Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:45:19 (564231): wrapper (7.7.26015): starting
20:45:19 (564231): wrapper: running run_atlas (--nthreads 3)
[2026-04-18 20:45:19] Arguments: --nthreads 3
[2026-04-18 20:45:19] Threads: 3
[2026-04-18 20:45:19] Checking for CVMFS
[2026-04-18 20:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 20:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 20:45:20] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 20:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 20:45:20] 2.9.2.0 451080 659 66724 158594 2 50 34655484 36864001 0 130560 0 439473 99.985 29378 26952 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-18 20:45:20] CVMFS is ok
[2026-04-18 20:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 20:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 20:45:20] Further information can be found at the LHC@home message board.
[2026-04-18 20:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 20:45:20] Checking for apptainer binary...
[2026-04-18 20:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 20:45:20] Running /usr/bin/apptainer --version
[2026-04-18 20:45:20] apptainer version 1.4.1-1.1
[2026-04-18 20:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 20:45:20] thA337a
[2026-04-18 20:45:20] apptainer works
[2026-04-18 20:45:20] Set ATHENA_PROC_NUMBER=3
[2026-04-18 20:45:20] Set ATHENA_CORE_NUMBER=3
[2026-04-18 20:45:20] Starting ATLAS job with PandaID=7098003585
[2026-04-18 20:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 22:06:52]  *** The last 200 lines of the pilot log: ***
[2026-04-18 22:06:52] 2026-04-18 20:06:21,817 | INFO     | cat /etc/os-release:
[2026-04-18 22:06:52] NAME="CentOS Linux"
[2026-04-18 22:06:52] VERSION="7 (Core)"
[2026-04-18 22:06:52] ID="centos"
[2026-04-18 22:06:52] ID_LIKE="rhel fedora"
[2026-04-18 22:06:52] VERSION_ID="7"
[2026-04-18 22:06:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 22:06:52] ANSI_COLOR="0;31"
[2026-04-18 22:06:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 22:06:52] HOME_URL="https://www.centos.org/"
[2026-04-18 22:06:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 22:06:52] 
[2026-04-18 22:06:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 22:06:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 22:06:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 22:06:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 22:06:52] 
[2026-04-18 22:06:52] 2026-04-18 20:06:21,818 | INFO     | **************************************
[2026-04-18 22:06:52] 2026-04-18 20:06:22,321 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | INFO     | sufficient remaining disk space (364102287360 B)
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | INFO     | update_server=False
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 22:06:52] 2026-04-18 20:06:22,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 22:06:52] 2026-04-18 20:06:22,582 | INFO     | all data control threads have been joined
[2026-04-18 22:06:52] 2026-04-18 20:06:22,728 | INFO     | all job control threads have been joined
[2026-04-18 22:06:52] 2026-04-18 20:06:23,340 | INFO     | [job] retrieve thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,340 | INFO     | [job] queue monitor thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,362 | INFO     | all payload control threads have been joined
[2026-04-18 22:06:52] 2026-04-18 20:06:23,588 | INFO     | [data] control thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,734 | INFO     | [job] control thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,807 | INFO     | [job] validate thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,873 | INFO     | [payload] failed_post thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,895 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,947 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:23,991 | INFO     | [data] copytool_in thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:24,341 | INFO     | [data] copytool_out thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:24,368 | INFO     | [payload] control thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:24,442 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:24,770 | INFO     | [payload] validate_post thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:24,796 | WARNING  | process 572702 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 22:06:52] 2026-04-18 20:06:24,824 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 22:06:52] 2026-04-18 20:06:24,858 | INFO     | number of running child processes to parent process 572702: 1
[2026-04-18 22:06:52] 2026-04-18 20:06:24,858 | INFO     | maximum number of monitored processes: 6
[2026-04-18 22:06:52] 2026-04-18 20:06:24,858 | INFO     | aborting job monitoring since job object (job id=7098003585) has expired
[2026-04-18 22:06:52] 2026-04-18 20:06:24,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 22:06:52] 2026-04-18 20:06:24,858 | INFO     | will abort loop
[2026-04-18 22:06:52] 2026-04-18 20:06:25,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 22:06:52] 2026-04-18 20:06:25,864 | INFO     | [job] job monitor thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:29,536 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:32,844 | INFO     | job.realtimelogging is not enabled
[2026-04-18 22:06:52] 2026-04-18 20:06:33,850 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 22:06:52] 2026-04-18 20:06:38,367 | INFO     | [monitor] cgroup control has ended
[2026-04-18 22:06:52] 2026-04-18 20:06:38,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331897591616)>', '<ExcThread(monitor, started 140331278399232)>']
[2026-04-18 22:06:52] 2026-04-18 20:06:43,890 | INFO     | all workflow threads have been joined
[2026-04-18 22:06:52] 2026-04-18 20:06:43,890 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 22:06:52] 2026-04-18 20:06:43,890 | INFO     | traces error code: 0
[2026-04-18 22:06:52] 2026-04-18 20:06:43,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 22:06:52] 2026-04-18 20:06:52,690 | INFO     | PID=568274 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | CRITICAL | thread 'MainThread' is not alive
[2026-04-18 22:06:52] 2026-04-18 20:06:52,691 | INFO     | [monitor] control thread has ended
[2026-04-18 22:06:52] 2026-04-18 20:06:52,737 [wrapper] ==== pilot stdout END ====
[2026-04-18 22:06:52] 2026-04-18 20:06:52,739 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 22:06:52] 2026-04-18 20:06:52,742 [wrapper] pilotpid: 568274
[2026-04-18 22:06:52] 2026-04-18 20:06:52,744 [wrapper] Pilot exit status: 0
[2026-04-18 22:06:52] 2026-04-18 20:06:52,751 [wrapper] pandaids: 7098003585
[2026-04-18 22:06:52] 2026-04-18 20:06:52,767 [wrapper] cleanup supervisor_pilot  578011 568275
[2026-04-18 22:06:52] 2026-04-18 20:06:52,769 [wrapper] Test setup, not cleaning
[2026-04-18 22:06:52] 2026-04-18 20:06:52,771 [wrapper] apfmon messages muted
[2026-04-18 22:06:52] 2026-04-18 20:06:52,774 [wrapper] ==== wrapper stdout END ====
[2026-04-18 22:06:52] 2026-04-18 20:06:52,776 [wrapper] ==== wrapper stderr END ====
[2026-04-18 22:06:52]  *** Error codes and diagnostics ***
[2026-04-18 22:06:52]     "exeErrorCode": 0,
[2026-04-18 22:06:52]     "pilotErrorCode": 0,
[2026-04-18 22:06:52]  *** Listing of results directory ***
[2026-04-18 22:06:52] total 460956
[2026-04-18 22:06:52] -rwx------ 1 boinc boinc     36322 Apr 18 10:56 runpilot2-wrapper.sh
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      5094 Apr 18 11:06 queuedata.json
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc       100 Apr 18 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 22:06:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 20:45 run_atlas
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc       105 Apr 18 20:45 job.xml
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc 279004666 Apr 18 20:45 EVNT.49539591._000455.pool.root.1
[2026-04-18 22:06:52] drwxrwx--x 2 boinc boinc      4096 Apr 18 20:45 shared
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc    656943 Apr 18 20:45 input.tar.gz
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc     15665 Apr 18 20:45 start_atlas.sh
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc         0 Apr 18 20:45 boinc_setup_complete
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      6362 Apr 18 20:45 init_data.xml
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc         0 Apr 18 20:45 boinc_lockfile
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      2606 Apr 18 20:45 pandaJob.out
[2026-04-18 22:06:52] -rw------- 1 boinc boinc    997676 Apr 18 20:45 agis_schedconf.cvmfs.json
[2026-04-18 22:06:52] -rw------- 1 boinc boinc   1512404 Apr 18 20:45 agis_ddmendpoints.agis.ALL.json
[2026-04-18 22:06:52] -rw------- 1 boinc boinc       415 Apr 18 20:45 workernode_map.json
[2026-04-18 22:06:52] drwx------ 5 boinc boinc      4096 Apr 18 20:45 pilot3
[2026-04-18 22:06:52] -rw------- 1 boinc boinc 187534698 Apr 18 22:06 HITS.49545114._030170.pool.root.1
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc       487 Apr 18 22:06 boinc_task_state.xml
[2026-04-18 22:06:52] -rw------- 1 boinc boinc      1012 Apr 18 22:06 memory_monitor_summary.json
[2026-04-18 22:06:52] -rw------- 1 boinc boinc    241121 Apr 18 22:06 log.49545114._030170.job.log.tgz.1
[2026-04-18 22:06:52] -rw------- 1 boinc boinc      6306 Apr 18 22:06 heartbeat_new.json
[2026-04-18 22:06:52] -rw------- 1 boinc boinc      6197 Apr 18 22:06 heartbeat.json
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      8192 Apr 18 22:06 boinc_mmap_file
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc        27 Apr 18 22:06 wrapper_checkpoint.txt
[2026-04-18 22:06:52] -rw------- 1 boinc boinc       816 Apr 18 22:06 pilotlog.txt
[2026-04-18 22:06:52] -rw------- 1 boinc boinc        95 Apr 18 22:06 pilot_heartbeat.json
[2026-04-18 22:06:52] -rw------- 1 boinc boinc    475942 Apr 18 22:06 log.49545114._030170.job.log.1
[2026-04-18 22:06:52] -rw------- 1 boinc boinc       357 Apr 18 22:06 output.list
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc       410 Apr 18 22:06 runtime_log
[2026-04-18 22:06:52] -rw------- 1 boinc boinc    737280 Apr 18 22:06 result.tar.gz
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      8523 Apr 18 22:06 runtime_log.err
[2026-04-18 22:06:52] -rw------- 1 boinc boinc       658 Apr 18 22:06 472940e6fdc4.diag
[2026-04-18 22:06:52] -rw-r--r-- 1 boinc boinc      9503 Apr 18 22:06 stderr.txt
[2026-04-18 22:06:52] HITS file was successfully produced:
[2026-04-18 22:06:52] -rw------- 1 boinc boinc 187534698 Apr 18 22:06 shared/HITS.pool.root.1
[2026-04-18 22:06:52]  *** Contents of shared directory: ***
[2026-04-18 22:06:52] total 456996
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc 279004666 Apr 18 20:45 ATLAS.root_0
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc    656943 Apr 18 20:45 input.tar.gz
[2026-04-18 22:06:52] -rw-r--r-- 2 boinc boinc     15665 Apr 18 20:45 start_atlas.sh
[2026-04-18 22:06:52] -rw------- 1 boinc boinc 187534698 Apr 18 22:06 HITS.pool.root.1
[2026-04-18 22:06:52] -rw------- 1 boinc boinc    737280 Apr 18 22:06 result.tar.gz
22:06:54 (564231): run_atlas exited; CPU time 13530.949015
22:06:54 (564231): called boinc_finish(0)

</stderr_txt>
]]>

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