Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:25 (4042087): wrapper (7.7.26015): starting
03:26:25 (4042087): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 03:26:25] Arguments: --nthreads 4
[2026-04-21 03:26:25] Threads: 4
[2026-04-21 03:26:25] Checking for CVMFS
[2026-04-21 03:26:25] No cvmfs_config command found, will try listing directly
[2026-04-21 03:26:25] CVMFS is ok
[2026-04-21 03:26:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 03:26:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 03:26:25] Further information can be found at the LHC@home message board.
[2026-04-21 03:26:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 03:26:25] Checking for apptainer binary...
[2026-04-21 03:26:25] which: no apptainer in ((null))
[2026-04-21 03:26:25] apptainer is not installed, using version from CVMFS
[2026-04-21 03:26:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 03:26:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-21 03:26:25] apptainer works
[2026-04-21 03:26:25] Set ATHENA_PROC_NUMBER=4
[2026-04-21 03:26:25] Set ATHENA_CORE_NUMBER=4
[2026-04-21 03:26:25] Starting ATLAS job with PandaID=7101002127
[2026-04-21 03:26:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 06:40:09]  *** The last 200 lines of the pilot log: ***
[2026-04-21 06:40:09] 2026-04-21 04:39:02,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,512 | INFO     | job 7101002127 has state=finished
[2026-04-21 06:40:09] 2026-04-21 04:39:04,512 | INFO     | preparing for final server update for job 7101002127 in state='finished'
[2026-04-21 06:40:09] 2026-04-21 04:39:04,512 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7101002127/jobReport.json
[2026-04-21 06:40:09] 2026-04-21 04:39:04,514 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/0/workernode_map.json
[2026-04-21 06:40:09] 2026-04-21 04:39:04,514 | INFO     | this job has now completed (state=finished)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,514 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,514 | INFO     | log transfer has been attempted: DONE
[2026-04-21 06:40:09] 2026-04-21 04:39:04,514 | INFO     | job 7101002127 has finished - writing final server update
[2026-04-21 06:40:09] 2026-04-21 04:39:04,515 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8988/.job.ad'
[2026-04-21 06:40:09] 2026-04-21 04:39:04,515 | INFO     | total number of processed events: 400 (read)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,530 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7101002127/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,530 | INFO     | extracted standard info from prmon json
[2026-04-21 06:40:09] 2026-04-21 04:39:04,530 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 06:40:09] 2026-04-21 04:39:04,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 06:40:09] 2026-04-21 04:39:04,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 06:40:09] 2026-04-21 04:39:04,533 | INFO     | fitting pss+swap vs Time
[2026-04-21 06:40:09] 2026-04-21 04:39:04,533 | INFO     | sum of square deviations: 2093397390.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,533 | INFO     | sum of deviations: 3295788946.999996
[2026-04-21 06:40:09] 2026-04-21 04:39:04,533 | INFO     | mean x (centered): 0.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,533 | INFO     | mean y: 2371513.8412698414
[2026-04-21 06:40:09] 2026-04-21 04:39:04,534 | INFO     | intersect: 2371513.8412698414
[2026-04-21 06:40:09] 2026-04-21 04:39:04,534 | INFO     | chi2: 1.3082631960317626
[2026-04-21 06:40:09] 2026-04-21 04:39:04,534 | INFO     | sum of square deviations: 1931608310.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | sum of deviations: 3200521495.499999
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | mean x (centered): 0.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | mean y: 2371424.027173913
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | intersect: 2371424.027173913
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | chi2: 1.308565101606017
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | current chi2=1.308565101606017 (change=-0.02307682239858926 %)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | right removable region: 183
[2026-04-21 06:40:09] 2026-04-21 04:39:04,535 | INFO     | sum of square deviations: 1931608310.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | sum of deviations: -18350783171.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | mean x (centered): 0.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | mean y: 2391594.684782609
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | intersect: 2391594.684782609
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | chi2: 0.05796779882469013
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | current chi2=0.05796779882469013 (change=95.56910268510812 %)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,536 | INFO     | sum of square deviations: 1778377530.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | sum of deviations: -15694011741.000002
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | mean x (centered): 0.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | mean y: 2388941.1396648046
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | intersect: 2388941.1396648046
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | chi2: 0.05585409492613214
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | current chi2=0.05585409492613214 (change=3.646341488574343 %)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,537 | INFO     | left removable region: 10
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | sum of square deviations: 1605470102.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | sum of deviations: -15230695574.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | mean x (centered): 0.0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | mean y: 2389431.710982659
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | intersect: 2389431.710982659
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | chi2: 0.054584316598092784
[2026-04-21 06:40:09] 2026-04-21 04:39:04,538 | INFO     | current memory leak: -9.49 B/s (using 173 data points, chi2=0.05)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | could have reported an average CPU frequency of 2733 MHz (10 samples)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | ..............................
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . Timing measurements:
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . get job = 0 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . initial setup = 7 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . payload setup = 13 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . stage-in = 0 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . payload execution = 11503 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . stage-out = 0 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | . log creation = 0 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,539 | INFO     | ..............................
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | 
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | job summary report
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | --------------------------------------------------
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | PanDA job id: 7101002127
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | task id: 49820244
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | errors: (none)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | pilot state: finished 
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | transexitcode: 0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,597 | INFO     | exeerrorcode: 0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | exeerrordiag: 
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | exitcode: 0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | exitmsg: OK
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | cpuconsumptiontime: 44473 s
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | nevents: 400
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | neventsw: 0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | pid: 4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | pgrp: 4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | corecount: 4
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | event service: False
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | sizes: {0: 2283412, 11: 2283412, 11521: 2312954, 11522: 2321974, 11524: 2322030, 11527: 2322224}
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | --------------------------------------------------
[2026-04-21 06:40:09] 2026-04-21 04:39:04,598 | INFO     | 
[2026-04-21 06:40:09] 2026-04-21 04:39:04,599 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-21 06:40:09] 2026-04-21 04:39:04,622 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,622 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,622 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,622 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | job 7101002127 has completed (purged errors)
[2026-04-21 06:40:09] 2026-04-21 04:39:04,624 | INFO     | overall cleanup function is called
[2026-04-21 06:40:09] 2026-04-21 04:39:05,634 | INFO     | --- collectZombieJob: --- 10, [4051376]
[2026-04-21 06:40:09] 2026-04-21 04:39:05,634 | INFO     | zombie collector waiting for pid 4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:05,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 06:40:09] 2026-04-21 04:39:05,634 | INFO     | collected zombie processes
[2026-04-21 06:40:09] 2026-04-21 04:39:05,634 | INFO     | will attempt to kill all subprocesses of pid=4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:06,040 | INFO     | process IDs to be killed: [4051376] (in reverse order)
[2026-04-21 06:40:09] 2026-04-21 04:39:06,202 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 06:40:09] 2026-04-21 04:39:06,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 06:40:09] 2026-04-21 04:39:06,222 | INFO     | did not find any defunct processes belonging to 4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:06,236 | INFO     | did not find any defunct processes belonging to 4051376
[2026-04-21 06:40:09] 2026-04-21 04:39:06,236 | INFO     | Ready for new job
[2026-04-21 06:40:09] 2026-04-21 04:39:06,238 | INFO     | **************************************
[2026-04-21 06:40:09] 2026-04-21 04:39:06,238 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 06:40:09] 2026-04-21 04:39:06,238 | INFO     | **************************************
[2026-04-21 06:40:09] 2026-04-21 04:39:06,238 | INFO     | 
[2026-04-21 06:40:09] 2026-04-21 04:39:06,244 | INFO     | architecture information:
[2026-04-21 06:40:09] 2026-04-21 04:39:06,244 | INFO     | executing command: cat /etc/os-release
[2026-04-21 06:40:09] 2026-04-21 04:39:06,261 | INFO     | cat /etc/os-release:
[2026-04-21 06:40:09] NAME="CentOS Linux"
[2026-04-21 06:40:09] VERSION="7 (Core)"
[2026-04-21 06:40:09] ID="centos"
[2026-04-21 06:40:09] ID_LIKE="rhel fedora"
[2026-04-21 06:40:09] VERSION_ID="7"
[2026-04-21 06:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 06:40:09] ANSI_COLOR="0;31"
[2026-04-21 06:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 06:40:09] HOME_URL="https://www.centos.org/"
[2026-04-21 06:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 06:40:09] 
[2026-04-21 06:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 06:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 06:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 06:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 06:40:09] 
[2026-04-21 06:40:09] 2026-04-21 04:39:06,262 | INFO     | **************************************
[2026-04-21 06:40:09] 2026-04-21 04:39:06,765 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-21 06:40:09] 2026-04-21 04:39:06,784 | INFO     | sufficient remaining disk space (201623339008 B)
[2026-04-21 06:40:09] 2026-04-21 04:39:06,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 06:40:09] 2026-04-21 04:39:06,784 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 06:40:09] 2026-04-21 04:39:06,784 | INFO     | update_server=False
[2026-04-21 06:40:09] 2026-04-21 04:39:06,785 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 06:40:09] 2026-04-21 04:39:07,237 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 06:40:09] 2026-04-21 04:39:07,237 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 06:40:09] 2026-04-21 04:39:07,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 06:40:09] 2026-04-21 04:39:07,238 | INFO     | will abort loop
[2026-04-21 06:40:09] 2026-04-21 04:39:07,527 | INFO     | all data control threads have been joined
[2026-04-21 06:40:09] 2026-04-21 04:39:07,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 06:40:09] 2026-04-21 04:39:07,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 06:40:09] 2026-04-21 04:39:07,737 | INFO     | all payload control threads have been joined
[2026-04-21 06:40:09] 2026-04-21 04:39:07,790 | INFO     | [job] retrieve thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:07,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:07,842 | INFO     | all job control threads have been joined
[2026-04-21 06:40:09] 2026-04-21 04:39:08,243 | INFO     | [job] job monitor thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,337 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,519 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,533 | INFO     | [data] control thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,533 | INFO     | [payload] failed_post thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,620 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,743 | INFO     | [payload] control thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,809 | INFO     | [data] copytool_in thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:08,847 | INFO     | [job] control thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:09,217 | INFO     | [job] validate thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:09,318 | INFO     | [payload] validate_post thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:09,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 06:40:09] 2026-04-21 04:39:09,685 | INFO     | [data] copytool_out thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:10,613 | INFO     | [job] queue monitor thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:11,636 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 06:40:09] 2026-04-21 04:39:36,930 | INFO     | PID=4046152 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 06:40:09] 2026-04-21 04:39:36,932 | INFO     | .. there are 8 such processes running
[2026-04-21 06:40:09] 2026-04-21 04:39:36,932 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 06:40:09] 2026-04-21 04:39:36,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 06:40:09] 2026-04-21 04:39:36,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 06:40:09] 2026-04-21 04:40:02,570 | INFO     | [monitor] cgroup control has ended
[2026-04-21 06:40:09] 2026-04-21 04:40:03,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23243775076160)>', '<ExcThread(monitor, started 23243540154112)>']
[2026-04-21 06:40:09] 2026-04-21 04:40:04,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 06:40:09] 2026-04-21 04:40:04,066 | INFO     | [monitor] control thread has ended
[2026-04-21 06:40:09] 2026-04-21 04:40:08,821 | INFO     | all workflow threads have been joined
[2026-04-21 06:40:09] 2026-04-21 04:40:08,821 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 06:40:09] 2026-04-21 04:40:08,821 | INFO     | traces error code: 0
[2026-04-21 06:40:09] 2026-04-21 04:40:08,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 06:40:09] 2026-04-21 04:40:08,983 [wrapper] ==== pilot stdout END ====
[2026-04-21 06:40:09] 2026-04-21 04:40:08,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 06:40:09] 2026-04-21 04:40:08,989 [wrapper] pilotpid: 4046152
[2026-04-21 06:40:09] 2026-04-21 04:40:08,991 [wrapper] Pilot exit status: 0
[2026-04-21 06:40:09] 2026-04-21 04:40:09,001 [wrapper] pandaids: 7101002127
[2026-04-21 06:40:09] 2026-04-21 04:40:09,119 [wrapper] cleanup supervisor_pilot  137681 4046153
[2026-04-21 06:40:09] 2026-04-21 04:40:09,122 [wrapper] Test setup, not cleaning
[2026-04-21 06:40:09] 2026-04-21 04:40:09,125 [wrapper] apfmon messages muted
[2026-04-21 06:40:09] 2026-04-21 04:40:09,128 [wrapper] ==== wrapper stdout END ====
[2026-04-21 06:40:09] 2026-04-21 04:40:09,131 [wrapper] ==== wrapper stderr END ====
[2026-04-21 06:40:09]  *** Error codes and diagnostics ***
[2026-04-21 06:40:09]     "exeErrorCode": 0,
[2026-04-21 06:40:09]     "pilotErrorCode": 0,
[2026-04-21 06:40:09]  *** Listing of results directory ***
[2026-04-21 06:40:09] total 2455696
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc     644190 Apr 18 13:57 pilot3.tar.gz
[2026-04-21 06:40:09] -rwx------. 1 boinc boinc      36322 Apr 18 14:01 runpilot2-wrapper.sh
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc       5094 Apr 18 14:20 queuedata.json
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc        100 Apr 21 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 06:40:09] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 03:26 run_atlas
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc        105 Apr 21 03:26 job.xml
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc 2239880546 Apr 21 03:26 EVNT.49820242._000004.pool.root.1
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc       6538 Apr 21 03:26 init_data.xml
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc      15665 Apr 21 03:26 start_atlas.sh
[2026-04-21 06:40:09] drwxrwx--x. 2 boinc boinc       4096 Apr 21 03:26 shared
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc     656896 Apr 21 03:26 input.tar.gz
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc          0 Apr 21 03:26 boinc_lockfile
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc       2548 Apr 21 03:26 pandaJob.out
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc     996231 Apr 21 03:26 agis_schedconf.cvmfs.json
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc        439 Apr 21 03:26 workernode_map.json
[2026-04-21 06:40:09] drwx------. 5 boinc boinc       4096 Apr 21 03:26 pilot3
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc  267866313 Apr 21 06:38 HITS.49820244._000389.pool.root.1
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc        489 Apr 21 06:38 boinc_task_state.xml
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc       1039 Apr 21 06:38 memory_monitor_summary.json
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc         95 Apr 21 06:38 pilot_heartbeat.json
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc    1512404 Apr 21 06:38 agis_ddmendpoints.agis.ALL.json
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc     342288 Apr 21 06:38 log.49820244._000389.job.log.tgz.1
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc       6363 Apr 21 06:39 heartbeat_new.json
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc       6254 Apr 21 06:39 heartbeat.json
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc         28 Apr 21 06:39 wrapper_checkpoint.txt
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc       8192 Apr 21 06:39 boinc_mmap_file
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc       5014 Apr 21 06:40 pilotlog.txt
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc    1068888 Apr 21 06:40 log.49820244._000389.job.log.1
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc        357 Apr 21 06:40 output.list
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc        410 Apr 21 06:40 runtime_log
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc    1433600 Apr 21 06:40 result.tar.gz
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc       8827 Apr 21 06:40 runtime_log.err
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc        664 Apr 21 06:40 72a867ae0fdb.diag
[2026-04-21 06:40:09] -rw-r--r--. 1 boinc boinc      21062 Apr 21 06:40 stderr.txt
[2026-04-21 06:40:09] HITS file was successfully produced:
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc 267866313 Apr 21 06:38 shared/HITS.pool.root.1
[2026-04-21 06:40:09]  *** Contents of shared directory: ***
[2026-04-21 06:40:09] total 2451044
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc 2239880546 Apr 21 03:26 ATLAS.root_0
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc      15665 Apr 21 03:26 start_atlas.sh
[2026-04-21 06:40:09] -rw-r--r--. 2 boinc boinc     656896 Apr 21 03:26 input.tar.gz
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc  267866313 Apr 21 06:38 HITS.pool.root.1
[2026-04-21 06:40:09] -rw-------. 1 boinc boinc    1433600 Apr 21 06:40 result.tar.gz
06:40:10 (4042087): run_atlas exited; CPU time 45094.130136
06:40:10 (4042087): called boinc_finish(0)

</stderr_txt>
]]>

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