Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:12:15 (23666): wrapper (7.7.26015): starting
03:12:15 (23666): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 03:12:15] Arguments: --nthreads 8
[2026-04-19 03:12:15] Threads: 8
[2026-04-19 03:12:15] Checking for CVMFS
[2026-04-19 03:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 03:12:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 03:12:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 03:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 03:12:19] 2.11.2.0 6489 4808 86756 158602 3 53 19807164 25165824 1060 130560 0 1352109 99.879 447918 5829 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 03:12:19] CVMFS is ok
[2026-04-19 03:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 03:12:19] Checking for apptainer binary...
[2026-04-19 03:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 03:12:19] Running /usr/bin/apptainer --version
[2026-04-19 03:12:19] apptainer version 1.3.2-1.el7
[2026-04-19 03:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 03:12:27] cg-vwn368.simple-grid.lan
[2026-04-19 03:12:27] apptainer works
[2026-04-19 03:12:27] Set ATHENA_PROC_NUMBER=8
[2026-04-19 03:12:27] Set ATHENA_CORE_NUMBER=8
[2026-04-19 03:12:27] Starting ATLAS job with PandaID=7101003275
[2026-04-19 03:12:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 09:27:06]  *** The last 200 lines of the pilot log: ***
[2026-04-19 09:27:06] 2026-04-19 07:25:56,340 | INFO     | this job has now completed (state=finished)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,340 | INFO     | log transfer has been attempted: DONE
[2026-04-19 09:27:06] 2026-04-19 07:25:56,340 | INFO     | job 7101003275 has finished - writing final server update
[2026-04-19 09:27:06] 2026-04-19 07:25:56,341 | INFO     | total number of processed events: 400 (read)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,343 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7101003275/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,343 | INFO     | extracted standard info from prmon json
[2026-04-19 09:27:06] 2026-04-19 07:25:56,344 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 09:27:06] 2026-04-19 07:25:56,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 09:27:06] 2026-04-19 07:25:56,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 09:27:06] 2026-04-19 07:25:56,354 | INFO     | fitting pss+swap vs Time
[2026-04-19 09:27:06] 2026-04-19 07:25:56,355 | INFO     | sum of square deviations: 14108461738.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,360 | INFO     | sum of deviations: 92154591792.99998
[2026-04-19 09:27:06] 2026-04-19 07:25:56,360 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,360 | INFO     | mean y: 2522151.25210084
[2026-04-19 09:27:06] 2026-04-19 07:25:56,360 | INFO     | intersect: 2522151.25210084
[2026-04-19 09:27:06] 2026-04-19 07:25:56,361 | INFO     | chi2: 8.022816896666297
[2026-04-19 09:27:06] 2026-04-19 07:25:56,361 | INFO     | sum of square deviations: 13523929848.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,366 | INFO     | sum of deviations: 140681042783.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,366 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,366 | INFO     | mean y: 2534701.9261363638
[2026-04-19 09:27:06] 2026-04-19 07:25:56,366 | INFO     | intersect: 2534701.9261363638
[2026-04-19 09:27:06] 2026-04-19 07:25:56,367 | INFO     | chi2: 6.46291050104311
[2026-04-19 09:27:06] 2026-04-19 07:25:56,367 | INFO     | current chi2=6.46291050104311 (change=19.44337525977156 %)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,367 | INFO     | right removable region: 351
[2026-04-19 09:27:06] 2026-04-19 07:25:56,368 | INFO     | sum of square deviations: 13523929848.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,372 | INFO     | sum of deviations: -35851761220.5
[2026-04-19 09:27:06] 2026-04-19 07:25:56,372 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,372 | INFO     | mean y: 2555528.90625
[2026-04-19 09:27:06] 2026-04-19 07:25:56,372 | INFO     | intersect: 2555528.90625
[2026-04-19 09:27:06] 2026-04-19 07:25:56,373 | INFO     | chi2: 3.33614670822194
[2026-04-19 09:27:06] 2026-04-19 07:25:56,373 | INFO     | current chi2=3.33614670822194 (change=58.41676619083502 %)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,374 | INFO     | sum of square deviations: 12955770358.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,382 | INFO     | sum of deviations: -101209990248.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,382 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,382 | INFO     | mean y: 2573003.582132565
[2026-04-19 09:27:06] 2026-04-19 07:25:56,382 | INFO     | intersect: 2573003.582132565
[2026-04-19 09:27:06] 2026-04-19 07:25:56,383 | INFO     | chi2: 1.8693524981804055
[2026-04-19 09:27:06] 2026-04-19 07:25:56,383 | INFO     | current chi2=1.8693524981804055 (change=43.96671784327162 %)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,384 | INFO     | sum of square deviations: 12403750705.5
[2026-04-19 09:27:06] 2026-04-19 07:25:56,387 | INFO     | sum of deviations: -107302967074.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,387 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,388 | INFO     | mean y: 2574673.1754385964
[2026-04-19 09:27:06] 2026-04-19 07:25:56,388 | INFO     | intersect: 2574673.1754385964
[2026-04-19 09:27:06] 2026-04-19 07:25:56,388 | INFO     | chi2: 1.8339914459126803
[2026-04-19 09:27:06] 2026-04-19 07:25:56,388 | INFO     | current chi2=1.8339914459126803 (change=1.8916203499417608 %)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,389 | INFO     | left removable region: 15
[2026-04-19 09:27:06] 2026-04-19 07:25:56,389 | INFO     | sum of square deviations: 11762304260.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,393 | INFO     | sum of deviations: -57875389679.99999
[2026-04-19 09:27:06] 2026-04-19 07:25:56,393 | INFO     | mean x (centered): 0.0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,393 | INFO     | mean y: 2588614.7321428573
[2026-04-19 09:27:06] 2026-04-19 07:25:56,393 | INFO     | intersect: 2588614.7321428573
[2026-04-19 09:27:06] 2026-04-19 07:25:56,394 | INFO     | chi2: 0.1625072544716243
[2026-04-19 09:27:06] 2026-04-19 07:25:56,394 | INFO     | current memory leak: -4.92 B/s (using 336 data points, chi2=0.16)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | ..............................
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . Timing measurements:
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . get job = 0 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . initial setup = 117 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . payload setup = 183 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . stage-in = 0 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . payload execution = 21851 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,395 | INFO     | . stage-out = 3 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,396 | INFO     | . log creation = 1 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,396 | INFO     | ..............................
[2026-04-19 09:27:06] 2026-04-19 07:25:56,558 | INFO     | 
[2026-04-19 09:27:06] 2026-04-19 07:25:56,558 | INFO     | job summary report
[2026-04-19 09:27:06] 2026-04-19 07:25:56,558 | INFO     | --------------------------------------------------
[2026-04-19 09:27:06] 2026-04-19 07:25:56,558 | INFO     | PanDA job id: 7101003275
[2026-04-19 09:27:06] 2026-04-19 07:25:56,558 | INFO     | task id: 49820244
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | errors: (none)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | pilot state: finished 
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | transexitcode: 0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | exeerrorcode: 0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | exeerrordiag: 
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | exitcode: 0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,559 | INFO     | exitmsg: OK
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | cpuconsumptiontime: 103498 s
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | nevents: 400
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | neventsw: 0
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | pid: 32107
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | pgrp: 32107
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | corecount: 8
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | event service: False
[2026-04-19 09:27:06] 2026-04-19 07:25:56,560 | INFO     | sizes: {0: 2280943, 1: 2282001, 2: 2283457, 13: 2283457, 22039: 2317584, 22043: 2326582, 22044: 2326766, 22046: 2326960}
[2026-04-19 09:27:06] 2026-04-19 07:25:56,561 | INFO     | --------------------------------------------------
[2026-04-19 09:27:06] 2026-04-19 07:25:56,561 | INFO     | 
[2026-04-19 09:27:06] 2026-04-19 07:25:56,561 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-19 09:27:06] 2026-04-19 07:25:56,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,663 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,663 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,663 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | job 7101003275 has completed (purged errors)
[2026-04-19 09:27:06] 2026-04-19 07:25:56,665 | INFO     | overall cleanup function is called
[2026-04-19 09:27:06] 2026-04-19 07:25:57,675 | INFO     | --- collectZombieJob: --- 10, [32107]
[2026-04-19 09:27:06] 2026-04-19 07:25:57,675 | INFO     | zombie collector waiting for pid 32107
[2026-04-19 09:27:06] 2026-04-19 07:25:57,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 09:27:06] 2026-04-19 07:25:57,676 | INFO     | collected zombie processes
[2026-04-19 09:27:06] 2026-04-19 07:25:57,676 | INFO     | will attempt to kill all subprocesses of pid=32107
[2026-04-19 09:27:06] 2026-04-19 07:25:57,747 | INFO     | process IDs to be killed: [32107] (in reverse order)
[2026-04-19 09:27:06] 2026-04-19 07:25:58,644 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 09:27:06] 2026-04-19 07:25:58,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 09:27:06] 2026-04-19 07:25:58,646 | INFO     | did not find any defunct processes belonging to 32107
[2026-04-19 09:27:06] 2026-04-19 07:25:58,648 | INFO     | did not find any defunct processes belonging to 32107
[2026-04-19 09:27:06] 2026-04-19 07:25:58,648 | INFO     | Ready for new job
[2026-04-19 09:27:06] 2026-04-19 07:25:58,651 | INFO     | **************************************
[2026-04-19 09:27:06] 2026-04-19 07:25:58,651 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 09:27:06] 2026-04-19 07:25:58,651 | INFO     | **************************************
[2026-04-19 09:27:06] 2026-04-19 07:25:58,651 | INFO     | 
[2026-04-19 09:27:06] 2026-04-19 07:25:58,652 | INFO     | pilot is running in a VM
[2026-04-19 09:27:06] 2026-04-19 07:25:58,652 | INFO     | architecture information:
[2026-04-19 09:27:06] 2026-04-19 07:25:58,663 | INFO     | executing command: cat /etc/os-release
[2026-04-19 09:27:06] 2026-04-19 07:25:58,944 | INFO     | cat /etc/os-release:
[2026-04-19 09:27:06] NAME="CentOS Linux"
[2026-04-19 09:27:06] VERSION="7 (Core)"
[2026-04-19 09:27:06] ID="centos"
[2026-04-19 09:27:06] ID_LIKE="rhel fedora"
[2026-04-19 09:27:06] VERSION_ID="7"
[2026-04-19 09:27:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 09:27:06] ANSI_COLOR="0;31"
[2026-04-19 09:27:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 09:27:06] HOME_URL="https://www.centos.org/"
[2026-04-19 09:27:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 09:27:06] 
[2026-04-19 09:27:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 09:27:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 09:27:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 09:27:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 09:27:06] 
[2026-04-19 09:27:06] 2026-04-19 07:25:58,945 | INFO     | **************************************
[2026-04-19 09:27:06] 2026-04-19 07:25:59,448 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-19 09:27:06] 2026-04-19 07:25:59,736 | INFO     | sufficient remaining disk space (492172214272 B)
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | INFO     | update_server=False
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:27:06] 2026-04-19 07:25:59,737 | INFO     | aborting loop
[2026-04-19 09:27:06] 2026-04-19 07:25:59,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 09:27:06] 2026-04-19 07:26:00,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 09:27:06] 2026-04-19 07:26:00,600 | INFO     | all data control threads have been joined
[2026-04-19 09:27:06] 2026-04-19 07:26:00,743 | INFO     | [job] retrieve thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:00,754 | INFO     | [job] job monitor thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:00,861 | INFO     | [data] copytool_in thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:00,887 | INFO     | all payload control threads have been joined
[2026-04-19 09:27:06] 2026-04-19 07:26:01,038 | INFO     | [payload] failed_post thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,281 | INFO     | all job control threads have been joined
[2026-04-19 09:27:06] 2026-04-19 07:26:01,497 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,506 | INFO     | [payload] validate_post thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,552 | INFO     | [job] validate thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:27:06] 2026-04-19 07:26:01,606 | INFO     | [data] control thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,764 | INFO     | [data] copytool_out thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:01,893 | INFO     | [payload] control thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:02,004 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:02,087 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:02,287 | INFO     | [job] control thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:02,582 | INFO     | [job] queue monitor thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:04,087 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 09:27:06] 2026-04-19 07:26:29,799 | INFO     | PID=27656 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 09:27:06] 2026-04-19 07:26:29,800 | INFO     | .. there are 2 such processes running
[2026-04-19 09:27:06] 2026-04-19 07:26:29,800 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 09:27:06] 2026-04-19 07:26:29,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 09:27:06] 2026-04-19 07:26:29,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 09:27:06] 2026-04-19 07:26:53,939 | INFO     | [monitor] cgroup control has ended
[2026-04-19 09:27:06] 2026-04-19 07:26:55,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680451848000)>', '<ExcThread(monitor, started 140679640512256)>']
[2026-04-19 09:27:06] 2026-04-19 07:26:55,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 09:27:06] 2026-04-19 07:26:55,957 | INFO     | [monitor] control thread has ended
[2026-04-19 09:27:06] 2026-04-19 07:27:00,875 | INFO     | all workflow threads have been joined
[2026-04-19 09:27:06] 2026-04-19 07:27:00,875 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 09:27:06] 2026-04-19 07:27:00,875 | INFO     | traces error code: 0
[2026-04-19 09:27:06] 2026-04-19 07:27:00,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 09:27:06] 2026-04-19 07:27:01,311 [wrapper] ==== pilot stdout END ====
[2026-04-19 09:27:06] 2026-04-19 07:27:01,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 09:27:06] 2026-04-19 07:27:01,541 [wrapper] pilotpid: 27656
[2026-04-19 09:27:06] 2026-04-19 07:27:01,651 [wrapper] Pilot exit status: 0
[2026-04-19 09:27:06] 2026-04-19 07:27:02,147 [wrapper] pandaids: 7101003275
[2026-04-19 09:27:06] 2026-04-19 07:27:03,208 [wrapper] cleanup supervisor_pilot 22591 27657
[2026-04-19 09:27:06] 2026-04-19 07:27:03,259 [wrapper] Test setup, not cleaning
[2026-04-19 09:27:06] 2026-04-19 07:27:03,353 [wrapper] apfmon messages muted
[2026-04-19 09:27:06] 2026-04-19 07:27:03,508 [wrapper] ==== wrapper stdout END ====
[2026-04-19 09:27:06] 2026-04-19 07:27:03,632 [wrapper] ==== wrapper stderr END ====
[2026-04-19 09:27:06]  *** Error codes and diagnostics ***
[2026-04-19 09:27:06]     "exeErrorCode": 0,
[2026-04-19 09:27:06]     "pilotErrorCode": 0,
[2026-04-19 09:27:06]  *** Listing of results directory ***
[2026-04-19 09:27:06] total 2461632
[2026-04-19 09:27:06] -rwx------. 1 boinc boinc      36322 Apr 18 14:36 runpilot2-wrapper.sh
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc     644190 Apr 18 14:50 pilot3.tar.gz
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc       5094 Apr 18 14:54 queuedata.json
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc        100 Apr 19 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 09:27:06] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 03:12 run_atlas
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc        105 Apr 19 03:12 job.xml
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc 2232826562 Apr 19 03:12 EVNT.49820242._000010.pool.root.1
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc       6305 Apr 19 03:12 init_data.xml
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc      15665 Apr 19 03:12 start_atlas.sh
[2026-04-19 09:27:06] drwxrwx--x. 2 boinc boinc         68 Apr 19 03:12 shared
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc     656905 Apr 19 03:12 input.tar.gz
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc          0 Apr 19 03:12 boinc_lockfile
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc       2548 Apr 19 03:12 pandaJob.out
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc        415 Apr 19 03:18 workernode_map.json
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc     998031 Apr 19 03:18 agis_schedconf.cvmfs.json
[2026-04-19 09:27:06] drwx------. 5 boinc boinc       4096 Apr 19 03:18 pilot3
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc  278715910 Apr 19 09:24 HITS.49820244._000959.pool.root.1
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc        491 Apr 19 09:24 boinc_task_state.xml
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc       1021 Apr 19 09:25 memory_monitor_summary.json
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc    1512404 Apr 19 09:25 agis_ddmendpoints.agis.ALL.json
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc     545476 Apr 19 09:25 log.49820244._000959.job.log.tgz.1
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc       6346 Apr 19 09:25 heartbeat_new.json
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc       6237 Apr 19 09:25 heartbeat.json
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc         95 Apr 19 09:26 pilot_heartbeat.json
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc       8192 Apr 19 09:26 boinc_mmap_file
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc         29 Apr 19 09:26 wrapper_checkpoint.txt
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc       4879 Apr 19 09:27 pilotlog.txt
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc    2017209 Apr 19 09:27 log.49820244._000959.job.log.1
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc        357 Apr 19 09:27 output.list
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc        410 Apr 19 09:27 runtime_log
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc    2580480 Apr 19 09:27 result.tar.gz
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc       8438 Apr 19 09:27 runtime_log.err
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc        657 Apr 19 09:27 7ae35be207c4.diag
[2026-04-19 09:27:06] -rw-r--r--. 1 boinc boinc      20619 Apr 19 09:27 stderr.txt
[2026-04-19 09:27:06] HITS file was successfully produced:
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc 278715910 Apr 19 09:24 shared/HITS.pool.root.1
[2026-04-19 09:27:06]  *** Contents of shared directory: ***
[2026-04-19 09:27:06] total 2455860
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc 2232826562 Apr 19 03:12 ATLAS.root_0
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc      15665 Apr 19 03:12 start_atlas.sh
[2026-04-19 09:27:06] -rw-r--r--. 2 boinc boinc     656905 Apr 19 03:12 input.tar.gz
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc  278715910 Apr 19 09:24 HITS.pool.root.1
[2026-04-19 09:27:06] -rw-------. 1 boinc boinc    2580480 Apr 19 09:27 result.tar.gz
09:27:07 (23666): run_atlas exited; CPU time 103722.407938
09:27:07 (23666): called boinc_finish(0)

</stderr_txt>
]]>

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