Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:38 (31506): wrapper (7.7.26015): starting
23:27:38 (31506): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 23:27:38] Arguments: --nthreads 8
[2026-04-18 23:27:38] Threads: 8
[2026-04-18 23:27:38] Checking for CVMFS
[2026-04-18 23:27:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 23:27:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 23:27:39] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 23:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 23:27:41] 2.11.2.0 6411 4583 97584 158598 0 53 13697591 25165824 1060 130560 0 1292828 99.343 1808188 14643 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 23:27:41] CVMFS is ok
[2026-04-18 23:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 23:27:41] Checking for apptainer binary...
[2026-04-18 23:27:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 23:27:41] Running /usr/bin/apptainer --version
[2026-04-18 23:27:41] apptainer version 1.3.2-1.el7
[2026-04-18 23:27:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 23:27:52] cg-vwn379.simple-grid.lan
[2026-04-18 23:27:52] apptainer works
[2026-04-18 23:27:52] Set ATHENA_PROC_NUMBER=8
[2026-04-18 23:27:52] Set ATHENA_CORE_NUMBER=8
[2026-04-18 23:27:53] Starting ATLAS job with PandaID=7098328269
[2026-04-18 23:27:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 03:42:32]  *** The last 200 lines of the pilot log: ***
[2026-04-19 03:42:32] 2026-04-19 01:41:36,894 | INFO     | this job has now completed (state=finished)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,895 | INFO     | log transfer has been attempted: DONE
[2026-04-19 03:42:32] 2026-04-19 01:41:36,895 | INFO     | job 7098328269 has finished - writing final server update
[2026-04-19 03:42:32] 2026-04-19 01:41:36,895 | INFO     | total number of processed events: 400 (read)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,897 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7098328269/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,898 | INFO     | extracted standard info from prmon json
[2026-04-19 03:42:32] 2026-04-19 01:41:36,898 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 03:42:32] 2026-04-19 01:41:36,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 03:42:32] 2026-04-19 01:41:36,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 03:42:32] 2026-04-19 01:41:36,906 | INFO     | fitting pss+swap vs Time
[2026-04-19 03:42:32] 2026-04-19 01:41:36,907 | INFO     | sum of square deviations: 4180243959.5
[2026-04-19 03:42:32] 2026-04-19 01:41:36,909 | INFO     | sum of deviations: 100277577096.50002
[2026-04-19 03:42:32] 2026-04-19 01:41:36,909 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,909 | INFO     | mean y: 2409367.306722689
[2026-04-19 03:42:32] 2026-04-19 01:41:36,909 | INFO     | intersect: 2409367.306722689
[2026-04-19 03:42:32] 2026-04-19 01:41:36,909 | INFO     | chi2: 8.249457729241694
[2026-04-19 03:42:32] 2026-04-19 01:41:36,910 | INFO     | sum of square deviations: 3922276332.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,912 | INFO     | sum of deviations: 113560922670.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,912 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,912 | INFO     | mean y: 2417062.115879828
[2026-04-19 03:42:32] 2026-04-19 01:41:36,913 | INFO     | intersect: 2417062.115879828
[2026-04-19 03:42:32] 2026-04-19 01:41:36,913 | INFO     | chi2: 7.556375671909506
[2026-04-19 03:42:32] 2026-04-19 01:41:36,913 | INFO     | current chi2=7.556375671909506 (change=8.401546866231385 %)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,913 | INFO     | right removable region: 232
[2026-04-19 03:42:32] 2026-04-19 01:41:36,914 | INFO     | sum of square deviations: 3922276332.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,916 | INFO     | sum of deviations: 17102725245.000002
[2026-04-19 03:42:32] 2026-04-19 01:41:36,916 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,916 | INFO     | mean y: 2458512.278969957
[2026-04-19 03:42:32] 2026-04-19 01:41:36,916 | INFO     | intersect: 2458512.278969957
[2026-04-19 03:42:32] 2026-04-19 01:41:36,917 | INFO     | chi2: 3.087967473652173
[2026-04-19 03:42:32] 2026-04-19 01:41:36,917 | INFO     | current chi2=3.087967473652173 (change=62.56763080673395 %)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,925 | INFO     | sum of square deviations: 3675146117.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,927 | INFO     | sum of deviations: -35168750107.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,927 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,927 | INFO     | mean y: 2490645.263157895
[2026-04-19 03:42:32] 2026-04-19 01:41:36,927 | INFO     | intersect: 2490645.263157895
[2026-04-19 03:42:32] 2026-04-19 01:41:36,927 | INFO     | chi2: 0.9733877905834558
[2026-04-19 03:42:32] 2026-04-19 01:41:36,928 | INFO     | current chi2=0.9733877905834558 (change=68.47804263196402 %)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,928 | INFO     | sum of square deviations: 3438620752.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,930 | INFO     | sum of deviations: -38790973905.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,930 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,930 | INFO     | mean y: 2492932.6367713003
[2026-04-19 03:42:32] 2026-04-19 01:41:36,930 | INFO     | intersect: 2492932.6367713003
[2026-04-19 03:42:32] 2026-04-19 01:41:36,931 | INFO     | chi2: 0.928451399872919
[2026-04-19 03:42:32] 2026-04-19 01:41:36,931 | INFO     | current chi2=0.928451399872919 (change=4.6164941809678535 %)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,931 | INFO     | left removable region: 15
[2026-04-19 03:42:32] 2026-04-19 01:41:36,931 | INFO     | sum of square deviations: 3168461268.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,933 | INFO     | sum of deviations: -23408111208.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,934 | INFO     | mean x (centered): 0.0
[2026-04-19 03:42:32] 2026-04-19 01:41:36,934 | INFO     | mean y: 2503127.543778802
[2026-04-19 03:42:32] 2026-04-19 01:41:36,934 | INFO     | intersect: 2503127.543778802
[2026-04-19 03:42:32] 2026-04-19 01:41:36,934 | INFO     | chi2: 0.1382425771769263
[2026-04-19 03:42:32] 2026-04-19 01:41:36,935 | INFO     | current memory leak: -7.39 B/s (using 217 data points, chi2=0.14)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,935 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-19 03:42:32] 2026-04-19 01:41:36,935 | INFO     | ..............................
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . Timing measurements:
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . get job = 0 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . initial setup = 116 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . payload setup = 229 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . stage-in = 0 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . payload execution = 14606 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . stage-out = 5 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | . log creation = 1 s
[2026-04-19 03:42:32] 2026-04-19 01:41:36,936 | INFO     | ..............................
[2026-04-19 03:42:32] 2026-04-19 01:41:37,287 | INFO     | 
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | job summary report
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | --------------------------------------------------
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | PanDA job id: 7098328269
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | task id: 49514634
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | errors: (none)
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | pilot state: finished 
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | transexitcode: 0
[2026-04-19 03:42:32] 2026-04-19 01:41:37,288 | INFO     | exeerrorcode: 0
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | exeerrordiag: 
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | exitcode: 0
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | exitmsg: OK
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | cpuconsumptiontime: 54900 s
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | nevents: 400
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | neventsw: 0
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | pid: 7568
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | pgrp: 7568
[2026-04-19 03:42:32] 2026-04-19 01:41:37,289 | INFO     | corecount: 8
[2026-04-19 03:42:32] 2026-04-19 01:41:37,290 | INFO     | event service: False
[2026-04-19 03:42:32] 2026-04-19 01:41:37,290 | INFO     | sizes: {0: 2280797, 1: 2281709, 2: 2283311, 12: 2283311, 14840: 2314258, 14841: 2314257, 14848: 2323439, 14849: 2323689}
[2026-04-19 03:42:32] 2026-04-19 01:41:37,290 | INFO     | --------------------------------------------------
[2026-04-19 03:42:32] 2026-04-19 01:41:37,290 | INFO     | 
[2026-04-19 03:42:32] 2026-04-19 01:41:37,290 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-19 03:42:32] 2026-04-19 01:41:37,784 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,784 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,786 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 03:42:32] 2026-04-19 01:41:37,787 | INFO     | job 7098328269 has completed (purged errors)
[2026-04-19 03:42:32] 2026-04-19 01:41:37,787 | INFO     | overall cleanup function is called
[2026-04-19 03:42:32] 2026-04-19 01:41:38,795 | INFO     | --- collectZombieJob: --- 10, [7568]
[2026-04-19 03:42:32] 2026-04-19 01:41:38,795 | INFO     | zombie collector waiting for pid 7568
[2026-04-19 03:42:32] 2026-04-19 01:41:38,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 03:42:32] 2026-04-19 01:41:38,796 | INFO     | collected zombie processes
[2026-04-19 03:42:32] 2026-04-19 01:41:38,796 | INFO     | will attempt to kill all subprocesses of pid=7568
[2026-04-19 03:42:32] 2026-04-19 01:41:38,894 | INFO     | process IDs to be killed: [7568] (in reverse order)
[2026-04-19 03:42:32] 2026-04-19 01:41:39,719 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 03:42:32] 2026-04-19 01:41:39,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 03:42:32] 2026-04-19 01:41:39,721 | INFO     | did not find any defunct processes belonging to 7568
[2026-04-19 03:42:32] 2026-04-19 01:41:39,723 | INFO     | did not find any defunct processes belonging to 7568
[2026-04-19 03:42:32] 2026-04-19 01:41:39,724 | INFO     | Ready for new job
[2026-04-19 03:42:32] 2026-04-19 01:41:39,726 | INFO     | **************************************
[2026-04-19 03:42:32] 2026-04-19 01:41:39,726 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 03:42:32] 2026-04-19 01:41:39,726 | INFO     | **************************************
[2026-04-19 03:42:32] 2026-04-19 01:41:39,726 | INFO     | 
[2026-04-19 03:42:32] 2026-04-19 01:41:39,730 | INFO     | pilot is running in a VM
[2026-04-19 03:42:32] 2026-04-19 01:41:39,730 | INFO     | architecture information:
[2026-04-19 03:42:32] 2026-04-19 01:41:39,740 | INFO     | executing command: cat /etc/os-release
[2026-04-19 03:42:32] 2026-04-19 01:41:40,030 | INFO     | cat /etc/os-release:
[2026-04-19 03:42:32] NAME="CentOS Linux"
[2026-04-19 03:42:32] VERSION="7 (Core)"
[2026-04-19 03:42:32] ID="centos"
[2026-04-19 03:42:32] ID_LIKE="rhel fedora"
[2026-04-19 03:42:32] VERSION_ID="7"
[2026-04-19 03:42:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 03:42:32] ANSI_COLOR="0;31"
[2026-04-19 03:42:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 03:42:32] HOME_URL="https://www.centos.org/"
[2026-04-19 03:42:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 03:42:32] 
[2026-04-19 03:42:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 03:42:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 03:42:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 03:42:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 03:42:32] 
[2026-04-19 03:42:32] 2026-04-19 01:41:40,030 | INFO     | **************************************
[2026-04-19 03:42:32] 2026-04-19 01:41:40,533 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-19 03:42:32] 2026-04-19 01:41:40,812 | INFO     | sufficient remaining disk space (493917044736 B)
[2026-04-19 03:42:32] 2026-04-19 01:41:40,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 03:42:32] 2026-04-19 01:41:40,812 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 03:42:32] 2026-04-19 01:41:40,813 | INFO     | update_server=False
[2026-04-19 03:42:32] 2026-04-19 01:41:40,813 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 03:42:32] 2026-04-19 01:41:40,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 03:42:32] 2026-04-19 01:41:40,814 | INFO     | aborting loop
[2026-04-19 03:42:32] 2026-04-19 01:41:40,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 03:42:32] 2026-04-19 01:41:41,321 | INFO     | all data control threads have been joined
[2026-04-19 03:42:32] 2026-04-19 01:41:41,818 | INFO     | [job] retrieve thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:41,819 | INFO     | [job] job monitor thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:41,844 | INFO     | all job control threads have been joined
[2026-04-19 03:42:32] 2026-04-19 01:41:42,015 | INFO     | all payload control threads have been joined
[2026-04-19 03:42:32] 2026-04-19 01:41:42,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 03:42:32] 2026-04-19 01:41:42,127 | INFO     | [data] copytool_in thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,165 | INFO     | [job] validate thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,327 | INFO     | [data] control thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,524 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,541 | INFO     | [payload] validate_post thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,548 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,850 | INFO     | [job] control thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,855 | INFO     | [data] copytool_out thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:42,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 03:42:32] 2026-04-19 01:41:43,020 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:43,021 | INFO     | [payload] control thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:43,102 | INFO     | [job] queue monitor thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:43,184 | INFO     | [payload] failed_post thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:41:46,909 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 03:42:32] 2026-04-19 01:42:10,478 | INFO     | PID=3105 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-19 03:42:32] 2026-04-19 01:42:10,479 | INFO     | .. there are 2 such processes running
[2026-04-19 03:42:32] 2026-04-19 01:42:10,480 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 03:42:32] 2026-04-19 01:42:10,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 03:42:32] 2026-04-19 01:42:10,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 03:42:32] 2026-04-19 01:42:20,242 | INFO     | [monitor] cgroup control has ended
[2026-04-19 03:42:32] 2026-04-19 01:42:21,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000004028224)>', '<ExcThread(monitor, started 139999248885504)>']
[2026-04-19 03:42:32] 2026-04-19 01:42:22,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 03:42:32] 2026-04-19 01:42:22,553 | INFO     | [monitor] control thread has ended
[2026-04-19 03:42:32] 2026-04-19 01:42:26,870 | INFO     | all workflow threads have been joined
[2026-04-19 03:42:32] 2026-04-19 01:42:26,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 03:42:32] 2026-04-19 01:42:26,871 | INFO     | traces error code: 0
[2026-04-19 03:42:32] 2026-04-19 01:42:26,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 03:42:32] 2026-04-19 01:42:27,228 [wrapper] ==== pilot stdout END ====
[2026-04-19 03:42:32] 2026-04-19 01:42:27,231 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 03:42:32] 2026-04-19 01:42:27,234 [wrapper] pilotpid: 3105
[2026-04-19 03:42:32] 2026-04-19 01:42:27,238 [wrapper] Pilot exit status: 0
[2026-04-19 03:42:32] 2026-04-19 01:42:27,680 [wrapper] pandaids: 7098328269
[2026-04-19 03:42:32] 2026-04-19 01:42:28,838 [wrapper] cleanup supervisor_pilot 13704 3106
[2026-04-19 03:42:32] 2026-04-19 01:42:28,868 [wrapper] Test setup, not cleaning
[2026-04-19 03:42:32] 2026-04-19 01:42:28,991 [wrapper] apfmon messages muted
[2026-04-19 03:42:32] 2026-04-19 01:42:29,080 [wrapper] ==== wrapper stdout END ====
[2026-04-19 03:42:32] 2026-04-19 01:42:29,190 [wrapper] ==== wrapper stderr END ====
[2026-04-19 03:42:32]  *** Error codes and diagnostics ***
[2026-04-19 03:42:32]     "exeErrorCode": 0,
[2026-04-19 03:42:32]     "pilotErrorCode": 0,
[2026-04-19 03:42:32]  *** Listing of results directory ***
[2026-04-19 03:42:32] total 337904
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc    644190 Apr 18 12:05 pilot3.tar.gz
[2026-04-19 03:42:32] -rwx------. 1 boinc boinc     36322 Apr 18 12:42 runpilot2-wrapper.sh
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc      5094 Apr 18 12:43 queuedata.json
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc       100 Apr 18 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 03:42:32] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 23:27 run_atlas
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc       105 Apr 18 23:27 job.xml
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc      6306 Apr 18 23:27 init_data.xml
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc 188105111 Apr 18 23:27 EVNT.49514628._000044.pool.root.1
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc     15665 Apr 18 23:27 start_atlas.sh
[2026-04-19 03:42:32] drwxrwx--x. 2 boinc boinc        68 Apr 18 23:27 shared
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc    656908 Apr 18 23:27 input.tar.gz
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc         0 Apr 18 23:27 boinc_lockfile
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc      2481 Apr 18 23:27 pandaJob.out
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc       415 Apr 18 23:33 workernode_map.json
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc    997676 Apr 18 23:33 agis_schedconf.cvmfs.json
[2026-04-19 03:42:32] drwx------. 5 boinc boinc      4096 Apr 18 23:33 pilot3
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc 150349882 Apr 19 03:40 HITS.49514634._001609.pool.root.1
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc       489 Apr 19 03:40 boinc_task_state.xml
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc      1011 Apr 19 03:41 memory_monitor_summary.json
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc   1512404 Apr 19 03:41 agis_ddmendpoints.agis.ALL.json
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc    389838 Apr 19 03:41 log.49514634._001609.job.log.tgz.1
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc      6331 Apr 19 03:41 heartbeat_new.json
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc      6222 Apr 19 03:41 heartbeat.json
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc        95 Apr 19 03:42 pilot_heartbeat.json
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc      8192 Apr 19 03:42 boinc_mmap_file
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc        28 Apr 19 03:42 wrapper_checkpoint.txt
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc      4878 Apr 19 03:42 pilotlog.txt
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc   1367063 Apr 19 03:42 log.49514634._001609.job.log.1
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc       357 Apr 19 03:42 output.list
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc       410 Apr 19 03:42 runtime_log
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc   1771520 Apr 19 03:42 result.tar.gz
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc      8438 Apr 19 03:42 runtime_log.err
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc       655 Apr 19 03:42 5ffbcad5ba92.diag
[2026-04-19 03:42:32] -rw-r--r--. 1 boinc boinc     20611 Apr 19 03:42 stderr.txt
[2026-04-19 03:42:32] HITS file was successfully produced:
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc 150349882 Apr 19 03:40 shared/HITS.pool.root.1
[2026-04-19 03:42:32]  *** Contents of shared directory: ***
[2026-04-19 03:42:32] total 332920
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc 188105111 Apr 18 23:27 ATLAS.root_0
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc     15665 Apr 18 23:27 start_atlas.sh
[2026-04-19 03:42:32] -rw-r--r--. 2 boinc boinc    656908 Apr 18 23:27 input.tar.gz
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc 150349882 Apr 19 03:40 HITS.pool.root.1
[2026-04-19 03:42:32] -rw-------. 1 boinc boinc   1771520 Apr 19 03:42 result.tar.gz
03:42:33 (31506): run_atlas exited; CPU time 55055.454238
03:42:33 (31506): called boinc_finish(0)

</stderr_txt>
]]>

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