Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:04:33 (3258530): wrapper (7.7.26015): starting
00:04:33 (3258530): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 00:04:33] Arguments: --nthreads 4
[2026-04-21 00:04:33] Threads: 4
[2026-04-21 00:04:33] Checking for CVMFS
[2026-04-21 00:04:33] No cvmfs_config command found, will try listing directly
[2026-04-21 00:04:33] CVMFS is ok
[2026-04-21 00:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 00:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 00:04:33] Further information can be found at the LHC@home message board.
[2026-04-21 00:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 00:04:33] Checking for apptainer binary...
[2026-04-21 00:04:33] which: no apptainer in ((null))
[2026-04-21 00:04:33] apptainer is not installed, using version from CVMFS
[2026-04-21 00:04:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 00:04:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-21 00:04:34] apptainer works
[2026-04-21 00:04:34] Set ATHENA_PROC_NUMBER=4
[2026-04-21 00:04:34] Set ATHENA_CORE_NUMBER=4
[2026-04-21 00:04:34] Starting ATLAS job with PandaID=7101003120
[2026-04-21 00:04:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 04:50:32]  *** The last 200 lines of the pilot log: ***
[2026-04-21 04:50:32] 2026-04-21 02:49:34,755 | INFO     | job 7101003120 has finished - writing final server update
[2026-04-21 04:50:32] 2026-04-21 02:49:34,755 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9242/.job.ad'
[2026-04-21 04:50:32] 2026-04-21 02:49:34,755 | INFO     | total number of processed events: 400 (read)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,780 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/PanDA_Pilot-7101003120/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,781 | INFO     | extracted standard info from prmon json
[2026-04-21 04:50:32] 2026-04-21 02:49:34,781 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 04:50:32] 2026-04-21 02:49:34,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 04:50:32] 2026-04-21 02:49:34,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 04:50:32] 2026-04-21 02:49:34,786 | INFO     | fitting pss+swap vs Time
[2026-04-21 04:50:32] 2026-04-21 02:49:34,786 | INFO     | sum of square deviations: 6806862510.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,789 | INFO     | sum of deviations: 34803600294.50001
[2026-04-21 04:50:32] 2026-04-21 02:49:34,789 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,789 | INFO     | mean y: 2340381.6392857144
[2026-04-21 04:50:32] 2026-04-21 02:49:34,789 | INFO     | intersect: 2340381.6392857144
[2026-04-21 04:50:32] 2026-04-21 02:49:34,789 | INFO     | chi2: 2.153640541514986
[2026-04-21 04:50:32] 2026-04-21 02:49:34,790 | INFO     | sum of square deviations: 6448679050.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,792 | INFO     | sum of deviations: 51373060337.00001
[2026-04-21 04:50:32] 2026-04-21 02:49:34,792 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,792 | INFO     | mean y: 2347327.0254545454
[2026-04-21 04:50:32] 2026-04-21 02:49:34,792 | INFO     | intersect: 2347327.0254545454
[2026-04-21 04:50:32] 2026-04-21 02:49:34,793 | INFO     | chi2: 1.368575962693485
[2026-04-21 04:50:32] 2026-04-21 02:49:34,793 | INFO     | current chi2=1.368575962693485 (change=36.45290677288441 %)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,793 | INFO     | sum of square deviations: 6103286527.5
[2026-04-21 04:50:32] 2026-04-21 02:49:34,795 | INFO     | sum of deviations: 49995351181.00001
[2026-04-21 04:50:32] 2026-04-21 02:49:34,795 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,796 | INFO     | mean y: 2346719.066666667
[2026-04-21 04:50:32] 2026-04-21 02:49:34,796 | INFO     | intersect: 2346719.066666667
[2026-04-21 04:50:32] 2026-04-21 02:49:34,796 | INFO     | chi2: 1.3688611373075674
[2026-04-21 04:50:32] 2026-04-21 02:49:34,796 | INFO     | current chi2=1.3688611373075674 (change=-0.020837324478587584 %)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,796 | INFO     | right removable region: 269
[2026-04-21 04:50:32] 2026-04-21 02:49:34,797 | INFO     | sum of square deviations: 6448679050.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,799 | INFO     | sum of deviations: -3706038957.000002
[2026-04-21 04:50:32] 2026-04-21 02:49:34,799 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,799 | INFO     | mean y: 2356640.4727272727
[2026-04-21 04:50:32] 2026-04-21 02:49:34,799 | INFO     | intersect: 2356640.4727272727
[2026-04-21 04:50:32] 2026-04-21 02:49:34,800 | INFO     | chi2: 0.8099970476506909
[2026-04-21 04:50:32] 2026-04-21 02:49:34,800 | INFO     | current chi2=0.8099970476506909 (change=62.389403800835964 %)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,800 | INFO     | sum of square deviations: 6103286527.5
[2026-04-21 04:50:32] 2026-04-21 02:49:34,802 | INFO     | sum of deviations: -7058927991.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,802 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,802 | INFO     | mean y: 2358112.2296296298
[2026-04-21 04:50:32] 2026-04-21 02:49:34,802 | INFO     | intersect: 2358112.2296296298
[2026-04-21 04:50:32] 2026-04-21 02:49:34,803 | INFO     | chi2: 0.8023514060289759
[2026-04-21 04:50:32] 2026-04-21 02:49:34,803 | INFO     | current chi2=0.8023514060289759 (change=0.9439098134851668 %)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,803 | INFO     | left removable region: 10
[2026-04-21 04:50:32] 2026-04-21 02:49:34,804 | INFO     | sum of square deviations: 5387301010.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | sum of deviations: 9000174300.999998
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | mean x (centered): 0.0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | mean y: 2365340.8416988417
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | intersect: 2365340.8416988417
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | chi2: 0.0037955081206285826
[2026-04-21 04:50:32] 2026-04-21 02:49:34,806 | INFO     | current memory leak: 1.67 B/s (using 259 data points, chi2=0.00)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,807 | INFO     | could have reported an average CPU frequency of 2717 MHz (13 samples)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,807 | INFO     | ..............................
[2026-04-21 04:50:32] 2026-04-21 02:49:34,807 | INFO     | . Timing measurements:
[2026-04-21 04:50:32] 2026-04-21 02:49:34,807 | INFO     | . get job = 0 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . initial setup = 8 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . payload setup = 15 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . stage-in = 0 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . payload execution = 17041 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . stage-out = 1 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | . log creation = 0 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,808 | INFO     | ..............................
[2026-04-21 04:50:32] 2026-04-21 02:49:34,902 | INFO     | 
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | job summary report
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | --------------------------------------------------
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | PanDA job id: 7101003120
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | task id: 49820244
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | errors: (none)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 04:50:32] 2026-04-21 02:49:34,903 | INFO     | pilot state: finished 
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | transexitcode: 0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | exeerrorcode: 0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | exeerrordiag: 
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | exitcode: 0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | exitmsg: OK
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | cpuconsumptiontime: 65454 s
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | nevents: 400
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | neventsw: 0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | pid: 3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | pgrp: 3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | corecount: 4
[2026-04-21 04:50:32] 2026-04-21 02:49:34,904 | INFO     | event service: False
[2026-04-21 04:50:32] 2026-04-21 02:49:34,905 | INFO     | sizes: {0: 2281782, 1: 2283412, 11: 2283440, 17060: 2316107, 17061: 2316106, 17063: 2325182, 17064: 2325366, 17065: 2325560}
[2026-04-21 04:50:32] 2026-04-21 02:49:34,905 | INFO     | --------------------------------------------------
[2026-04-21 04:50:32] 2026-04-21 02:49:34,905 | INFO     | 
[2026-04-21 04:50:32] 2026-04-21 02:49:34,905 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/0
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 04:50:32] 2026-04-21 02:49:34,938 | INFO     | job 7101003120 has completed (purged errors)
[2026-04-21 04:50:32] 2026-04-21 02:49:34,938 | INFO     | overall cleanup function is called
[2026-04-21 04:50:32] 2026-04-21 02:49:35,950 | INFO     | --- collectZombieJob: --- 10, [3274799]
[2026-04-21 04:50:32] 2026-04-21 02:49:35,950 | INFO     | zombie collector waiting for pid 3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:35,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 04:50:32] 2026-04-21 02:49:35,951 | INFO     | collected zombie processes
[2026-04-21 04:50:32] 2026-04-21 02:49:35,951 | INFO     | will attempt to kill all subprocesses of pid=3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:36,608 | INFO     | PID=3263190 has CPU usage=25.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 04:50:32] 2026-04-21 02:49:36,609 | INFO     | .. there are 21 such processes running
[2026-04-21 04:50:32] 2026-04-21 02:49:37,162 | INFO     | process IDs to be killed: [3274799] (in reverse order)
[2026-04-21 04:50:32] 2026-04-21 02:49:37,489 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 04:50:32] 2026-04-21 02:49:37,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 04:50:32] 2026-04-21 02:49:37,520 | INFO     | did not find any defunct processes belonging to 3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:37,548 | INFO     | did not find any defunct processes belonging to 3274799
[2026-04-21 04:50:32] 2026-04-21 02:49:37,548 | INFO     | Ready for new job
[2026-04-21 04:50:32] 2026-04-21 02:49:37,550 | INFO     | **************************************
[2026-04-21 04:50:32] 2026-04-21 02:49:37,550 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 04:50:32] 2026-04-21 02:49:37,550 | INFO     | **************************************
[2026-04-21 04:50:32] 2026-04-21 02:49:37,551 | INFO     | 
[2026-04-21 04:50:32] 2026-04-21 02:49:37,559 | INFO     | architecture information:
[2026-04-21 04:50:32] 2026-04-21 02:49:37,559 | INFO     | executing command: cat /etc/os-release
[2026-04-21 04:50:32] 2026-04-21 02:49:37,582 | INFO     | cat /etc/os-release:
[2026-04-21 04:50:32] NAME="CentOS Linux"
[2026-04-21 04:50:32] VERSION="7 (Core)"
[2026-04-21 04:50:32] ID="centos"
[2026-04-21 04:50:32] ID_LIKE="rhel fedora"
[2026-04-21 04:50:32] VERSION_ID="7"
[2026-04-21 04:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 04:50:32] ANSI_COLOR="0;31"
[2026-04-21 04:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 04:50:32] HOME_URL="https://www.centos.org/"
[2026-04-21 04:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 04:50:32] 
[2026-04-21 04:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 04:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 04:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 04:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 04:50:32] 
[2026-04-21 04:50:32] 2026-04-21 02:49:37,582 | INFO     | **************************************
[2026-04-21 04:50:32] 2026-04-21 02:49:38,085 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/0
[2026-04-21 04:50:32] 2026-04-21 02:49:38,115 | INFO     | sufficient remaining disk space (177896161280 B)
[2026-04-21 04:50:32] 2026-04-21 02:49:38,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 04:50:32] 2026-04-21 02:49:38,116 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 04:50:32] 2026-04-21 02:49:38,116 | INFO     | update_server=False
[2026-04-21 04:50:32] 2026-04-21 02:49:38,117 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 04:50:32] 2026-04-21 02:49:38,183 | INFO     | all job control threads have been joined
[2026-04-21 04:50:32] 2026-04-21 02:49:38,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 04:50:32] 2026-04-21 02:49:38,498 | INFO     | all payload control threads have been joined
[2026-04-21 04:50:32] 2026-04-21 02:49:38,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 04:50:32] 2026-04-21 02:49:38,573 | INFO     | aborting loop
[2026-04-21 04:50:32] 2026-04-21 02:49:39,121 | INFO     | [job] retrieve thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,189 | INFO     | [job] control thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,200 | INFO     | all data control threads have been joined
[2026-04-21 04:50:32] 2026-04-21 02:49:39,256 | INFO     | [job] validate thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,275 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,365 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,462 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,499 | INFO     | [payload] control thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,578 | INFO     | [job] job monitor thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 04:50:32] 2026-04-21 02:49:39,763 | INFO     | [payload] validate_post thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:39,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 04:50:32] 2026-04-21 02:49:40,205 | INFO     | [data] control thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:40,206 | INFO     | [data] copytool_out thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:40,209 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:40,315 | INFO     | [data] copytool_in thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:40,419 | INFO     | [payload] failed_post thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:40,917 | INFO     | [job] queue monitor thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:43,712 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 04:50:32] 2026-04-21 02:49:49,317 [wrapper] supervise_pilot (15 min periods counter: 20)
[2026-04-21 04:50:32] 2026-04-21 02:50:09,607 | INFO     | PID=3263190 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 04:50:32] 2026-04-21 02:50:09,608 | INFO     | .. there are 21 such processes running
[2026-04-21 04:50:32] 2026-04-21 02:50:09,609 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 04:50:32] 2026-04-21 02:50:09,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 04:50:32] 2026-04-21 02:50:09,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 04:50:32] 2026-04-21 02:50:26,573 | INFO     | [monitor] cgroup control has ended
[2026-04-21 04:50:32] 2026-04-21 02:50:26,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22723659839296)>', '<ExcThread(monitor, started 22723419186944)>']
[2026-04-21 04:50:32] 2026-04-21 02:50:27,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 04:50:32] 2026-04-21 02:50:27,700 | INFO     | [monitor] control thread has ended
[2026-04-21 04:50:32] 2026-04-21 02:50:31,887 | INFO     | all workflow threads have been joined
[2026-04-21 04:50:32] 2026-04-21 02:50:31,887 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 04:50:32] 2026-04-21 02:50:31,887 | INFO     | traces error code: 0
[2026-04-21 04:50:32] 2026-04-21 02:50:31,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 04:50:32] 2026-04-21 02:50:32,035 [wrapper] ==== pilot stdout END ====
[2026-04-21 04:50:32] 2026-04-21 02:50:32,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 04:50:32] 2026-04-21 02:50:32,043 [wrapper] pilotpid: 3263190
[2026-04-21 04:50:32] 2026-04-21 02:50:32,047 [wrapper] Pilot exit status: 0
[2026-04-21 04:50:32] 2026-04-21 02:50:32,064 [wrapper] pandaids: 7101003120
[2026-04-21 04:50:32] 2026-04-21 02:50:32,276 [wrapper] cleanup supervisor_pilot 3855776 3263191
[2026-04-21 04:50:32] 2026-04-21 02:50:32,280 [wrapper] Test setup, not cleaning
[2026-04-21 04:50:32] 2026-04-21 02:50:32,285 [wrapper] apfmon messages muted
[2026-04-21 04:50:32] 2026-04-21 02:50:32,288 [wrapper] ==== wrapper stdout END ====
[2026-04-21 04:50:32] 2026-04-21 02:50:32,292 [wrapper] ==== wrapper stderr END ====
[2026-04-21 04:50:32]  *** Error codes and diagnostics ***
[2026-04-21 04:50:32]     "exeErrorCode": 0,
[2026-04-21 04:50:32]     "pilotErrorCode": 0,
[2026-04-21 04:50:32]  *** Listing of results directory ***
[2026-04-21 04:50:32] total 2451780
[2026-04-21 04:50:32] -rwx------. 1 boinc boinc      36322 Apr 18 14:40 runpilot2-wrapper.sh
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc     644190 Apr 18 14:50 pilot3.tar.gz
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc       5094 Apr 18 14:54 queuedata.json
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc        100 Apr 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 04:50:32] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 00:04 run_atlas
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc        105 Apr 21 00:04 job.xml
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc       6538 Apr 21 00:04 init_data.xml
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc 2232780683 Apr 21 00:04 EVNT.49820242._000008.pool.root.1
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc     656905 Apr 21 00:04 input.tar.gz
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc      15665 Apr 21 00:04 start_atlas.sh
[2026-04-21 04:50:32] drwxrwx--x. 2 boinc boinc       4096 Apr 21 00:04 shared
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc          0 Apr 21 00:04 boinc_lockfile
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc       2548 Apr 21 00:04 pandaJob.out
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc     997486 Apr 21 00:04 agis_schedconf.cvmfs.json
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc        443 Apr 21 00:04 workernode_map.json
[2026-04-21 04:50:32] drwx------. 5 boinc boinc       4096 Apr 21 00:04 pilot3
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc  269704314 Apr 21 04:48 HITS.49820244._000804.pool.root.1
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc        489 Apr 21 04:49 boinc_task_state.xml
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc       1028 Apr 21 04:49 memory_monitor_summary.json
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc    1512404 Apr 21 04:49 agis_ddmendpoints.agis.ALL.json
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc     464777 Apr 21 04:49 log.49820244._000804.job.log.tgz.1
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc       6369 Apr 21 04:49 heartbeat_new.json
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc       6260 Apr 21 04:49 heartbeat.json
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc         95 Apr 21 04:50 pilot_heartbeat.json
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc         28 Apr 21 04:50 wrapper_checkpoint.txt
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc       8192 Apr 21 04:50 boinc_mmap_file
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc       4829 Apr 21 04:50 pilotlog.txt
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc    1571628 Apr 21 04:50 log.49820244._000804.job.log.1
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc        357 Apr 21 04:50 output.list
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc        410 Apr 21 04:50 runtime_log
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc    2058240 Apr 21 04:50 result.tar.gz
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc       8827 Apr 21 04:50 runtime_log.err
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc        666 Apr 21 04:50 7b9fe7bc4c8d.diag
[2026-04-21 04:50:32] -rw-r--r--. 1 boinc boinc      20939 Apr 21 04:50 stderr.txt
[2026-04-21 04:50:32] HITS file was successfully produced:
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc 269704314 Apr 21 04:48 shared/HITS.pool.root.1
[2026-04-21 04:50:32]  *** Contents of shared directory: ***
[2026-04-21 04:50:32] total 2446516
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc 2232780683 Apr 21 00:04 ATLAS.root_0
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc     656905 Apr 21 00:04 input.tar.gz
[2026-04-21 04:50:32] -rw-r--r--. 2 boinc boinc      15665 Apr 21 00:04 start_atlas.sh
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc  269704314 Apr 21 04:48 HITS.pool.root.1
[2026-04-21 04:50:32] -rw-------. 1 boinc boinc    2058240 Apr 21 04:50 result.tar.gz
04:50:33 (3258530): run_atlas exited; CPU time 66603.522482
04:50:33 (3258530): called boinc_finish(0)

</stderr_txt>
]]>

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