Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:04 (12823): wrapper (7.7.26015): starting
04:05:04 (12823): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 04:05:05] Arguments: --nthreads 8
[2026-04-19 04:05:05] Threads: 8
[2026-04-19 04:05:05] Checking for CVMFS
[2026-04-19 04:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 04:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 04:05:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 04:05:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 04:05:11] 2.11.2.0 4855 4895 99504 158603 1 94 15457227 25165825 885 130560 0 1320330 99.837 4460121 28166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 04:05:11] CVMFS is ok
[2026-04-19 04:05:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 04:05:11] Checking for apptainer binary...
[2026-04-19 04:05:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 04:05:11] Running /usr/bin/apptainer --version
[2026-04-19 04:05:11] apptainer version 1.3.2-1.el7
[2026-04-19 04:05:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 04:05:35] cg-vwn497.simple-grid.lan
[2026-04-19 04:05:35] apptainer works
[2026-04-19 04:05:35] Set ATHENA_PROC_NUMBER=8
[2026-04-19 04:05:35] Set ATHENA_CORE_NUMBER=8
[2026-04-19 04:05:35] Starting ATLAS job with PandaID=7101016951
[2026-04-19 04:05:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 09:46:41]  *** The last 200 lines of the pilot log: ***
[2026-04-19 09:46:41] 2026-04-19 07:45:53,197 | INFO     | this job has now completed (state=finished)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,197 | INFO     | log transfer has been attempted: DONE
[2026-04-19 09:46:41] 2026-04-19 07:45:53,197 | INFO     | job 7101016951 has finished - writing final server update
[2026-04-19 09:46:41] 2026-04-19 07:45:53,197 | INFO     | total number of processed events: 400 (read)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,203 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7101016951/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,204 | INFO     | extracted standard info from prmon json
[2026-04-19 09:46:41] 2026-04-19 07:45:53,204 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 09:46:41] 2026-04-19 07:45:53,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 09:46:41] 2026-04-19 07:45:53,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 09:46:41] 2026-04-19 07:45:53,211 | INFO     | fitting pss+swap vs Time
[2026-04-19 09:46:41] 2026-04-19 07:45:53,211 | INFO     | sum of square deviations: 10352419220.5
[2026-04-19 09:46:41] 2026-04-19 07:45:53,215 | INFO     | sum of deviations: 133989778933.00006
[2026-04-19 09:46:41] 2026-04-19 07:45:53,215 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,215 | INFO     | mean y: 2504637.9875776395
[2026-04-19 09:46:41] 2026-04-19 07:45:53,216 | INFO     | intersect: 2504637.9875776395
[2026-04-19 09:46:41] 2026-04-19 07:45:53,216 | INFO     | chi2: 9.075677239144191
[2026-04-19 09:46:41] 2026-04-19 07:45:53,217 | INFO     | sum of square deviations: 9877610318.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,220 | INFO     | sum of deviations: 153632313658.99994
[2026-04-19 09:46:41] 2026-04-19 07:45:53,220 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,220 | INFO     | mean y: 2510858.454258675
[2026-04-19 09:46:41] 2026-04-19 07:45:53,221 | INFO     | intersect: 2510858.454258675
[2026-04-19 09:46:41] 2026-04-19 07:45:53,221 | INFO     | chi2: 8.370338091577638
[2026-04-19 09:46:41] 2026-04-19 07:45:53,221 | INFO     | current chi2=8.370338091577638 (change=7.771752222791303 %)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,221 | INFO     | right removable region: 316
[2026-04-19 09:46:41] 2026-04-19 07:45:53,222 | INFO     | sum of square deviations: 9877610318.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,225 | INFO     | sum of deviations: 14287774288.000015
[2026-04-19 09:46:41] 2026-04-19 07:45:53,226 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,226 | INFO     | mean y: 2543075.5772870663
[2026-04-19 09:46:41] 2026-04-19 07:45:53,226 | INFO     | intersect: 2543075.5772870663
[2026-04-19 09:46:41] 2026-04-19 07:45:53,226 | INFO     | chi2: 3.750875790443229
[2026-04-19 09:46:41] 2026-04-19 07:45:53,227 | INFO     | current chi2=3.750875790443229 (change=58.671119613362045 %)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,227 | INFO     | sum of square deviations: 9417545878.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,231 | INFO     | sum of deviations: -71028392527.5
[2026-04-19 09:46:41] 2026-04-19 07:45:53,231 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,231 | INFO     | mean y: 2571317.560897436
[2026-04-19 09:46:41] 2026-04-19 07:45:53,231 | INFO     | intersect: 2571317.560897436
[2026-04-19 09:46:41] 2026-04-19 07:45:53,232 | INFO     | chi2: 1.1436610412194685
[2026-04-19 09:46:41] 2026-04-19 07:45:53,232 | INFO     | current chi2=1.1436610412194685 (change=69.5094931126918 %)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,233 | INFO     | sum of square deviations: 8971993338.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,236 | INFO     | sum of deviations: -85157364875.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,236 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,236 | INFO     | mean y: 2576130.0195439737
[2026-04-19 09:46:41] 2026-04-19 07:45:53,236 | INFO     | intersect: 2576130.0195439737
[2026-04-19 09:46:41] 2026-04-19 07:45:53,237 | INFO     | chi2: 1.0242851148463497
[2026-04-19 09:46:41] 2026-04-19 07:45:53,237 | INFO     | current chi2=1.0242851148463497 (change=10.438051316833363 %)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,237 | INFO     | left removable region: 15
[2026-04-19 09:46:41] 2026-04-19 07:45:53,238 | INFO     | sum of square deviations: 8456158550.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,241 | INFO     | sum of deviations: -62885743507.99999
[2026-04-19 09:46:41] 2026-04-19 07:45:53,241 | INFO     | mean x (centered): 0.0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,241 | INFO     | mean y: 2583909.511627907
[2026-04-19 09:46:41] 2026-04-19 07:45:53,241 | INFO     | intersect: 2583909.511627907
[2026-04-19 09:46:41] 2026-04-19 07:45:53,242 | INFO     | chi2: 0.2363254280002114
[2026-04-19 09:46:41] 2026-04-19 07:45:53,242 | INFO     | current memory leak: -7.44 B/s (using 301 data points, chi2=0.24)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,243 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,243 | INFO     | ..............................
[2026-04-19 09:46:41] 2026-04-19 07:45:53,243 | INFO     | . Timing measurements:
[2026-04-19 09:46:41] 2026-04-19 07:45:53,243 | INFO     | . get job = 0 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,243 | INFO     | . initial setup = 124 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | . payload setup = 228 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | . stage-in = 0 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | . payload execution = 19784 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | . stage-out = 3 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | . log creation = 1 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,244 | INFO     | ..............................
[2026-04-19 09:46:41] 2026-04-19 07:45:53,361 | INFO     | 
[2026-04-19 09:46:41] 2026-04-19 07:45:53,361 | INFO     | job summary report
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | --------------------------------------------------
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | PanDA job id: 7101016951
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | task id: 49820375
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | errors: (none)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | pilot state: finished 
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | transexitcode: 0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | exeerrorcode: 0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,362 | INFO     | exeerrordiag: 
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | exitcode: 0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | exitmsg: OK
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | cpuconsumptiontime: 94917 s
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | nevents: 400
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | neventsw: 0
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | pid: 21381
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | pgrp: 21381
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | corecount: 8
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | event service: False
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | sizes: {0: 2281583, 1: 2282040, 2: 2283496, 12: 2283496, 20017: 2316871, 20018: 2316870, 20021: 2326054, 20022: 2326110, 20024: 2326304}
[2026-04-19 09:46:41] 2026-04-19 07:45:53,363 | INFO     | --------------------------------------------------
[2026-04-19 09:46:41] 2026-04-19 07:45:53,364 | INFO     | 
[2026-04-19 09:46:41] 2026-04-19 07:45:53,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-19 09:46:41] 2026-04-19 07:45:53,959 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | job 7101016951 has completed (purged errors)
[2026-04-19 09:46:41] 2026-04-19 07:45:53,962 | INFO     | overall cleanup function is called
[2026-04-19 09:46:41] 2026-04-19 07:45:54,971 | INFO     | --- collectZombieJob: --- 10, [21381]
[2026-04-19 09:46:41] 2026-04-19 07:45:54,971 | INFO     | zombie collector waiting for pid 21381
[2026-04-19 09:46:41] 2026-04-19 07:45:54,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 09:46:41] 2026-04-19 07:45:54,971 | INFO     | collected zombie processes
[2026-04-19 09:46:41] 2026-04-19 07:45:54,971 | INFO     | will attempt to kill all subprocesses of pid=21381
[2026-04-19 09:46:41] 2026-04-19 07:45:55,067 | INFO     | process IDs to be killed: [21381] (in reverse order)
[2026-04-19 09:46:41] 2026-04-19 07:45:55,846 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 09:46:41] 2026-04-19 07:45:55,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 09:46:41] 2026-04-19 07:45:55,848 | INFO     | did not find any defunct processes belonging to 21381
[2026-04-19 09:46:41] 2026-04-19 07:45:55,849 | INFO     | did not find any defunct processes belonging to 21381
[2026-04-19 09:46:41] 2026-04-19 07:45:55,850 | INFO     | Ready for new job
[2026-04-19 09:46:41] 2026-04-19 07:45:55,852 | INFO     | **************************************
[2026-04-19 09:46:41] 2026-04-19 07:45:55,852 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 09:46:41] 2026-04-19 07:45:55,852 | INFO     | **************************************
[2026-04-19 09:46:41] 2026-04-19 07:45:55,852 | INFO     | 
[2026-04-19 09:46:41] 2026-04-19 07:45:55,853 | INFO     | pilot is running in a VM
[2026-04-19 09:46:41] 2026-04-19 07:45:55,853 | INFO     | architecture information:
[2026-04-19 09:46:41] 2026-04-19 07:45:55,860 | INFO     | executing command: cat /etc/os-release
[2026-04-19 09:46:41] 2026-04-19 07:45:56,201 | INFO     | cat /etc/os-release:
[2026-04-19 09:46:41] NAME="CentOS Linux"
[2026-04-19 09:46:41] VERSION="7 (Core)"
[2026-04-19 09:46:41] ID="centos"
[2026-04-19 09:46:41] ID_LIKE="rhel fedora"
[2026-04-19 09:46:41] VERSION_ID="7"
[2026-04-19 09:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 09:46:41] ANSI_COLOR="0;31"
[2026-04-19 09:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 09:46:41] HOME_URL="https://www.centos.org/"
[2026-04-19 09:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 09:46:41] 
[2026-04-19 09:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 09:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 09:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 09:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 09:46:41] 
[2026-04-19 09:46:41] 2026-04-19 07:45:56,202 | INFO     | **************************************
[2026-04-19 09:46:41] 2026-04-19 07:45:56,708 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-19 09:46:41] 2026-04-19 07:45:56,847 | INFO     | sufficient remaining disk space (493491322880 B)
[2026-04-19 09:46:41] 2026-04-19 07:45:56,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 09:46:41] 2026-04-19 07:45:56,848 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 09:46:41] 2026-04-19 07:45:56,848 | INFO     | update_server=False
[2026-04-19 09:46:41] 2026-04-19 07:45:56,848 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 09:46:41] 2026-04-19 07:45:56,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 09:46:41] 2026-04-19 07:45:57,144 | INFO     | all data control threads have been joined
[2026-04-19 09:46:41] 2026-04-19 07:45:57,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:46:41] 2026-04-19 07:45:57,337 | INFO     | aborting loop
[2026-04-19 09:46:41] 2026-04-19 07:45:57,854 | INFO     | [job] retrieve thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:57,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 09:46:41] 2026-04-19 07:45:58,051 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,150 | INFO     | [data] control thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,225 | INFO     | all job control threads have been joined
[2026-04-19 09:46:41] 2026-04-19 07:45:58,246 | INFO     | all payload control threads have been joined
[2026-04-19 09:46:41] 2026-04-19 07:45:58,343 | INFO     | [job] job monitor thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,348 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:46:41] 2026-04-19 07:45:58,465 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,586 | INFO     | [job] validate thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,722 | INFO     | [data] copytool_in thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,798 | INFO     | [payload] failed_post thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:58,855 | INFO     | [data] copytool_out thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:59,231 | INFO     | [job] control thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:59,252 | INFO     | [payload] control thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:59,340 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:59,382 | INFO     | [job] queue monitor thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:45:59,433 | INFO     | [payload] validate_post thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:46:01,987 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 09:46:41] 2026-04-19 07:46:25,116 | INFO     | PID=16905 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 09:46:41] 2026-04-19 07:46:25,117 | INFO     | .. there are 2 such processes running
[2026-04-19 09:46:41] 2026-04-19 07:46:25,118 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 09:46:41] 2026-04-19 07:46:25,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 09:46:41] 2026-04-19 07:46:25,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 09:46:41] 2026-04-19 07:46:30,938 | INFO     | [monitor] cgroup control has ended
[2026-04-19 09:46:41] 2026-04-19 07:46:32,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202278369088)>', '<ExcThread(monitor, started 140201984763648)>']
[2026-04-19 09:46:41] 2026-04-19 07:46:33,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 09:46:41] 2026-04-19 07:46:33,166 | INFO     | [monitor] control thread has ended
[2026-04-19 09:46:41] 2026-04-19 07:46:37,542 | INFO     | all workflow threads have been joined
[2026-04-19 09:46:41] 2026-04-19 07:46:37,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 09:46:41] 2026-04-19 07:46:37,542 | INFO     | traces error code: 0
[2026-04-19 09:46:41] 2026-04-19 07:46:37,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 09:46:41] 2026-04-19 07:46:37,962 [wrapper] ==== pilot stdout END ====
[2026-04-19 09:46:41] 2026-04-19 07:46:38,053 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 09:46:41] 2026-04-19 07:46:38,085 [wrapper] pilotpid: 16905
[2026-04-19 09:46:41] 2026-04-19 07:46:38,175 [wrapper] Pilot exit status: 0
[2026-04-19 09:46:41] 2026-04-19 07:46:38,755 [wrapper] pandaids: 7101016951
[2026-04-19 09:46:41] 2026-04-19 07:46:39,931 [wrapper] cleanup supervisor_pilot 12896 16906
[2026-04-19 09:46:41] 2026-04-19 07:46:39,946 [wrapper] Test setup, not cleaning
[2026-04-19 09:46:41] 2026-04-19 07:46:39,950 [wrapper] apfmon messages muted
[2026-04-19 09:46:41] 2026-04-19 07:46:39,962 [wrapper] ==== wrapper stdout END ====
[2026-04-19 09:46:41] 2026-04-19 07:46:39,966 [wrapper] ==== wrapper stderr END ====
[2026-04-19 09:46:41]  *** Error codes and diagnostics ***
[2026-04-19 09:46:41]     "exeErrorCode": 0,
[2026-04-19 09:46:41]     "pilotErrorCode": 0,
[2026-04-19 09:46:41]  *** Listing of results directory ***
[2026-04-19 09:46:41] total 2449008
[2026-04-19 09:46:41] -rwx------. 1 boinc boinc      36322 Apr 18 14:57 runpilot2-wrapper.sh
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc     644190 Apr 18 15:37 pilot3.tar.gz
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc       5094 Apr 18 15:46 queuedata.json
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc        100 Apr 19 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 09:46:41] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 04:05 run_atlas
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc        105 Apr 19 04:05 job.xml
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc       6306 Apr 19 04:05 init_data.xml
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc 2229227461 Apr 19 04:05 EVNT.49820373._000011.pool.root.1
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc      15665 Apr 19 04:05 start_atlas.sh
[2026-04-19 09:46:41] drwxrwx--x. 2 boinc boinc         68 Apr 19 04:05 shared
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc     656923 Apr 19 04:05 input.tar.gz
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc          0 Apr 19 04:05 boinc_lockfile
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc       2584 Apr 19 04:05 pandaJob.out
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc        415 Apr 19 04:11 workernode_map.json
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc     998031 Apr 19 04:11 agis_schedconf.cvmfs.json
[2026-04-19 09:46:41] drwx------. 5 boinc boinc       4096 Apr 19 04:11 pilot3
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc  269779224 Apr 19 09:44 HITS.49820375._001473.pool.root.1
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc        490 Apr 19 09:44 boinc_task_state.xml
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc       1020 Apr 19 09:45 memory_monitor_summary.json
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc    1512404 Apr 19 09:45 agis_ddmendpoints.agis.ALL.json
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc     516992 Apr 19 09:45 log.49820375._001473.job.log.tgz.1
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc       6342 Apr 19 09:45 heartbeat_new.json
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc       6233 Apr 19 09:45 heartbeat.json
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc         95 Apr 19 09:46 pilot_heartbeat.json
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc       8192 Apr 19 09:46 boinc_mmap_file
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc         28 Apr 19 09:46 wrapper_checkpoint.txt
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc       4880 Apr 19 09:46 pilotlog.txt
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc    1846783 Apr 19 09:46 log.49820375._001473.job.log.1
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc        357 Apr 19 09:46 output.list
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc        410 Apr 19 09:46 runtime_log
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc    2385920 Apr 19 09:46 result.tar.gz
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc       8454 Apr 19 09:46 runtime_log.err
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc        656 Apr 19 09:46 7fa665a4da3e.diag
[2026-04-19 09:46:41] -rw-r--r--. 1 boinc boinc      20655 Apr 19 09:46 stderr.txt
[2026-04-19 09:46:41] HITS file was successfully produced:
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc 269779224 Apr 19 09:44 shared/HITS.pool.root.1
[2026-04-19 09:46:41]  *** Contents of shared directory: ***
[2026-04-19 09:46:41] total 2443432
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc 2229227461 Apr 19 04:05 ATLAS.root_0
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc      15665 Apr 19 04:05 start_atlas.sh
[2026-04-19 09:46:41] -rw-r--r--. 2 boinc boinc     656923 Apr 19 04:05 input.tar.gz
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc  269779224 Apr 19 09:44 HITS.pool.root.1
[2026-04-19 09:46:41] -rw-------. 1 boinc boinc    2385920 Apr 19 09:46 result.tar.gz
09:46:42 (12823): run_atlas exited; CPU time 95115.299777
09:46:42 (12823): called boinc_finish(0)

</stderr_txt>
]]>

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