Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:02 (28198): wrapper (7.7.26015): starting
11:55:02 (28198): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 11:55:02] Arguments: --nthreads 8
[2026-04-18 11:55:02] Threads: 8
[2026-04-18 11:55:02] Checking for CVMFS
[2026-04-18 11:55:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 11:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 11:55:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 11:55:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 11:55:02] 2.11.2.0 4329 172469 268416 158589 0 188 10022015 18432000 1833 130560 0 86948791 99.962 7544795 20180 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 11:55:02] CVMFS is ok
[2026-04-18 11:55:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 11:55:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 11:55:02] Further information can be found at the LHC@home message board.
[2026-04-18 11:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 11:55:02] Checking for apptainer binary...
[2026-04-18 11:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 11:55:02] Running /usr/bin/apptainer --version
[2026-04-18 11:55:02] apptainer version 1.3.2-1.el7
[2026-04-18 11:55:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 11:55:03] c-206-17.aglt2.org
[2026-04-18 11:55:03] apptainer works
[2026-04-18 11:55:03] Set ATHENA_PROC_NUMBER=8
[2026-04-18 11:55:03] Set ATHENA_CORE_NUMBER=8
[2026-04-18 11:55:03] Starting ATLAS job with PandaID=7101002254
[2026-04-18 11:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 17:05:56]  *** The last 200 lines of the pilot log: ***
[2026-04-18 17:05:56] 2026-04-18 21:04:54,737 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,737 | INFO     | mean y: 2535317.710526316
[2026-04-18 17:05:56] 2026-04-18 21:04:54,737 | INFO     | intersect: 2535317.710526316
[2026-04-18 17:05:56] 2026-04-18 21:04:54,738 | INFO     | chi2: 1.5605591172200517
[2026-04-18 17:05:56] 2026-04-18 21:04:54,738 | INFO     | sum of square deviations: 8288713550.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,740 | INFO     | sum of deviations: 79066483399.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,740 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,740 | INFO     | mean y: 2534620.662207358
[2026-04-18 17:05:56] 2026-04-18 21:04:54,740 | INFO     | intersect: 2534620.662207358
[2026-04-18 17:05:56] 2026-04-18 21:04:54,741 | INFO     | chi2: 1.5606437110030367
[2026-04-18 17:05:56] 2026-04-18 21:04:54,741 | INFO     | current chi2=1.5606437110030367 (change=-0.00542073555891109 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,741 | INFO     | right removable region: 298
[2026-04-18 17:05:56] 2026-04-18 21:04:54,741 | INFO     | sum of square deviations: 8288713550.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,743 | INFO     | sum of deviations: 28610565198.999996
[2026-04-18 17:05:56] 2026-04-18 21:04:54,743 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,743 | INFO     | mean y: 2554093.695652174
[2026-04-18 17:05:56] 2026-04-18 21:04:54,743 | INFO     | intersect: 2554093.695652174
[2026-04-18 17:05:56] 2026-04-18 21:04:54,744 | INFO     | chi2: 0.03888362288509175
[2026-04-18 17:05:56] 2026-04-18 21:04:54,744 | INFO     | current chi2=0.03888362288509175 (change=97.50835309883304 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,744 | INFO     | sum of square deviations: 7879803557.5
[2026-04-18 17:05:56] 2026-04-18 21:04:54,746 | INFO     | sum of deviations: 18830617924.499992
[2026-04-18 17:05:56] 2026-04-18 21:04:54,746 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,746 | INFO     | mean y: 2557731.023809524
[2026-04-18 17:05:56] 2026-04-18 21:04:54,746 | INFO     | intersect: 2557731.023809524
[2026-04-18 17:05:56] 2026-04-18 21:04:54,747 | INFO     | chi2: 0.0066930722355687585
[2026-04-18 17:05:56] 2026-04-18 21:04:54,747 | INFO     | current chi2=0.0066930722355687585 (change=82.78691197230253 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,747 | INFO     | sum of square deviations: 7484568240.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,749 | INFO     | sum of deviations: 15022281205.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,749 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,749 | INFO     | mean y: 2559199.0484429067
[2026-04-18 17:05:56] 2026-04-18 21:04:54,749 | INFO     | intersect: 2559199.0484429067
[2026-04-18 17:05:56] 2026-04-18 21:04:54,750 | INFO     | chi2: 0.0032420278380608566
[2026-04-18 17:05:56] 2026-04-18 21:04:54,750 | INFO     | current chi2=0.0032420278380608566 (change=51.561439590747845 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,750 | INFO     | sum of square deviations: 7102775035.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,752 | INFO     | sum of deviations: 12448740218.499998
[2026-04-18 17:05:56] 2026-04-18 21:04:54,752 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,752 | INFO     | mean y: 2560225.2288732394
[2026-04-18 17:05:56] 2026-04-18 21:04:54,752 | INFO     | intersect: 2560225.2288732394
[2026-04-18 17:05:56] 2026-04-18 21:04:54,753 | INFO     | chi2: 0.0017643918386669964
[2026-04-18 17:05:56] 2026-04-18 21:04:54,753 | INFO     | current chi2=0.0017643918386669964 (change=45.577523488437215 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,753 | INFO     | sum of square deviations: 6734191380.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,755 | INFO     | sum of deviations: 10844817594.999998
[2026-04-18 17:05:56] 2026-04-18 21:04:54,755 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,755 | INFO     | mean y: 2560888.5734767024
[2026-04-18 17:05:56] 2026-04-18 21:04:54,755 | INFO     | intersect: 2560888.5734767024
[2026-04-18 17:05:56] 2026-04-18 21:04:54,756 | INFO     | chi2: 0.0013570141676408094
[2026-04-18 17:05:56] 2026-04-18 21:04:54,756 | INFO     | current chi2=0.0013570141676408094 (change=23.08884353795029 %)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,756 | INFO     | left removable region: 25
[2026-04-18 17:05:56] 2026-04-18 21:04:54,756 | INFO     | sum of square deviations: 6309000152.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,758 | INFO     | sum of deviations: 10030702933.000002
[2026-04-18 17:05:56] 2026-04-18 21:04:54,758 | INFO     | mean x (centered): 0.0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,758 | INFO     | mean y: 2560538.241758242
[2026-04-18 17:05:56] 2026-04-18 21:04:54,758 | INFO     | intersect: 2560538.241758242
[2026-04-18 17:05:56] 2026-04-18 21:04:54,759 | INFO     | chi2: 0.0013507298269258283
[2026-04-18 17:05:56] 2026-04-18 21:04:54,759 | INFO     | current memory leak: 1.59 B/s (using 273 data points, chi2=0.00)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,759 | INFO     | could have reported an average CPU frequency of 2405 MHz (14 samples)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,759 | INFO     | ..............................
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . Timing measurements:
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . get job = 0 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . initial setup = 5 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . payload setup = 12 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . stage-in = 0 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . payload execution = 18538 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . stage-out = 2 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | . log creation = 0 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,760 | INFO     | ..............................
[2026-04-18 17:05:56] 2026-04-18 21:04:54,844 | INFO     | 
[2026-04-18 17:05:56] 2026-04-18 21:04:54,844 | INFO     | job summary report
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | --------------------------------------------------
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | PanDA job id: 7101002254
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | task id: 49820244
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | errors: (none)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | pilot state: finished 
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | transexitcode: 0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | exeerrorcode: 0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | exeerrordiag: 
[2026-04-18 17:05:56] 2026-04-18 21:04:54,845 | INFO     | exitcode: 0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | exitmsg: OK
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | cpuconsumptiontime: 142562 s
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | nevents: 400
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | neventsw: 0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | pid: 4337
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | pgrp: 4337
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | corecount: 8
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | event service: False
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | sizes: {0: 2281600, 1: 2283429, 12: 2283429, 18554: 2315869, 18557: 2324867, 18560: 2324951, 18563: 2325273}
[2026-04-18 17:05:56] 2026-04-18 21:04:54,846 | INFO     | --------------------------------------------------
[2026-04-18 17:05:56] 2026-04-18 21:04:54,847 | INFO     | 
[2026-04-18 17:05:56] 2026-04-18 21:04:54,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | job 7101002254 has completed (purged errors)
[2026-04-18 17:05:56] 2026-04-18 21:04:54,862 | INFO     | overall cleanup function is called
[2026-04-18 17:05:56] 2026-04-18 21:04:55,871 | INFO     | --- collectZombieJob: --- 10, [4337]
[2026-04-18 17:05:56] 2026-04-18 21:04:55,873 | INFO     | zombie collector waiting for pid 4337
[2026-04-18 17:05:56] 2026-04-18 21:04:55,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 17:05:56] 2026-04-18 21:04:55,873 | INFO     | collected zombie processes
[2026-04-18 17:05:56] 2026-04-18 21:04:55,873 | INFO     | will attempt to kill all subprocesses of pid=4337
[2026-04-18 17:05:56] 2026-04-18 21:04:55,971 | INFO     | process IDs to be killed: [4337] (in reverse order)
[2026-04-18 17:05:56] 2026-04-18 21:04:56,010 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 17:05:56] 2026-04-18 21:04:56,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 17:05:56] 2026-04-18 21:04:56,013 | INFO     | did not find any defunct processes belonging to 4337
[2026-04-18 17:05:56] 2026-04-18 21:04:56,015 | INFO     | did not find any defunct processes belonging to 4337
[2026-04-18 17:05:56] 2026-04-18 21:04:56,015 | INFO     | Ready for new job
[2026-04-18 17:05:56] 2026-04-18 21:04:56,017 | INFO     | **************************************
[2026-04-18 17:05:56] 2026-04-18 21:04:56,017 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 17:05:56] 2026-04-18 21:04:56,018 | INFO     | **************************************
[2026-04-18 17:05:56] 2026-04-18 21:04:56,018 | INFO     | 
[2026-04-18 17:05:56] 2026-04-18 21:04:56,018 | INFO     | architecture information:
[2026-04-18 17:05:56] 2026-04-18 21:04:56,019 | INFO     | executing command: cat /etc/os-release
[2026-04-18 17:05:56] 2026-04-18 21:04:56,029 | INFO     | cat /etc/os-release:
[2026-04-18 17:05:56] NAME="CentOS Linux"
[2026-04-18 17:05:56] VERSION="7 (Core)"
[2026-04-18 17:05:56] ID="centos"
[2026-04-18 17:05:56] ID_LIKE="rhel fedora"
[2026-04-18 17:05:56] VERSION_ID="7"
[2026-04-18 17:05:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 17:05:56] ANSI_COLOR="0;31"
[2026-04-18 17:05:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 17:05:56] HOME_URL="https://www.centos.org/"
[2026-04-18 17:05:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 17:05:56] 
[2026-04-18 17:05:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 17:05:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 17:05:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 17:05:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 17:05:56] 
[2026-04-18 17:05:56] 2026-04-18 21:04:56,029 | INFO     | **************************************
[2026-04-18 17:05:56] 2026-04-18 21:04:56,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 17:05:56] 2026-04-18 21:04:56,544 | INFO     | sufficient remaining disk space (20380123136 B)
[2026-04-18 17:05:56] 2026-04-18 21:04:56,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 17:05:56] 2026-04-18 21:04:56,544 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 17:05:56] 2026-04-18 21:04:56,545 | INFO     | update_server=False
[2026-04-18 17:05:56] 2026-04-18 21:04:56,545 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 17:05:56] 2026-04-18 21:04:56,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:05:56] 2026-04-18 21:04:56,594 | INFO     | all data control threads have been joined
[2026-04-18 17:05:56] 2026-04-18 21:04:56,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 17:05:56] 2026-04-18 21:04:57,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:05:56] 2026-04-18 21:04:57,165 | INFO     | aborting loop
[2026-04-18 17:05:56] 2026-04-18 21:04:57,546 | INFO     | [job] queue monitor thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:57,550 | INFO     | [job] retrieve thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:57,567 | INFO     | all payload control threads have been joined
[2026-04-18 17:05:56] 2026-04-18 21:04:57,598 | INFO     | [data] control thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:57,726 | INFO     | [job] validate thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:57,862 | INFO     | all job control threads have been joined
[2026-04-18 17:05:56] 2026-04-18 21:04:57,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 17:05:56] 2026-04-18 21:04:58,165 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,168 | INFO     | [job] job monitor thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,221 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,319 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,376 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,572 | INFO     | [payload] control thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,621 | INFO     | [data] copytool_in thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,752 | INFO     | [data] copytool_out thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,829 | INFO     | [payload] failed_post thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:58,867 | INFO     | [job] control thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:04:59,136 | INFO     | [payload] validate_post thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:05:01,910 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 17:05:56] 2026-04-18 21:05:26,519 | INFO     | PID=32182 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 17:05:56] 2026-04-18 21:05:26,519 | INFO     | .. there are 2 such processes running
[2026-04-18 17:05:56] 2026-04-18 21:05:26,520 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 17:05:56] 2026-04-18 21:05:26,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 17:05:56] 2026-04-18 21:05:26,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 17:05:56] 2026-04-18 21:05:49,512 | INFO     | [monitor] cgroup control has ended
[2026-04-18 17:05:56] 2026-04-18 21:05:51,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851700619072)>', '<ExcThread(monitor, started 139851038975744)>']
[2026-04-18 17:05:56] 2026-04-18 21:05:51,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 17:05:56] 2026-04-18 21:05:51,633 | INFO     | [monitor] control thread has ended
[2026-04-18 17:05:56] 2026-04-18 21:05:56,387 | INFO     | all workflow threads have been joined
[2026-04-18 17:05:56] 2026-04-18 21:05:56,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 17:05:56] 2026-04-18 21:05:56,388 | INFO     | traces error code: 0
[2026-04-18 17:05:56] 2026-04-18 21:05:56,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 17:05:56] 2026-04-18 21:05:56,490 [wrapper] ==== pilot stdout END ====
[2026-04-18 17:05:56] 2026-04-18 21:05:56,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 17:05:56] 2026-04-18 21:05:56,494 [wrapper] pilotpid: 32182
[2026-04-18 17:05:56] 2026-04-18 21:05:56,497 [wrapper] Pilot exit status: 0
[2026-04-18 17:05:56] 2026-04-18 21:05:56,504 [wrapper] pandaids: 7101002254
[2026-04-18 17:05:56] 2026-04-18 21:05:56,532 [wrapper] cleanup supervisor_pilot   618 32183
[2026-04-18 17:05:56] 2026-04-18 21:05:56,534 [wrapper] Test setup, not cleaning
[2026-04-18 17:05:56] 2026-04-18 21:05:56,536 [wrapper] apfmon messages muted
[2026-04-18 17:05:56] 2026-04-18 21:05:56,539 [wrapper] ==== wrapper stdout END ====
[2026-04-18 17:05:56] 2026-04-18 21:05:56,541 [wrapper] ==== wrapper stderr END ====
[2026-04-18 17:05:56]  *** Error codes and diagnostics ***
[2026-04-18 17:05:56]     "exeErrorCode": 0,
[2026-04-18 17:05:56]     "pilotErrorCode": 0,
[2026-04-18 17:05:56]  *** Listing of results directory ***
[2026-04-18 17:05:56] total 2463404
[2026-04-18 17:05:56] -rwx------ 1 boincer umatlas      36322 Apr 18 08:35 runpilot2-wrapper.sh
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas       5094 Apr 18 08:50 queuedata.json
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas     644190 Apr 18 08:50 pilot3.tar.gz
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas        100 Apr 18 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 17:05:56] -rwxr-xr-x 1 boincer umatlas       7986 Apr 18 11:54 run_atlas
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas        105 Apr 18 11:54 job.xml
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas 2239880546 Apr 18 11:55 EVNT.49820242._000004.pool.root.1
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas      15665 Apr 18 11:55 start_atlas.sh
[2026-04-18 17:05:56] drwxrwx--x 2 boincer umatlas       4096 Apr 18 11:55 shared
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas     656907 Apr 18 11:55 input.tar.gz
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas          0 Apr 18 11:55 boinc_lockfile
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas       2548 Apr 18 11:55 pandaJob.out
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas         57 Apr 18 11:55 setup.sh.local
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas     997668 Apr 18 11:55 agis_schedconf.cvmfs.json
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas        445 Apr 18 11:55 workernode_map.json
[2026-04-18 17:05:56] drwx------ 5 boincer umatlas       4096 Apr 18 11:55 pilot3
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas       5869 Apr 18 17:00 init_data.xml
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas  273947070 Apr 18 17:04 HITS.49820244._000516.pool.root.1
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas        490 Apr 18 17:04 boinc_task_state.xml
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas         95 Apr 18 17:04 pilot_heartbeat.json
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas       1055 Apr 18 17:04 memory_monitor_summary.json
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas    1512404 Apr 18 17:04 agis_ddmendpoints.agis.ALL.json
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas     614189 Apr 18 17:04 log.49820244._000516.job.log.tgz.1
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas       6444 Apr 18 17:04 heartbeat_new.json
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas       6335 Apr 18 17:04 heartbeat.json
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas       8192 Apr 18 17:05 boinc_mmap_file
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas         29 Apr 18 17:05 wrapper_checkpoint.txt
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas       4816 Apr 18 17:05 pilotlog.txt
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas    1707024 Apr 18 17:05 log.49820244._000516.job.log.1
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas        357 Apr 18 17:05 output.list
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas        410 Apr 18 17:05 runtime_log
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas    2334720 Apr 18 17:05 result.tar.gz
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas       8964 Apr 18 17:05 runtime_log.err
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas        662 Apr 18 17:05 7a894ce14b17.diag
[2026-04-18 17:05:56] -rw-r--r-- 1 boincer umatlas      20764 Apr 18 17:05 stderr.txt
[2026-04-18 17:05:56] HITS file was successfully produced:
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas 273947070 Apr 18 17:04 shared/HITS.pool.root.1
[2026-04-18 17:05:56]  *** Contents of shared directory: ***
[2026-04-18 17:05:56] total 2457860
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas 2239880546 Apr 18 11:55 ATLAS.root_0
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas      15665 Apr 18 11:55 start_atlas.sh
[2026-04-18 17:05:56] -rw-r--r-- 2 boincer umatlas     656907 Apr 18 11:55 input.tar.gz
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas  273947070 Apr 18 17:04 HITS.pool.root.1
[2026-04-18 17:05:56] -rw------- 1 boincer umatlas    2334720 Apr 18 17:05 result.tar.gz
17:05:58 (28198): run_atlas exited; CPU time 142858.536219
17:05:58 (28198): called boinc_finish(0)

</stderr_txt>
]]>

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