Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:35:53 (21649): wrapper (7.7.26015): starting
12:35:53 (21649): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 12:35:53] Arguments: --nthreads 8
[2026-04-18 12:35:53] Threads: 8
[2026-04-18 12:35:53] Checking for CVMFS
[2026-04-18 12:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 12:35:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 12:35:54] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 12:35:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 12:35:54] 2.11.2.0 13817 751526 313308 158591 3 52 11857107 18432000 2749 130560 8 421056660 99.751 273627889 24149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-04-18 12:35:54] CVMFS is ok
[2026-04-18 12:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 12:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 12:35:54] Further information can be found at the LHC@home message board.
[2026-04-18 12:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 12:35:54] Checking for apptainer binary...
[2026-04-18 12:35:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 12:35:54] Running /usr/bin/apptainer --version
[2026-04-18 12:35:54] apptainer version 1.3.2-1.el7
[2026-04-18 12:35:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 12:35:55] c-9-29.aglt2.org
[2026-04-18 12:35:55] apptainer works
[2026-04-18 12:35:55] Set ATHENA_PROC_NUMBER=8
[2026-04-18 12:35:55] Set ATHENA_CORE_NUMBER=8
[2026-04-18 12:35:55] Starting ATLAS job with PandaID=7101003337
[2026-04-18 12:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 17:20:43]  *** The last 200 lines of the pilot log: ***
[2026-04-18 17:20:43] 2026-04-18 21:20:09,692 | INFO     | job 7101003337 has state=finished
[2026-04-18 17:20:43] 2026-04-18 21:20:09,693 | INFO     | preparing for final server update for job 7101003337 in state='finished'
[2026-04-18 17:20:43] 2026-04-18 21:20:09,693 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7101003337/jobReport.json
[2026-04-18 17:20:43] 2026-04-18 21:20:09,697 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-18 17:20:43] 2026-04-18 21:20:09,698 | INFO     | this job has now completed (state=finished)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,698 | INFO     | log transfer has been attempted: DONE
[2026-04-18 17:20:43] 2026-04-18 21:20:09,699 | INFO     | job 7101003337 has finished - writing final server update
[2026-04-18 17:20:43] 2026-04-18 21:20:09,699 | INFO     | total number of processed events: 400 (read)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,707 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7101003337/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,708 | INFO     | extracted standard info from prmon json
[2026-04-18 17:20:43] 2026-04-18 21:20:09,709 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 17:20:43] 2026-04-18 21:20:09,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 17:20:43] 2026-04-18 21:20:09,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 17:20:43] 2026-04-18 21:20:09,717 | INFO     | fitting pss+swap vs Time
[2026-04-18 17:20:43] 2026-04-18 21:20:09,717 | INFO     | sum of square deviations: 6734191380.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,721 | INFO     | sum of deviations: -6686396843.000008
[2026-04-18 17:20:43] 2026-04-18 21:20:09,721 | INFO     | mean x (centered): 0.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,721 | INFO     | mean y: 2562368.3906810037
[2026-04-18 17:20:43] 2026-04-18 21:20:09,721 | INFO     | intersect: 2562368.3906810037
[2026-04-18 17:20:43] 2026-04-18 21:20:09,722 | INFO     | chi2: 1.6089147576390177
[2026-04-18 17:20:43] 2026-04-18 21:20:09,723 | INFO     | sum of square deviations: 6378584712.5
[2026-04-18 17:20:43] 2026-04-18 21:20:09,726 | INFO     | sum of deviations: -7023483635.999997
[2026-04-18 17:20:43] 2026-04-18 21:20:09,726 | INFO     | mean x (centered): 0.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,726 | INFO     | mean y: 2562223.795620438
[2026-04-18 17:20:43] 2026-04-18 21:20:09,726 | INFO     | intersect: 2562223.795620438
[2026-04-18 17:20:43] 2026-04-18 21:20:09,727 | INFO     | chi2: 1.607982165187268
[2026-04-18 17:20:43] 2026-04-18 21:20:09,727 | INFO     | current chi2=1.607982165187268 (change=0.05796406847048338 %)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,727 | INFO     | right removable region: 273
[2026-04-18 17:20:43] 2026-04-18 21:20:09,728 | INFO     | sum of square deviations: 6378584712.5
[2026-04-18 17:20:43] 2026-04-18 21:20:09,731 | INFO     | sum of deviations: -48814893851.50003
[2026-04-18 17:20:43] 2026-04-18 21:20:09,731 | INFO     | mean x (centered): 0.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,731 | INFO     | mean y: 2580287.069343066
[2026-04-18 17:20:43] 2026-04-18 21:20:09,732 | INFO     | intersect: 2580287.069343066
[2026-04-18 17:20:43] 2026-04-18 21:20:09,732 | INFO     | chi2: 0.2248275390816156
[2026-04-18 17:20:43] 2026-04-18 21:20:09,732 | INFO     | current chi2=0.2248275390816156 (change=86.02613730689275 %)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,733 | INFO     | sum of square deviations: 6035722470.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,736 | INFO     | sum of deviations: -44920228102.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,736 | INFO     | mean x (centered): 0.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,736 | INFO     | mean y: 2578534.5464684013
[2026-04-18 17:20:43] 2026-04-18 21:20:09,736 | INFO     | intersect: 2578534.5464684013
[2026-04-18 17:20:43] 2026-04-18 21:20:09,737 | INFO     | chi2: 0.21173746680170205
[2026-04-18 17:20:43] 2026-04-18 21:20:09,737 | INFO     | current chi2=0.21173746680170205 (change=5.82227263323007 %)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,737 | INFO     | left removable region: 10
[2026-04-18 17:20:43] 2026-04-18 21:20:09,738 | INFO     | sum of square deviations: 5640782972.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,740 | INFO     | sum of deviations: -44519783597.99999
[2026-04-18 17:20:43] 2026-04-18 21:20:09,740 | INFO     | mean x (centered): 0.0
[2026-04-18 17:20:43] 2026-04-18 21:20:09,741 | INFO     | mean y: 2578720.0570342205
[2026-04-18 17:20:43] 2026-04-18 21:20:09,741 | INFO     | intersect: 2578720.0570342205
[2026-04-18 17:20:43] 2026-04-18 21:20:09,741 | INFO     | chi2: 0.20898177175780597
[2026-04-18 17:20:43] 2026-04-18 21:20:09,742 | INFO     | current memory leak: -7.89 B/s (using 263 data points, chi2=0.21)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,742 | INFO     | could have reported an average CPU frequency of 2999 MHz (13 samples)
[2026-04-18 17:20:43] 2026-04-18 21:20:09,742 | INFO     | ..............................
[2026-04-18 17:20:43] 2026-04-18 21:20:09,742 | INFO     | . Timing measurements:
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . get job = 0 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . initial setup = 5 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . payload setup = 7 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . stage-in = 0 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . payload execution = 17014 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . stage-out = 2 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,743 | INFO     | . log creation = 0 s
[2026-04-18 17:20:43] 2026-04-18 21:20:09,744 | INFO     | ..............................
[2026-04-18 17:20:43] 2026-04-18 21:20:10,147 | INFO     | 
[2026-04-18 17:20:43] 2026-04-18 21:20:10,147 | INFO     | job summary report
[2026-04-18 17:20:43] 2026-04-18 21:20:10,147 | INFO     | --------------------------------------------------
[2026-04-18 17:20:43] 2026-04-18 21:20:10,147 | INFO     | PanDA job id: 7101003337
[2026-04-18 17:20:43] 2026-04-18 21:20:10,148 | INFO     | task id: 49820244
[2026-04-18 17:20:43] 2026-04-18 21:20:10,148 | INFO     | errors: (none)
[2026-04-18 17:20:43] 2026-04-18 21:20:10,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 17:20:43] 2026-04-18 21:20:10,148 | INFO     | pilot state: finished 
[2026-04-18 17:20:43] 2026-04-18 21:20:10,149 | INFO     | transexitcode: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:10,149 | INFO     | exeerrorcode: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:10,149 | INFO     | exeerrordiag: 
[2026-04-18 17:20:43] 2026-04-18 21:20:10,149 | INFO     | exitcode: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:10,149 | INFO     | exitmsg: OK
[2026-04-18 17:20:43] 2026-04-18 21:20:10,150 | INFO     | cpuconsumptiontime: 130873 s
[2026-04-18 17:20:43] 2026-04-18 21:20:10,150 | INFO     | nevents: 400
[2026-04-18 17:20:43] 2026-04-18 21:20:10,150 | INFO     | neventsw: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:10,150 | INFO     | pid: 30290
[2026-04-18 17:20:43] 2026-04-18 21:20:10,150 | INFO     | pgrp: 30290
[2026-04-18 17:20:43] 2026-04-18 21:20:10,151 | INFO     | corecount: 8
[2026-04-18 17:20:43] 2026-04-18 21:20:10,151 | INFO     | event service: False
[2026-04-18 17:20:43] 2026-04-18 21:20:10,151 | INFO     | sizes: {0: 2281604, 1: 2283433, 11: 2283433, 17025: 2315250, 17027: 2324304, 17028: 2324442}
[2026-04-18 17:20:43] 2026-04-18 21:20:10,151 | INFO     | --------------------------------------------------
[2026-04-18 17:20:43] 2026-04-18 21:20:10,152 | INFO     | 
[2026-04-18 17:20:43] 2026-04-18 21:20:10,152 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 17:20:43] 2026-04-18 21:20:10,179 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,179 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | job 7101003337 has completed (purged errors)
[2026-04-18 17:20:43] 2026-04-18 21:20:10,182 | INFO     | overall cleanup function is called
[2026-04-18 17:20:43] 2026-04-18 21:20:11,193 | INFO     | --- collectZombieJob: --- 10, [30290]
[2026-04-18 17:20:43] 2026-04-18 21:20:11,193 | INFO     | zombie collector waiting for pid 30290
[2026-04-18 17:20:43] 2026-04-18 21:20:11,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 17:20:43] 2026-04-18 21:20:11,194 | INFO     | collected zombie processes
[2026-04-18 17:20:43] 2026-04-18 21:20:11,194 | INFO     | will attempt to kill all subprocesses of pid=30290
[2026-04-18 17:20:43] 2026-04-18 21:20:11,373 | INFO     | process IDs to be killed: [30290] (in reverse order)
[2026-04-18 17:20:43] 2026-04-18 21:20:11,454 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 17:20:43] 2026-04-18 21:20:11,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 17:20:43] 2026-04-18 21:20:11,461 | INFO     | did not find any defunct processes belonging to 30290
[2026-04-18 17:20:43] 2026-04-18 21:20:11,466 | INFO     | did not find any defunct processes belonging to 30290
[2026-04-18 17:20:43] 2026-04-18 21:20:11,466 | INFO     | Ready for new job
[2026-04-18 17:20:43] 2026-04-18 21:20:11,468 | INFO     | **************************************
[2026-04-18 17:20:43] 2026-04-18 21:20:11,469 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 17:20:43] 2026-04-18 21:20:11,469 | INFO     | **************************************
[2026-04-18 17:20:43] 2026-04-18 21:20:11,469 | INFO     | 
[2026-04-18 17:20:43] 2026-04-18 21:20:11,471 | INFO     | architecture information:
[2026-04-18 17:20:43] 2026-04-18 21:20:11,471 | INFO     | executing command: cat /etc/os-release
[2026-04-18 17:20:43] 2026-04-18 21:20:11,491 | INFO     | cat /etc/os-release:
[2026-04-18 17:20:43] NAME="CentOS Linux"
[2026-04-18 17:20:43] VERSION="7 (Core)"
[2026-04-18 17:20:43] ID="centos"
[2026-04-18 17:20:43] ID_LIKE="rhel fedora"
[2026-04-18 17:20:43] VERSION_ID="7"
[2026-04-18 17:20:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 17:20:43] ANSI_COLOR="0;31"
[2026-04-18 17:20:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 17:20:43] HOME_URL="https://www.centos.org/"
[2026-04-18 17:20:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 17:20:43] 
[2026-04-18 17:20:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 17:20:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 17:20:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 17:20:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 17:20:43] 
[2026-04-18 17:20:43] 2026-04-18 21:20:11,491 | INFO     | **************************************
[2026-04-18 17:20:43] 2026-04-18 21:20:11,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 17:20:43] 2026-04-18 21:20:12,018 | INFO     | sufficient remaining disk space (102425952256 B)
[2026-04-18 17:20:43] 2026-04-18 21:20:12,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 17:20:43] 2026-04-18 21:20:12,019 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 17:20:43] 2026-04-18 21:20:12,020 | INFO     | update_server=False
[2026-04-18 17:20:43] 2026-04-18 21:20:12,020 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 17:20:43] 2026-04-18 21:20:12,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 17:20:43] 2026-04-18 21:20:12,816 | WARNING  | process 30290 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 17:20:43] 2026-04-18 21:20:12,877 | INFO     | all data control threads have been joined
[2026-04-18 17:20:43] 2026-04-18 21:20:12,910 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 17:20:43] 2026-04-18 21:20:13,015 | INFO     | number of running child processes to parent process 30290: 1
[2026-04-18 17:20:43] 2026-04-18 21:20:13,015 | INFO     | maximum number of monitored processes: 6
[2026-04-18 17:20:43] 2026-04-18 21:20:13,015 | INFO     | aborting job monitoring since job object (job id=7101003337) has expired
[2026-04-18 17:20:43] 2026-04-18 21:20:13,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:20:43] 2026-04-18 21:20:13,015 | INFO     | will abort loop
[2026-04-18 17:20:43] 2026-04-18 21:20:13,026 | INFO     | [job] retrieve thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,056 | INFO     | [payload] validate_post thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,063 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,129 | INFO     | [payload] failed_post thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,178 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,190 | INFO     | all job control threads have been joined
[2026-04-18 17:20:43] 2026-04-18 21:20:13,367 | INFO     | [data] copytool_in thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,491 | INFO     | all payload control threads have been joined
[2026-04-18 17:20:43] 2026-04-18 21:20:13,708 | INFO     | [job] validate thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:13,883 | INFO     | [data] control thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,020 | INFO     | [job] job monitor thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,176 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,196 | INFO     | [job] control thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,351 | INFO     | [data] copytool_out thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,497 | INFO     | [payload] control thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,515 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:14,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:20:43] 2026-04-18 21:20:15,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 17:20:43] 2026-04-18 21:20:15,845 | INFO     | [job] queue monitor thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:19,441 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 17:20:43] 2026-04-18 21:20:37,641 | INFO     | [monitor] cgroup control has ended
[2026-04-18 17:20:43] 2026-04-18 21:20:38,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644600067904)>', '<ExcThread(monitor, started 140643871487744)>']
[2026-04-18 17:20:43] 2026-04-18 21:20:42,632 | INFO     | PID=25397 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 17:20:43] 2026-04-18 21:20:42,633 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 17:20:43] 2026-04-18 21:20:42,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 17:20:43] 2026-04-18 21:20:42,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 17:20:43] 2026-04-18 21:20:42,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 17:20:43] 2026-04-18 21:20:42,634 | INFO     | [monitor] control thread has ended
[2026-04-18 17:20:43] 2026-04-18 21:20:43,673 | INFO     | all workflow threads have been joined
[2026-04-18 17:20:43] 2026-04-18 21:20:43,673 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 17:20:43] 2026-04-18 21:20:43,674 | INFO     | traces error code: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:43,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 17:20:43] 2026-04-18 21:20:43,799 [wrapper] ==== pilot stdout END ====
[2026-04-18 17:20:43] 2026-04-18 21:20:43,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 17:20:43] 2026-04-18 21:20:43,803 [wrapper] pilotpid: 25397
[2026-04-18 17:20:43] 2026-04-18 21:20:43,805 [wrapper] Pilot exit status: 0
[2026-04-18 17:20:43] 2026-04-18 21:20:43,818 [wrapper] pandaids: 7101003337
[2026-04-18 17:20:43] 2026-04-18 21:20:43,852 [wrapper] cleanup supervisor_pilot 27695 25398
[2026-04-18 17:20:43] 2026-04-18 21:20:43,856 [wrapper] Test setup, not cleaning
[2026-04-18 17:20:43] 2026-04-18 21:20:43,860 [wrapper] apfmon messages muted
[2026-04-18 17:20:43] 2026-04-18 21:20:43,864 [wrapper] ==== wrapper stdout END ====
[2026-04-18 17:20:43] 2026-04-18 21:20:43,866 [wrapper] ==== wrapper stderr END ====
[2026-04-18 17:20:43]  *** Error codes and diagnostics ***
[2026-04-18 17:20:43]     "exeErrorCode": 0,
[2026-04-18 17:20:43]     "pilotErrorCode": 0,
[2026-04-18 17:20:43]  *** Listing of results directory ***
[2026-04-18 17:20:43] total 2462460
[2026-04-18 17:20:43] -rwx------ 1 boincer umatlas      36322 Apr 18 08:40 runpilot2-wrapper.sh
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas     644190 Apr 18 08:50 pilot3.tar.gz
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas       5094 Apr 18 08:54 queuedata.json
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas        100 Apr 18 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 17:20:43] -rwxr-xr-x 1 boincer umatlas       7986 Apr 18 12:35 run_atlas
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas        105 Apr 18 12:35 job.xml
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas 2232826562 Apr 18 12:35 EVNT.49820242._000010.pool.root.1
[2026-04-18 17:20:43] drwxrwx--x 2 boincer umatlas       4096 Apr 18 12:35 shared
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas     656906 Apr 18 12:35 input.tar.gz
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas      15665 Apr 18 12:35 start_atlas.sh
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas          0 Apr 18 12:35 boinc_lockfile
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas       2550 Apr 18 12:35 pandaJob.out
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas         57 Apr 18 12:35 setup.sh.local
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas     997676 Apr 18 12:36 agis_schedconf.cvmfs.json
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas        438 Apr 18 12:36 workernode_map.json
[2026-04-18 17:20:43] drwx------ 5 boincer umatlas       4096 Apr 18 12:36 pilot3
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas       5952 Apr 18 17:11 init_data.xml
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas  280448835 Apr 18 17:19 HITS.49820244._001021.pool.root.1
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas        490 Apr 18 17:19 boinc_task_state.xml
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas       1048 Apr 18 17:20 memory_monitor_summary.json
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas    1512404 Apr 18 17:20 agis_ddmendpoints.agis.ALL.json
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas     571884 Apr 18 17:20 log.49820244._001021.job.log.tgz.1
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas       6417 Apr 18 17:20 heartbeat_new.json
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas       6308 Apr 18 17:20 heartbeat.json
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas       8192 Apr 18 17:20 boinc_mmap_file
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas         29 Apr 18 17:20 wrapper_checkpoint.txt
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas         95 Apr 18 17:20 pilot_heartbeat.json
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas       5259 Apr 18 17:20 pilotlog.txt
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas    1536658 Apr 18 17:20 log.49820244._001021.job.log.1
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas        357 Apr 18 17:20 output.list
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas        410 Apr 18 17:20 runtime_log
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas    2129920 Apr 18 17:20 result.tar.gz
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas       8954 Apr 18 17:20 runtime_log.err
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas        660 Apr 18 17:20 7bb9035a23e1.diag
[2026-04-18 17:20:43] -rw-r--r-- 1 boincer umatlas      21212 Apr 18 17:20 stderr.txt
[2026-04-18 17:20:43] HITS file was successfully produced:
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas 280448835 Apr 18 17:19 shared/HITS.pool.root.1
[2026-04-18 17:20:43]  *** Contents of shared directory: ***
[2026-04-18 17:20:43] total 2457120
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas 2232826562 Apr 18 12:35 ATLAS.root_0
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas     656906 Apr 18 12:35 input.tar.gz
[2026-04-18 17:20:43] -rw-r--r-- 2 boincer umatlas      15665 Apr 18 12:35 start_atlas.sh
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas  280448835 Apr 18 17:19 HITS.pool.root.1
[2026-04-18 17:20:43] -rw------- 1 boincer umatlas    2129920 Apr 18 17:20 result.tar.gz
17:20:45 (21649): run_atlas exited; CPU time 131217.070424
17:20:45 (21649): called boinc_finish(0)

</stderr_txt>
]]>

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