Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:25 (3385535): wrapper (7.7.26015): starting
00:41:25 (3385535): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 00:41:25] Arguments: --nthreads 4
[2026-04-21 00:41:25] Threads: 4
[2026-04-21 00:41:25] Checking for CVMFS
[2026-04-21 00:41:25] No cvmfs_config command found, will try listing directly
[2026-04-21 00:41:25] CVMFS is ok
[2026-04-21 00:41:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 00:41:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 00:41:25] Further information can be found at the LHC@home message board.
[2026-04-21 00:41:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 00:41:25] Checking for apptainer binary...
[2026-04-21 00:41:25] which: no apptainer in ((null))
[2026-04-21 00:41:25] apptainer is not installed, using version from CVMFS
[2026-04-21 00:41:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 00:41:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-21 00:41:26] apptainer works
[2026-04-21 00:41:26] Set ATHENA_PROC_NUMBER=4
[2026-04-21 00:41:26] Set ATHENA_CORE_NUMBER=4
[2026-04-21 00:41:26] Starting ATLAS job with PandaID=7101016149
[2026-04-21 00:41:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 05:32:24]  *** The last 200 lines of the pilot log: ***
[2026-04-21 05:32:24] 2026-04-21 03:31:50,196 | INFO     | using path: /var/lib/boinc/var/slot76/slots/0/PanDA_Pilot-7101016149/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,196 | INFO     | extracted standard info from prmon json
[2026-04-21 05:32:24] 2026-04-21 03:31:50,196 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 05:32:24] 2026-04-21 03:31:50,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 05:32:24] 2026-04-21 03:31:50,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 05:32:24] 2026-04-21 03:31:50,203 | INFO     | fitting pss+swap vs Time
[2026-04-21 05:32:24] 2026-04-21 03:31:50,203 | INFO     | sum of square deviations: 7178069470.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,206 | INFO     | sum of deviations: 11000218754.999996
[2026-04-21 05:32:24] 2026-04-21 03:31:50,206 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,206 | INFO     | mean y: 2353819.1649122806
[2026-04-21 05:32:24] 2026-04-21 03:31:50,206 | INFO     | intersect: 2353819.1649122806
[2026-04-21 05:32:24] 2026-04-21 03:31:50,206 | INFO     | chi2: 2.229170664199471
[2026-04-21 05:32:24] 2026-04-21 03:31:50,207 | INFO     | sum of square deviations: 6806862510.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,209 | INFO     | sum of deviations: 29455133958.5
[2026-04-21 05:32:24] 2026-04-21 03:31:50,209 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,209 | INFO     | mean y: 2361291.2464285716
[2026-04-21 05:32:24] 2026-04-21 03:31:50,210 | INFO     | intersect: 2361291.2464285716
[2026-04-21 05:32:24] 2026-04-21 03:31:50,210 | INFO     | chi2: 1.3764705463896527
[2026-04-21 05:32:24] 2026-04-21 03:31:50,210 | INFO     | current chi2=1.3764705463896527 (change=38.25189930516315 %)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,210 | INFO     | sum of square deviations: 6448679050.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | sum of deviations: 28826737060.00001
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | mean y: 2361023.672727273
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | intersect: 2361023.672727273
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | chi2: 1.3769338863966316
[2026-04-21 05:32:24] 2026-04-21 03:31:50,213 | INFO     | current chi2=1.3769338863966316 (change=-0.03366145452179792 %)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,214 | INFO     | right removable region: 274
[2026-04-21 05:32:24] 2026-04-21 03:31:50,214 | INFO     | sum of square deviations: 6806862510.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,216 | INFO     | sum of deviations: -26961995241.999996
[2026-04-21 05:32:24] 2026-04-21 03:31:50,216 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,216 | INFO     | mean y: 2369276.5142857144
[2026-04-21 05:32:24] 2026-04-21 03:31:50,216 | INFO     | intersect: 2369276.5142857144
[2026-04-21 05:32:24] 2026-04-21 03:31:50,217 | INFO     | chi2: 0.8869448734276805
[2026-04-21 05:32:24] 2026-04-21 03:31:50,217 | INFO     | current chi2=0.8869448734276805 (change=60.21189011357298 %)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,217 | INFO     | sum of square deviations: 6448679050.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | sum of deviations: -26286996997.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | mean y: 2368980.9127272726
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | intersect: 2368980.9127272726
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | chi2: 0.8836468010552622
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | current chi2=0.8836468010552622 (change=0.37184637639006785 %)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,220 | INFO     | left removable region: 10
[2026-04-21 05:32:24] 2026-04-21 03:31:50,221 | INFO     | sum of square deviations: 5705372090.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,223 | INFO     | sum of deviations: -7784106300.000001
[2026-04-21 05:32:24] 2026-04-21 03:31:50,223 | INFO     | mean x (centered): 0.0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,223 | INFO     | mean y: 2377033.628787879
[2026-04-21 05:32:24] 2026-04-21 03:31:50,223 | INFO     | intersect: 2377033.628787879
[2026-04-21 05:32:24] 2026-04-21 03:31:50,224 | INFO     | chi2: 0.014556177961268695
[2026-04-21 05:32:24] 2026-04-21 03:31:50,224 | INFO     | current memory leak: -1.36 B/s (using 264 data points, chi2=0.01)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,224 | INFO     | could have reported an average CPU frequency of 2718 MHz (13 samples)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | ..............................
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . Timing measurements:
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . get job = 0 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . initial setup = 8 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . payload setup = 15 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . stage-in = 0 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . payload execution = 17367 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . stage-out = 1 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | . log creation = 0 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,225 | INFO     | ..............................
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | 
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | job summary report
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | --------------------------------------------------
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | PanDA job id: 7101016149
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | task id: 49820375
[2026-04-21 05:32:24] 2026-04-21 03:31:50,323 | INFO     | errors: (none)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | pilot state: finished 
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | transexitcode: 0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | exeerrorcode: 0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | exeerrordiag: 
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | exitcode: 0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | exitmsg: OK
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | cpuconsumptiontime: 66955 s
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | nevents: 400
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | neventsw: 0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | pid: 3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:50,324 | INFO     | pgrp: 3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | corecount: 4
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | event service: False
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | sizes: {0: 2281593, 1: 2283478, 12: 2283478, 17387: 2316518, 17388: 2325732}
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | --------------------------------------------------
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | 
[2026-04-21 05:32:24] 2026-04-21 03:31:50,325 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/0
[2026-04-21 05:32:24] 2026-04-21 03:31:50,355 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 05:32:24] 2026-04-21 03:31:50,357 | INFO     | job 7101016149 has completed (purged errors)
[2026-04-21 05:32:24] 2026-04-21 03:31:50,358 | INFO     | overall cleanup function is called
[2026-04-21 05:32:24] 2026-04-21 03:31:51,370 | INFO     | --- collectZombieJob: --- 10, [3395176]
[2026-04-21 05:32:24] 2026-04-21 03:31:51,370 | INFO     | zombie collector waiting for pid 3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:51,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 05:32:24] 2026-04-21 03:31:51,370 | INFO     | collected zombie processes
[2026-04-21 05:32:24] 2026-04-21 03:31:51,371 | INFO     | will attempt to kill all subprocesses of pid=3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:52,194 | INFO     | process IDs to be killed: [3395176] (in reverse order)
[2026-04-21 05:32:24] 2026-04-21 03:31:52,505 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 05:32:24] 2026-04-21 03:31:52,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 05:32:24] 2026-04-21 03:31:52,536 | INFO     | did not find any defunct processes belonging to 3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:52,564 | INFO     | did not find any defunct processes belonging to 3395176
[2026-04-21 05:32:24] 2026-04-21 03:31:52,564 | INFO     | Ready for new job
[2026-04-21 05:32:24] 2026-04-21 03:31:52,567 | INFO     | **************************************
[2026-04-21 05:32:24] 2026-04-21 03:31:52,567 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 05:32:24] 2026-04-21 03:31:52,567 | INFO     | **************************************
[2026-04-21 05:32:24] 2026-04-21 03:31:52,567 | INFO     | 
[2026-04-21 05:32:24] 2026-04-21 03:31:52,575 | INFO     | architecture information:
[2026-04-21 05:32:24] 2026-04-21 03:31:52,576 | INFO     | executing command: cat /etc/os-release
[2026-04-21 05:32:24] 2026-04-21 03:31:52,597 | INFO     | cat /etc/os-release:
[2026-04-21 05:32:24] NAME="CentOS Linux"
[2026-04-21 05:32:24] VERSION="7 (Core)"
[2026-04-21 05:32:24] ID="centos"
[2026-04-21 05:32:24] ID_LIKE="rhel fedora"
[2026-04-21 05:32:24] VERSION_ID="7"
[2026-04-21 05:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 05:32:24] ANSI_COLOR="0;31"
[2026-04-21 05:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 05:32:24] HOME_URL="https://www.centos.org/"
[2026-04-21 05:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 05:32:24] 
[2026-04-21 05:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 05:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 05:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 05:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 05:32:24] 
[2026-04-21 05:32:24] 2026-04-21 03:31:52,597 | INFO     | **************************************
[2026-04-21 05:32:24] 2026-04-21 03:31:53,100 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/0
[2026-04-21 05:32:24] 2026-04-21 03:31:53,125 | INFO     | sufficient remaining disk space (182301229056 B)
[2026-04-21 05:32:24] 2026-04-21 03:31:53,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 05:32:24] 2026-04-21 03:31:53,126 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 05:32:24] 2026-04-21 03:31:53,126 | INFO     | update_server=False
[2026-04-21 05:32:24] 2026-04-21 03:31:53,126 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 05:32:24] 2026-04-21 03:31:53,127 | INFO     | job.realtimelogging is not enabled
[2026-04-21 05:32:24] 2026-04-21 03:31:53,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 05:32:24] 2026-04-21 03:31:53,767 | INFO     | all data control threads have been joined
[2026-04-21 05:32:24] 2026-04-21 03:31:54,132 | INFO     | [job] retrieve thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,151 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,171 | WARNING  | process 3395176 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 05:32:24] 2026-04-21 03:31:54,234 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,289 | INFO     | all job control threads have been joined
[2026-04-21 05:32:24] 2026-04-21 03:31:54,417 | INFO     | [data] copytool_in thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,441 | INFO     | all payload control threads have been joined
[2026-04-21 05:32:24] 2026-04-21 03:31:54,613 | INFO     | [payload] validate_post thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:54,680 | INFO     | using path: /var/lib/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 05:32:24] 2026-04-21 03:31:54,773 | INFO     | [data] control thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,115 | INFO     | [job] validate thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,133 | INFO     | [data] copytool_out thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,294 | INFO     | [job] control thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 05:32:24] 2026-04-21 03:31:55,442 | INFO     | [payload] control thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,469 | INFO     | number of running child processes to parent process 3395176: 1
[2026-04-21 05:32:24] 2026-04-21 03:31:55,469 | INFO     | maximum number of monitored processes: 6
[2026-04-21 05:32:24] 2026-04-21 03:31:55,470 | INFO     | aborting job monitoring since job object (job id=7101016149) has expired
[2026-04-21 05:32:24] 2026-04-21 03:31:55,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 05:32:24] 2026-04-21 03:31:55,470 | INFO     | will abort loop
[2026-04-21 05:32:24] 2026-04-21 03:31:55,631 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:55,671 | INFO     | [payload] failed_post thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:56,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 05:32:24] 2026-04-21 03:31:56,338 | INFO     | [job] queue monitor thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:31:56,475 | INFO     | [job] job monitor thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:32:00,164 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 05:32:24] 2026-04-21 03:32:18,544 | INFO     | [monitor] cgroup control has ended
[2026-04-21 05:32:24] 2026-04-21 03:32:18,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23223680943936)>', '<ExcThread(monitor, started 23223438939904)>']
[2026-04-21 05:32:24] 2026-04-21 03:32:22,540 | INFO     | PID=3389845 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 05:32:24] 2026-04-21 03:32:22,540 | INFO     | .. there are 20 such processes running
[2026-04-21 05:32:24] 2026-04-21 03:32:22,542 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 05:32:24] 2026-04-21 03:32:22,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 05:32:24] 2026-04-21 03:32:22,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 05:32:24] 2026-04-21 03:32:22,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 05:32:24] 2026-04-21 03:32:22,542 | INFO     | [monitor] control thread has ended
[2026-04-21 05:32:24] 2026-04-21 03:32:23,804 | INFO     | all workflow threads have been joined
[2026-04-21 05:32:24] 2026-04-21 03:32:23,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 05:32:24] 2026-04-21 03:32:23,806 | INFO     | traces error code: 0
[2026-04-21 05:32:24] 2026-04-21 03:32:23,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 05:32:24] 2026-04-21 03:32:23,953 [wrapper] ==== pilot stdout END ====
[2026-04-21 05:32:24] 2026-04-21 03:32:23,961 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 05:32:24] 2026-04-21 03:32:23,965 [wrapper] pilotpid: 3389845
[2026-04-21 05:32:24] 2026-04-21 03:32:23,969 [wrapper] Pilot exit status: 0
[2026-04-21 05:32:24] 2026-04-21 03:32:23,985 [wrapper] pandaids: 7101016149
[2026-04-21 05:32:24] 2026-04-21 03:32:24,182 [wrapper] cleanup supervisor_pilot 3917200 3389846
[2026-04-21 05:32:24] 2026-04-21 03:32:24,187 [wrapper] Test setup, not cleaning
[2026-04-21 05:32:24] 2026-04-21 03:32:24,191 [wrapper] apfmon messages muted
[2026-04-21 05:32:24] 2026-04-21 03:32:24,195 [wrapper] ==== wrapper stdout END ====
[2026-04-21 05:32:24] 2026-04-21 03:32:24,200 [wrapper] ==== wrapper stderr END ====
[2026-04-21 05:32:24]  *** Error codes and diagnostics ***
[2026-04-21 05:32:24]     "exeErrorCode": 0,
[2026-04-21 05:32:24]     "pilotErrorCode": 0,
[2026-04-21 05:32:24]  *** Listing of results directory ***
[2026-04-21 05:32:24] total 2477212
[2026-04-21 05:32:24] -rwx------. 1 boinc boinc      36322 Apr 18 14:37 runpilot2-wrapper.sh
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc     644190 Apr 18 14:50 pilot3.tar.gz
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc       5094 Apr 18 14:54 queuedata.json
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc        100 Apr 21 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 05:32:24] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 00:41 run_atlas
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc        105 Apr 21 00:41 job.xml
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc 2255314209 Apr 21 00:41 EVNT.49820373._000010.pool.root.1
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc       6538 Apr 21 00:41 init_data.xml
[2026-04-21 05:32:24] drwxrwx--x. 2 boinc boinc       4096 Apr 21 00:41 shared
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc     656917 Apr 21 00:41 input.tar.gz
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc      15665 Apr 21 00:41 start_atlas.sh
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc          0 Apr 21 00:41 boinc_lockfile
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc       2584 Apr 21 00:41 pandaJob.out
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc     997494 Apr 21 00:41 agis_schedconf.cvmfs.json
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc        443 Apr 21 00:41 workernode_map.json
[2026-04-21 05:32:24] drwx------. 5 boinc boinc       4096 Apr 21 00:41 pilot3
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc  273040145 Apr 21 05:31 HITS.49820375._001050.pool.root.1
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc        489 Apr 21 05:31 boinc_task_state.xml
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc       1028 Apr 21 05:31 memory_monitor_summary.json
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc    1512404 Apr 21 05:31 agis_ddmendpoints.agis.ALL.json
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc     545041 Apr 21 05:31 log.49820375._001050.job.log.tgz.1
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc       6372 Apr 21 05:31 heartbeat_new.json
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc       6263 Apr 21 05:31 heartbeat.json
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc       8192 Apr 21 05:32 boinc_mmap_file
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc         28 Apr 21 05:32 wrapper_checkpoint.txt
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc         95 Apr 21 05:32 pilot_heartbeat.json
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc       5434 Apr 21 05:32 pilotlog.txt
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc    1580669 Apr 21 05:32 log.49820375._001050.job.log.1
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc        357 Apr 21 05:32 output.list
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc        410 Apr 21 05:32 runtime_log
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc    2140160 Apr 21 05:32 result.tar.gz
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc       8827 Apr 21 05:32 runtime_log.err
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc        666 Apr 21 05:32 7af753f0cdf0.diag
[2026-04-21 05:32:24] -rw-r--r--. 1 boinc boinc      20807 Apr 21 05:32 stderr.txt
[2026-04-21 05:32:24] HITS file was successfully produced:
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc 273040145 Apr 21 05:31 shared/HITS.pool.root.1
[2026-04-21 05:32:24]  *** Contents of shared directory: ***
[2026-04-21 05:32:24] total 2471860
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc 2255314209 Apr 21 00:41 ATLAS.root_0
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc     656917 Apr 21 00:41 input.tar.gz
[2026-04-21 05:32:24] -rw-r--r--. 2 boinc boinc      15665 Apr 21 00:41 start_atlas.sh
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc  273040145 Apr 21 05:31 HITS.pool.root.1
[2026-04-21 05:32:24] -rw-------. 1 boinc boinc    2140160 Apr 21 05:32 result.tar.gz
05:32:26 (3385535): run_atlas exited; CPU time 68181.375658
05:32:26 (3385535): called boinc_finish(0)

</stderr_txt>
]]>

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