Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:20 (470547): wrapper (7.7.26015): starting
18:20:20 (470547): wrapper: running run_atlas (--nthreads 3)
[2026-04-18 18:20:20] Arguments: --nthreads 3
[2026-04-18 18:20:20] Threads: 3
[2026-04-18 18:20:20] Checking for CVMFS
[2026-04-18 18:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 18:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 18:20:20] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 18:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 18:20:20] 2.9.2.0 296447 759 65444 158591 2 49 11316931 36864001 0 130560 0 494618 99.985 35781 16227 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-18 18:20:20] CVMFS is ok
[2026-04-18 18:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 18:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 18:20:20] Further information can be found at the LHC@home message board.
[2026-04-18 18:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 18:20:20] Checking for apptainer binary...
[2026-04-18 18:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 18:20:20] Running /usr/bin/apptainer --version
[2026-04-18 18:20:20] apptainer version 1.4.1-1.1
[2026-04-18 18:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 18:20:21] belleA259
[2026-04-18 18:20:21] apptainer works
[2026-04-18 18:20:21] Set ATHENA_PROC_NUMBER=3
[2026-04-18 18:20:21] Set ATHENA_CORE_NUMBER=3
[2026-04-18 18:20:21] Starting ATLAS job with PandaID=7101004298
[2026-04-18 18:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 20:48:47]  *** The last 200 lines of the pilot log: ***
[2026-04-18 20:48:47] 2026-04-18 18:48:13,619 | INFO     | did not find any defunct processes belonging to 479034
[2026-04-18 20:48:47] 2026-04-18 18:48:13,620 | INFO     | did not find any defunct processes belonging to 479034
[2026-04-18 20:48:47] 2026-04-18 18:48:13,620 | INFO     | Ready for new job
[2026-04-18 20:48:47] 2026-04-18 18:48:13,621 | INFO     | **************************************
[2026-04-18 20:48:47] 2026-04-18 18:48:13,621 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 20:48:47] 2026-04-18 18:48:13,621 | INFO     | **************************************
[2026-04-18 20:48:47] 2026-04-18 18:48:13,621 | INFO     | 
[2026-04-18 20:48:47] 2026-04-18 18:48:13,621 | INFO     | architecture information:
[2026-04-18 20:48:47] 2026-04-18 18:48:13,622 | INFO     | executing command: cat /etc/os-release
[2026-04-18 20:48:47] 2026-04-18 18:48:13,630 | INFO     | cat /etc/os-release:
[2026-04-18 20:48:47] NAME="CentOS Linux"
[2026-04-18 20:48:47] VERSION="7 (Core)"
[2026-04-18 20:48:47] ID="centos"
[2026-04-18 20:48:47] ID_LIKE="rhel fedora"
[2026-04-18 20:48:47] VERSION_ID="7"
[2026-04-18 20:48:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 20:48:47] ANSI_COLOR="0;31"
[2026-04-18 20:48:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 20:48:47] HOME_URL="https://www.centos.org/"
[2026-04-18 20:48:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 20:48:47] 
[2026-04-18 20:48:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 20:48:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 20:48:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 20:48:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 20:48:47] 
[2026-04-18 20:48:47] 2026-04-18 18:48:13,631 | INFO     | **************************************
[2026-04-18 20:48:47] 2026-04-18 18:48:14,134 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 20:48:47] 2026-04-18 18:48:14,146 | INFO     | sufficient remaining disk space (344374378496 B)
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | INFO     | update_server=False
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:48:47] 2026-04-18 18:48:14,147 | INFO     | aborting loop
[2026-04-18 20:48:47] 2026-04-18 18:48:14,160 | INFO     | all payload control threads have been joined
[2026-04-18 20:48:47] 2026-04-18 18:48:14,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 20:48:47] 2026-04-18 18:48:15,153 | INFO     | [job] retrieve thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,153 | INFO     | [job] queue monitor thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,153 | INFO     | [job] job monitor thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,165 | INFO     | [payload] control thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,209 | INFO     | all job control threads have been joined
[2026-04-18 20:48:47] 2026-04-18 18:48:15,235 | INFO     | all data control threads have been joined
[2026-04-18 20:48:47] 2026-04-18 18:48:15,406 | INFO     | [payload] validate_post thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,782 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,782 | INFO     | [job] validate thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,790 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:15,924 | INFO     | [data] copytool_in thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 20:48:47] 2026-04-18 18:48:16,215 | INFO     | [job] control thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,241 | INFO     | [data] control thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,339 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,450 | INFO     | [payload] failed_post thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:16,746 | INFO     | [data] copytool_out thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:20,117 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 20:48:47] 2026-04-18 18:48:41,128 | INFO     | [monitor] cgroup control has ended
[2026-04-18 20:48:47] 2026-04-18 18:48:42,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648405612352)>', '<ExcThread(monitor, started 139648124073728)>']
[2026-04-18 20:48:47] 2026-04-18 18:48:44,292 | INFO     | PID=474593 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-18 20:48:47] 2026-04-18 18:48:44,293 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 20:48:47] 2026-04-18 18:48:44,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 20:48:47] 2026-04-18 18:48:44,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 20:48:47] 2026-04-18 18:48:44,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 20:48:47] 2026-04-18 18:48:44,293 | INFO     | [monitor] control thread has ended
[2026-04-18 20:48:47] 2026-04-18 18:48:47,168 | INFO     | all workflow threads have been joined
[2026-04-18 20:48:47] 2026-04-18 18:48:47,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 20:48:47] 2026-04-18 18:48:47,168 | INFO     | traces error code: 0
[2026-04-18 20:48:47] 2026-04-18 18:48:47,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 20:48:47] 2026-04-18 18:48:47,218 [wrapper] ==== pilot stdout END ====
[2026-04-18 20:48:47] 2026-04-18 18:48:47,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 20:48:47] 2026-04-18 18:48:47,223 [wrapper] pilotpid: 474593
[2026-04-18 20:48:47] 2026-04-18 18:48:47,225 [wrapper] Pilot exit status: 0
[2026-04-18 20:48:47] 2026-04-18 18:48:47,233 [wrapper] pandaids: 7101004298
[2026-04-18 20:48:47] 2026-04-18 18:48:47,250 [wrapper] cleanup supervisor_pilot  493510 474594
[2026-04-18 20:48:47] 2026-04-18 18:48:47,253 [wrapper] Test setup, not cleaning
[2026-04-18 20:48:47] 2026-04-18 18:48:47,255 [wrapper] apfmon messages muted
[2026-04-18 20:48:47] 2026-04-18 18:48:47,257 [wrapper] ==== wrapper stdout END ====
[2026-04-18 20:48:47] 2026-04-18 18:48:47,260 [wrapper] ==== wrapper stderr END ====
[2026-04-18 20:48:47]  *** Error codes and diagnostics ***
[2026-04-18 20:48:47]     "exeErrorCode": 0,
[2026-04-18 20:48:47]     "pilotErrorCode": 0,
[2026-04-18 20:48:47]  *** Listing of results directory ***
[2026-04-18 20:48:47] total 2441424
[2026-04-18 20:48:47] -rwx------ 1 boinc boinc      36322 Apr 18 14:37 runpilot2-wrapper.sh
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc     644190 Apr 18 14:50 pilot3.tar.gz
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       5094 Apr 18 14:54 queuedata.json
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc        100 Apr 18 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 20:48:47] -rwxr-xr-x 1 boinc boinc       7986 Apr 18 18:20 run_atlas
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc        105 Apr 18 18:20 job.xml
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc 2221430069 Apr 18 18:20 EVNT.49820242._000003.pool.root.1
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc     656907 Apr 18 18:20 input.tar.gz
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc      15665 Apr 18 18:20 start_atlas.sh
[2026-04-18 20:48:47] drwxrwx--x 2 boinc boinc       4096 Apr 18 18:20 shared
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc          0 Apr 18 18:20 boinc_setup_complete
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       6362 Apr 18 18:20 init_data.xml
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc          0 Apr 18 18:20 boinc_lockfile
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       2550 Apr 18 18:20 pandaJob.out
[2026-04-18 20:48:47] -rw------- 1 boinc boinc     997676 Apr 18 18:20 agis_schedconf.cvmfs.json
[2026-04-18 20:48:47] -rw------- 1 boinc boinc    1512404 Apr 18 18:20 agis_ddmendpoints.agis.ALL.json
[2026-04-18 20:48:47] -rw------- 1 boinc boinc        425 Apr 18 18:20 workernode_map.json
[2026-04-18 20:48:47] drwx------ 5 boinc boinc       4096 Apr 18 18:20 pilot3
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc        488 Apr 18 20:47 boinc_task_state.xml
[2026-04-18 20:48:47] -rw------- 1 boinc boinc  271997598 Apr 18 20:47 HITS.49820244._001217.pool.root.1
[2026-04-18 20:48:47] -rw------- 1 boinc boinc       1016 Apr 18 20:48 memory_monitor_summary.json
[2026-04-18 20:48:47] -rw------- 1 boinc boinc     441988 Apr 18 20:48 log.49820244._001217.job.log.tgz.1
[2026-04-18 20:48:47] -rw------- 1 boinc boinc       6323 Apr 18 20:48 heartbeat_new.json
[2026-04-18 20:48:47] -rw------- 1 boinc boinc       6214 Apr 18 20:48 heartbeat.json
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       8192 Apr 18 20:48 boinc_mmap_file
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc         27 Apr 18 20:48 wrapper_checkpoint.txt
[2026-04-18 20:48:47] -rw------- 1 boinc boinc         95 Apr 18 20:48 pilot_heartbeat.json
[2026-04-18 20:48:47] -rw------- 1 boinc boinc       4746 Apr 18 20:48 pilotlog.txt
[2026-04-18 20:48:47] -rw------- 1 boinc boinc     828035 Apr 18 20:48 log.49820244._001217.job.log.1
[2026-04-18 20:48:47] -rw------- 1 boinc boinc        357 Apr 18 20:48 output.list
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc        410 Apr 18 20:48 runtime_log
[2026-04-18 20:48:47] -rw------- 1 boinc boinc    1290240 Apr 18 20:48 result.tar.gz
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       8533 Apr 18 20:48 runtime_log.err
[2026-04-18 20:48:47] -rw------- 1 boinc boinc        661 Apr 18 20:48 7af74ae7de15.diag
[2026-04-18 20:48:47] -rw-r--r-- 1 boinc boinc       9529 Apr 18 20:48 stderr.txt
[2026-04-18 20:48:47] HITS file was successfully produced:
[2026-04-18 20:48:47] -rw------- 1 boinc boinc 271997598 Apr 18 20:47 shared/HITS.pool.root.1
[2026-04-18 20:48:47]  *** Contents of shared directory: ***
[2026-04-18 20:48:47] total 2436920
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc 2221430069 Apr 18 18:20 ATLAS.root_0
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc     656907 Apr 18 18:20 input.tar.gz
[2026-04-18 20:48:47] -rw-r--r-- 2 boinc boinc      15665 Apr 18 18:20 start_atlas.sh
[2026-04-18 20:48:47] -rw------- 1 boinc boinc  271997598 Apr 18 20:47 HITS.pool.root.1
[2026-04-18 20:48:47] -rw------- 1 boinc boinc    1290240 Apr 18 20:48 result.tar.gz
20:48:48 (470547): run_atlas exited; CPU time 25614.166539
20:48:48 (470547): called boinc_finish(0)

</stderr_txt>
]]>

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