Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:51 (1780247): wrapper (7.7.26015): starting
21:45:51 (1780247): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 21:45:51] Arguments: --nthreads 4
[2026-04-20 21:45:51] Threads: 4
[2026-04-20 21:45:51] Checking for CVMFS
[2026-04-20 21:45:51] No cvmfs_config command found, will try listing directly
[2026-04-20 21:45:51] CVMFS is ok
[2026-04-20 21:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 21:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 21:45:51] Further information can be found at the LHC@home message board.
[2026-04-20 21:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 21:45:51] Checking for apptainer binary...
[2026-04-20 21:45:51] which: no apptainer in ((null))
[2026-04-20 21:45:51] apptainer is not installed, using version from CVMFS
[2026-04-20 21:45:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 21:45:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-20 21:45:51] apptainer works
[2026-04-20 21:45:51] Set ATHENA_PROC_NUMBER=4
[2026-04-20 21:45:51] Set ATHENA_CORE_NUMBER=4
[2026-04-20 21:45:51] Starting ATLAS job with PandaID=7101063140
[2026-04-20 21:45:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 02:01:46]  *** The last 200 lines of the pilot log: ***
[2026-04-21 02:01:46] 2026-04-21 00:01:02,031 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9276/.job.ad'
[2026-04-21 02:01:46] 2026-04-21 00:01:02,031 | INFO     | total number of processed events: 400 (read)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,055 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7101063140/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,055 | INFO     | extracted standard info from prmon json
[2026-04-21 02:01:46] 2026-04-21 00:01:02,055 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 02:01:46] 2026-04-21 00:01:02,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 02:01:46] 2026-04-21 00:01:02,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 02:01:46] 2026-04-21 00:01:02,060 | INFO     | fitting pss+swap vs Time
[2026-04-21 02:01:46] 2026-04-21 00:01:02,061 | INFO     | sum of square deviations: 4844974562.5
[2026-04-21 02:01:46] 2026-04-21 00:01:02,062 | INFO     | sum of deviations: 34545901616.00001
[2026-04-21 02:01:46] 2026-04-21 00:01:02,062 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,063 | INFO     | mean y: 2355242.304
[2026-04-21 02:01:46] 2026-04-21 00:01:02,063 | INFO     | intersect: 2355242.304
[2026-04-21 02:01:46] 2026-04-21 00:01:02,063 | INFO     | chi2: 1.3897044710048558
[2026-04-21 02:01:46] 2026-04-21 00:01:02,063 | INFO     | sum of square deviations: 4560048290.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,065 | INFO     | sum of deviations: 33798989556.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,065 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,065 | INFO     | mean y: 2354842.4734693877
[2026-04-21 02:01:46] 2026-04-21 00:01:02,065 | INFO     | intersect: 2354842.4734693877
[2026-04-21 02:01:46] 2026-04-21 00:01:02,066 | INFO     | chi2: 1.390188227383198
[2026-04-21 02:01:46] 2026-04-21 00:01:02,066 | INFO     | current chi2=1.390188227383198 (change=-0.03481001813230134 %)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,066 | INFO     | right removable region: 244
[2026-04-21 02:01:46] 2026-04-21 00:01:02,066 | INFO     | sum of square deviations: 4560048290.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,068 | INFO     | sum of deviations: 48206714.00000043
[2026-04-21 02:01:46] 2026-04-21 00:01:02,068 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,068 | INFO     | mean y: 2373529.2040816327
[2026-04-21 02:01:46] 2026-04-21 00:01:02,068 | INFO     | intersect: 2373529.2040816327
[2026-04-21 02:01:46] 2026-04-21 00:01:02,069 | INFO     | chi2: 0.008629665323161817
[2026-04-21 02:01:46] 2026-04-21 00:01:02,069 | INFO     | current chi2=0.008629665323161817 (change=99.37902874292963 %)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,069 | INFO     | sum of square deviations: 4286517580.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,071 | INFO     | sum of deviations: -1260870183.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,071 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,071 | INFO     | mean y: 2374247.4166666665
[2026-04-21 02:01:46] 2026-04-21 00:01:02,071 | INFO     | intersect: 2374247.4166666665
[2026-04-21 02:01:46] 2026-04-21 00:01:02,071 | INFO     | chi2: 0.004502310972387226
[2026-04-21 02:01:46] 2026-04-21 00:01:02,072 | INFO     | current chi2=0.004502310972387226 (change=47.827513538640595 %)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,072 | INFO     | sum of square deviations: 4024149870.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,073 | INFO     | sum of deviations: -514384025.00000024
[2026-04-21 02:01:46] 2026-04-21 00:01:02,074 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,074 | INFO     | mean y: 2373813.936170213
[2026-04-21 02:01:46] 2026-04-21 00:01:02,074 | INFO     | intersect: 2373813.936170213
[2026-04-21 02:01:46] 2026-04-21 00:01:02,074 | INFO     | chi2: 0.004159607067883203
[2026-04-21 02:01:46] 2026-04-21 00:01:02,075 | INFO     | current chi2=0.004159607067883203 (change=7.611733321084088 %)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,075 | INFO     | left removable region: 15
[2026-04-21 02:01:46] 2026-04-21 00:01:02,075 | INFO     | sum of square deviations: 3723716330.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,076 | INFO     | sum of deviations: -558988140.0000002
[2026-04-21 02:01:46] 2026-04-21 00:01:02,077 | INFO     | mean x (centered): 0.0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,077 | INFO     | mean y: 2373786.7379912664
[2026-04-21 02:01:46] 2026-04-21 00:01:02,077 | INFO     | intersect: 2373786.7379912664
[2026-04-21 02:01:46] 2026-04-21 00:01:02,077 | INFO     | chi2: 0.00415490695992279
[2026-04-21 02:01:46] 2026-04-21 00:01:02,077 | INFO     | current memory leak: -0.15 B/s (using 229 data points, chi2=0.00)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | could have reported an average CPU frequency of 2709 MHz (12 samples)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | ..............................
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . Timing measurements:
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . get job = 0 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . initial setup = 8 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . payload setup = 15 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . stage-in = 0 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . payload execution = 15253 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . stage-out = 1 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,078 | INFO     | . log creation = 0 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,079 | INFO     | ..............................
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | job summary report
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | --------------------------------------------------
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | PanDA job id: 7101063140
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | task id: 49820244
[2026-04-21 02:01:46] 2026-04-21 00:01:02,577 | INFO     | errors: (none)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | pilot state: finished 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | transexitcode: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | exeerrorcode: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | exeerrordiag: 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | exitcode: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | exitmsg: OK
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | cpuconsumptiontime: 58752 s
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | nevents: 400
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | neventsw: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | pid: 1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:02,578 | INFO     | pgrp: 1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | corecount: 4
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | event service: False
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | sizes: {0: 2281616, 1: 2283445, 12: 2283445, 15272: 2315446, 15273: 2324524, 15274: 2324662}
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | --------------------------------------------------
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,579 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-04-21 02:01:46] 2026-04-21 00:01:02,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | job 7101063140 has completed (purged errors)
[2026-04-21 02:01:46] 2026-04-21 00:01:02,616 | INFO     | overall cleanup function is called
[2026-04-21 02:01:46] 2026-04-21 00:01:02,988 | INFO     | PID=1784733 has CPU usage=20.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 02:01:46] 2026-04-21 00:01:02,988 | INFO     | .. there are 12 such processes running
[2026-04-21 02:01:46] 2026-04-21 00:01:03,628 | INFO     | --- collectZombieJob: --- 10, [1789932]
[2026-04-21 02:01:46] 2026-04-21 00:01:03,628 | INFO     | zombie collector waiting for pid 1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:03,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 02:01:46] 2026-04-21 00:01:03,628 | INFO     | collected zombie processes
[2026-04-21 02:01:46] 2026-04-21 00:01:03,629 | INFO     | will attempt to kill all subprocesses of pid=1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:04,305 | INFO     | process IDs to be killed: [1789932] (in reverse order)
[2026-04-21 02:01:46] 2026-04-21 00:01:04,559 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 02:01:46] 2026-04-21 00:01:04,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 02:01:46] 2026-04-21 00:01:04,586 | INFO     | did not find any defunct processes belonging to 1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:04,608 | INFO     | did not find any defunct processes belonging to 1789932
[2026-04-21 02:01:46] 2026-04-21 00:01:04,608 | INFO     | Ready for new job
[2026-04-21 02:01:46] 2026-04-21 00:01:04,611 | INFO     | **************************************
[2026-04-21 02:01:46] 2026-04-21 00:01:04,611 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 02:01:46] 2026-04-21 00:01:04,611 | INFO     | **************************************
[2026-04-21 02:01:46] 2026-04-21 00:01:04,611 | INFO     | 
[2026-04-21 02:01:46] 2026-04-21 00:01:04,619 | INFO     | architecture information:
[2026-04-21 02:01:46] 2026-04-21 00:01:04,619 | INFO     | executing command: cat /etc/os-release
[2026-04-21 02:01:46] 2026-04-21 00:01:04,645 | INFO     | cat /etc/os-release:
[2026-04-21 02:01:46] NAME="CentOS Linux"
[2026-04-21 02:01:46] VERSION="7 (Core)"
[2026-04-21 02:01:46] ID="centos"
[2026-04-21 02:01:46] ID_LIKE="rhel fedora"
[2026-04-21 02:01:46] VERSION_ID="7"
[2026-04-21 02:01:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 02:01:46] ANSI_COLOR="0;31"
[2026-04-21 02:01:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 02:01:46] HOME_URL="https://www.centos.org/"
[2026-04-21 02:01:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 02:01:46] 
[2026-04-21 02:01:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 02:01:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 02:01:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 02:01:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 02:01:46] 
[2026-04-21 02:01:46] 2026-04-21 00:01:04,645 | INFO     | **************************************
[2026-04-21 02:01:46] 2026-04-21 00:01:05,149 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-04-21 02:01:46] 2026-04-21 00:01:05,172 | INFO     | sufficient remaining disk space (237459472384 B)
[2026-04-21 02:01:46] 2026-04-21 00:01:05,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 02:01:46] 2026-04-21 00:01:05,173 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 02:01:46] 2026-04-21 00:01:05,173 | INFO     | update_server=False
[2026-04-21 02:01:46] 2026-04-21 00:01:05,173 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 02:01:46] 2026-04-21 00:01:05,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:01:46] 2026-04-21 00:01:05,174 | INFO     | aborting loop
[2026-04-21 02:01:46] 2026-04-21 00:01:05,992 | INFO     | all data control threads have been joined
[2026-04-21 02:01:46] 2026-04-21 00:01:06,066 | INFO     | all payload control threads have been joined
[2026-04-21 02:01:46] 2026-04-21 00:01:06,179 | INFO     | [job] retrieve thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,180 | INFO     | [job] job monitor thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,287 | INFO     | [data] copytool_in thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 02:01:46] 2026-04-21 00:01:06,739 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,821 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,867 | INFO     | [job] validate thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:06,879 | INFO     | all job control threads have been joined
[2026-04-21 02:01:46] 2026-04-21 00:01:06,997 | INFO     | [data] control thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:07,002 [wrapper] supervise_pilot (15 min periods counter: 18)
[2026-04-21 02:01:46] 2026-04-21 00:01:07,072 | INFO     | [payload] control thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:07,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 02:01:46] 2026-04-21 00:01:07,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:01:46] 2026-04-21 00:01:07,227 | INFO     | [payload] validate_post thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:07,364 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:07,663 | INFO     | [payload] failed_post thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:07,887 | INFO     | [job] control thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:08,185 | INFO     | [job] queue monitor thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:08,491 | INFO     | [data] copytool_out thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:11,086 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:15,913 | INFO     | job.realtimelogging is not enabled
[2026-04-21 02:01:46] 2026-04-21 00:01:16,919 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 02:01:46] 2026-04-21 00:01:35,893 | INFO     | PID=1784733 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 02:01:46] 2026-04-21 00:01:35,894 | INFO     | .. there are 12 such processes running
[2026-04-21 02:01:46] 2026-04-21 00:01:35,894 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 02:01:46] 2026-04-21 00:01:35,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 02:01:46] 2026-04-21 00:01:35,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 02:01:46] 2026-04-21 00:01:39,895 | INFO     | [monitor] cgroup control has ended
[2026-04-21 02:01:46] 2026-04-21 00:01:41,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23254211258176)>', '<ExcThread(monitor, started 23253967177472)>']
[2026-04-21 02:01:46] 2026-04-21 00:01:41,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 02:01:46] 2026-04-21 00:01:41,924 | INFO     | [monitor] control thread has ended
[2026-04-21 02:01:46] 2026-04-21 00:01:46,349 | INFO     | all workflow threads have been joined
[2026-04-21 02:01:46] 2026-04-21 00:01:46,349 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 02:01:46] 2026-04-21 00:01:46,350 | INFO     | traces error code: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:46,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 02:01:46] 2026-04-21 00:01:46,532 [wrapper] ==== pilot stdout END ====
[2026-04-21 02:01:46] 2026-04-21 00:01:46,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 02:01:46] 2026-04-21 00:01:46,540 [wrapper] pilotpid: 1784733
[2026-04-21 02:01:46] 2026-04-21 00:01:46,546 [wrapper] Pilot exit status: 0
[2026-04-21 02:01:46] 2026-04-21 00:01:46,560 [wrapper] pandaids: 7101063140
[2026-04-21 02:01:46] 2026-04-21 00:01:46,734 [wrapper] cleanup supervisor_pilot 2211682 1784734
[2026-04-21 02:01:46] 2026-04-21 00:01:46,739 [wrapper] Test setup, not cleaning
[2026-04-21 02:01:46] 2026-04-21 00:01:46,743 [wrapper] apfmon messages muted
[2026-04-21 02:01:46] 2026-04-21 00:01:46,748 [wrapper] ==== wrapper stdout END ====
[2026-04-21 02:01:46] 2026-04-21 00:01:46,752 [wrapper] ==== wrapper stderr END ====
[2026-04-21 02:01:46]  *** Error codes and diagnostics ***
[2026-04-21 02:01:46]     "exeErrorCode": 0,
[2026-04-21 02:01:46]     "pilotErrorCode": 0,
[2026-04-21 02:01:46]  *** Listing of results directory ***
[2026-04-21 02:01:46] total 2476964
[2026-04-21 02:01:46] -rwx------. 1 boinc boinc      36322 Apr 18 16:17 runpilot2-wrapper.sh
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc     644190 Apr 18 16:36 pilot3.tar.gz
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc       5094 Apr 18 16:39 queuedata.json
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc        100 Apr 20 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 02:01:46] -rwxr-xr-x. 1 boinc boinc       7986 Apr 20 21:45 run_atlas
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc        105 Apr 20 21:45 job.xml
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc       6540 Apr 20 21:45 init_data.xml
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc 2251264385 Apr 20 21:45 EVNT.49820242._000009.pool.root.1
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc      15665 Apr 20 21:45 start_atlas.sh
[2026-04-21 02:01:46] drwxrwx--x. 2 boinc boinc       4096 Apr 20 21:45 shared
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc     656906 Apr 20 21:45 input.tar.gz
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc          0 Apr 20 21:45 boinc_lockfile
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc       2550 Apr 20 21:45 pandaJob.out
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc     997849 Apr 20 21:46 agis_schedconf.cvmfs.json
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc        444 Apr 20 21:46 workernode_map.json
[2026-04-21 02:01:46] drwx------. 5 boinc boinc       4096 Apr 20 21:46 pilot3
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc  277441572 Apr 21 02:00 HITS.49820244._001645.pool.root.1
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc        489 Apr 21 02:00 boinc_task_state.xml
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc         95 Apr 21 02:00 pilot_heartbeat.json
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc       1031 Apr 21 02:00 memory_monitor_summary.json
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc    1512404 Apr 21 02:01 agis_ddmendpoints.agis.ALL.json
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc     412279 Apr 21 02:01 log.49820244._001645.job.log.tgz.1
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc       6391 Apr 21 02:01 heartbeat_new.json
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc       6282 Apr 21 02:01 heartbeat.json
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc         28 Apr 21 02:01 wrapper_checkpoint.txt
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc       8192 Apr 21 02:01 boinc_mmap_file
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc       4902 Apr 21 02:01 pilotlog.txt
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc    1408451 Apr 21 02:01 log.49820244._001645.job.log.1
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc        357 Apr 21 02:01 output.list
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc        410 Apr 21 02:01 runtime_log
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc    1843200 Apr 21 02:01 result.tar.gz
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc        666 Apr 21 02:01 928492ac7d0e.diag
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc       8844 Apr 21 02:01 runtime_log.err
[2026-04-21 02:01:46] -rw-r--r--. 1 boinc boinc      20883 Apr 21 02:01 stderr.txt
[2026-04-21 02:01:46] HITS file was successfully produced:
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc 277441572 Apr 21 02:00 shared/HITS.pool.root.1
[2026-04-21 02:01:46]  *** Contents of shared directory: ***
[2026-04-21 02:01:46] total 2471912
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc 2251264385 Apr 20 21:45 ATLAS.root_0
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc      15665 Apr 20 21:45 start_atlas.sh
[2026-04-21 02:01:46] -rw-r--r--. 2 boinc boinc     656906 Apr 20 21:45 input.tar.gz
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc  277441572 Apr 21 02:00 HITS.pool.root.1
[2026-04-21 02:01:46] -rw-------. 1 boinc boinc    1843200 Apr 21 02:01 result.tar.gz
02:01:48 (1780247): run_atlas exited; CPU time 59748.236369
02:01:48 (1780247): called boinc_finish(0)

</stderr_txt>
]]>

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