06:49:38,553 | INFO     | [monitor] control thread has ended
[2026-04-21 08:52:08] 2026-04-21 06:49:43,394 | INFO     | all workflow threads have been joined
[2026-04-21 08:52:08] 2026-04-21 06:49:43,394 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 08:52:08] 2026-04-21 06:49:43,394 | INFO     | traces error code: 0
[2026-04-21 08:52:08] 2026-04-21 06:49:43,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 08:52:08] 2026-04-21 06:49:43,540 [wrapper] ==== pilot stdout END ====
[2026-04-21 08:52:08] 2026-04-21 06:49:43,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 08:52:08] 2026-04-21 06:49:43,546 [wrapper] pilotpid: 3860986
[2026-04-21 08:52:08] 2026-04-21 06:49:43,550 [wrapper] Pilot exit status: 0
[2026-04-21 08:52:08] 2026-04-21 06:49:43,560 [wrapper] pandaids: 7101023249
[2026-04-21 08:52:08] 2026-04-21 06:49:43,728 [wrapper] cleanup supervisor_pilot 4193921 3860987
[2026-04-21 08:52:08] 2026-04-21 06:49:43,731 [wrapper] Test setup, not cleaning
[2026-04-21 08:52:08] 2026-04-21 06:49:43,735 [wrapper] apfmon messages muted
[2026-04-21 08:52:08] 2026-04-21 06:49:43,738 [wrapper] ==== wrapper stdout END ====
[2026-04-21 08:52:08] 2026-04-21 06:49:43,742 [wrapper] ==== wrapper stderr END ====
[2026-04-21 08:52:08]  *** Error codes and diagnostics ***
[2026-04-21 08:52:08]     "exeErrorCode": 0,
[2026-04-21 08:52:08]     "pilotErrorCode": 0,
[2026-04-21 08:52:08]  *** Listing of results directory ***
[2026-04-21 08:52:08] total 2431840
[2026-04-21 08:52:08] -rwx------. 1 boinc boinc      36322 Apr 18 16:17 runpilot2-wrapper.sh
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc     644190 Apr 18 16:36 pilot3.tar.gz
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc       5094 Apr 18 16:39 queuedata.json
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc        100 Apr 21 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 08:52:08] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 04:50 run_atlas
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc        105 Apr 21 04:50 job.xml
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc 2214745036 Apr 21 04:50 EVNT.49820373._000030.pool.root.1
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc       6538 Apr 21 04:50 init_data.xml
[2026-04-21 08:52:08] drwxrwx--x. 2 boinc boinc       4096 Apr 21 04:50 shared
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc     656921 Apr 21 04:50 input.tar.gz
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc      15665 Apr 21 04:50 start_atlas.sh
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc          0 Apr 21 04:50 boinc_lockfile
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc       2584 Apr 21 04:50 pandaJob.out
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc     996231 Apr 21 04:51 agis_schedconf.cvmfs.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc        442 Apr 21 04:51 workernode_map.json
[2026-04-21 08:52:08] drwx------. 5 boinc boinc       4096 Apr 21 04:51 pilot3
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc  267910691 Apr 21 08:47 HITS.49820375._002379.pool.root.1
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc        488 Apr 21 08:47 boinc_task_state.xml
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc       1028 Apr 21 08:48 memory_monitor_summary.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc    1512404 Apr 21 08:48 agis_ddmendpoints.agis.ALL.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc     437424 Apr 21 08:48 log.49820375._002379.job.log.tgz.1
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc       6371 Apr 21 08:48 heartbeat_new.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc       6262 Apr 21 08:48 heartbeat.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc         95 Apr 21 08:49 pilot_heartbeat.json
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc       5434 Apr 21 08:49 pilotlog.txt
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc    1308528 Apr 21 08:49 log.49820375._002379.job.log.1
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc        357 Apr 21 08:49 output.list
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc        410 Apr 21 08:49 runtime_log
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc    1761280 Apr 21 08:49 result.tar.gz
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc       8827 Apr 21 08:49 runtime_log.err
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc        666 Apr 21 08:49 92911d27845d.diag
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc         27 Apr 21 08:51 wrapper_checkpoint.txt
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc       8192 Apr 21 08:52 boinc_mmap_file
[2026-04-21 08:52:08] -rw-r--r--. 1 boinc boinc      21077 Apr 21 08:52 stderr.txt
[2026-04-21 08:52:08] HITS file was successfully produced:
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc 267910691 Apr 21 08:47 shared/HITS.pool.root.1
[2026-04-21 08:52:08]  *** Contents of shared directory: ***
[2026-04-21 08:52:08] total 2426860
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc 2214745036 Apr 21 04:50 ATLAS.root_0
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc     656921 Apr 21 04:50 input.tar.gz
[2026-04-21 08:52:08] -rw-r--r--. 2 boinc boinc      15665 Apr 21 04:50 start_atlas.sh
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc  267910691 Apr 21 08:47 HITS.pool.root.1
[2026-04-21 08:52:08] -rw-------. 1 boinc boinc    1761280 Apr 21 08:49 result.tar.gz
08:52:10 (3856840): run_atlas exited; CPU time 55517.792075
08:52:10 (3856840): called boinc_finish(0)

</stderr_txt>
]]>

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